| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544755
Identifier: 17544755
GI number: 17544755
Start: 40687
End: 40929
Strand: Direct
Name: 17544755
Synonym: RSc0036
Alternate gene names: NA
Gene position: 40687-40929 (Clockwise)
Preceding gene: 17544754
Following gene: 17544758
Centisome position: 1.09
GC content: 80.66
Gene sequence:
>243_bases ATGGCCGCGCCGGCCCCCGTCCTCGCCGCGCCGGGGCAGCCGGCGCTGGCCAATGCGGTCTGCGCGGCCTGCGGGGCGGC GCTGCGCTGCGGGGCCATCGGCGACGGCATGCAGCCGGACGCCGCCTGCTGGTGCCGGCTCGAAAAGCACCTGCCGGCCG GTGCGTTGCAGTCCGGCCAGGGCTGCCTGTGCCCGCGCTGCCTGCGCGAGGCGATCGCGCGGGCCGGGGCGGCGCGCGGC TGA
Upstream 100 bases:
>100_bases CGTGCGATGCGTGTACCCGGTTCTCGTACCAGATGCGCTTCCTGCGGCAGGCGATGCATCGGCTGGGCCACGAAGACGAC GCCGAGGGCGGTCCGCGCTG
Downstream 100 bases:
>100_bases GCCGGCGGCGAGACGGTGCCGATGGCCGGCGCCCGTTTCGCCTATTCCTTGTCGTCTTCGTTCATCGTGCGTAGCGCGCG GCGCACATCGGCGCGGCCGC
Product: signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MAAPAPVLAAPGQPALANAVCAACGAALRCGAIGDGMQPDAACWCRLEKHLPAGALQSGQGCLCPRCLREAIARAGAARG
Sequences:
>Translated_80_residues MAAPAPVLAAPGQPALANAVCAACGAALRCGAIGDGMQPDAACWCRLEKHLPAGALQSGQGCLCPRCLREAIARAGAARG >Mature_79_residues AAPAPVLAAPGQPALANAVCAACGAALRCGAIGDGMQPDAACWCRLEKHLPAGALQSGQGCLCPRCLREAIARAGAARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7840; Mature: 7709
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 10.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAPVLAAPGQPALANAVCAACGAALRCGAIGDGMQPDAACWCRLEKHLPAGALQSGQ CCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC GCLCPRCLREAIARAGAARG CCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure AAPAPVLAAPGQPALANAVCAACGAALRCGAIGDGMQPDAACWCRLEKHLPAGALQSGQ CCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC GCLCPRCLREAIARAGAARG CCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA