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The map label for this gene is hslV [H]

Identifier: 17544762

GI number: 17544762

Start: 46926

End: 47462

Strand: Reverse

Name: hslV [H]

Synonym: RSc0043

Alternate gene names: 17544762

Gene position: 47462-46926 (Counterclockwise)

Preceding gene: 17544763

Following gene: 17544761

Centisome position: 1.28

GC content: 67.41

Gene sequence:

>537_bases
ATGGAACAGTATCACGGCACCACCATCGTCAGCGTGCGGCGCGGCAACCAGGTCGCGCTCGGCGGCGACGGCCAGGTCAC
GCTGGGCAACATCGTGATGAAGGGCACGGCCCGCAAGGTGCGCACCATTTACGACGGCAAGGTGCTGGTGGGCTTTGCCG
GCGCCACGGCCGACGCGTTCTCGCTGCTGGACCGCTTCGAGGCCAAGCTGCAGAAATACCAGGGCCACCTGCTGCGCGCC
GCCGTCGACCTCGCCAAGGACTGGCGCACCGACCGCGCGCTGCGCCACCTCGAGGCCATGCTGATCGTCGCCGACCGCGA
ATCGACGCTGGTCATCACCGGCAACGGCGACGTGCTGGACCCGGAAGGCGGCATCGCCGCGATCGGCTCGGGCGGCGCGT
ACGCGCAGTCGGCGGCCAAGGCGCTGATGGAGAACACCGAGCTTGCGCCGCGCGACGTGGTGGAGAAATCGCTGAGGATC
GCCGGCGAGCTCTGCATCTACACCAACACCAATTTCGTGATCGAGACGCTGGAATAA

Upstream 100 bases:

>100_bases
GGGAATCGAGGCTTGAAATCCTGACGGCCGGCGTCAAGTATGGGACGCTTTGACCAGCCCGCTGGGGGCCCGGTCTTTGC
AGGACCCAAGGAACAAGCGC

Downstream 100 bases:

>100_bases
GCCCGGCTCGACCGCACGCATCGACAGAACATCCATGCCCGAGACCATGACCCCGTCGGAAATCGTTTCCGAACTCGACA
AGCACATCATCGGCCAGCAG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSLLDRFEAKLQKYQGHLLRA
AVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRI
AGELCIYTNTNFVIETLE

Sequences:

>Translated_178_residues
MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSLLDRFEAKLQKYQGHLLRA
AVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRI
AGELCIYTNTNFVIETLE
>Mature_178_residues
MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSLLDRFEAKLQKYQGHLLRA
AVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRI
AGELCIYTNTNFVIETLE

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=171, Percent_Identity=63.7426900584795, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19135; Mature: 19135

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAF
CCCCCCCEEEEEECCCEEEECCCCCEEEEEEEEECCCHHEEEEECCEEEEEECCCCHHHH
SLLDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEC
PEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE
CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCEEEEECC
>Mature Secondary Structure
MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAF
CCCCCCCEEEEEECCCEEEECCCCCEEEEEEEEECCCHHEEEEECCEEEEEECCCCHHHH
SLLDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEC
PEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE
CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA