| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is metX [H]
Identifier: 17544746
GI number: 17544746
Start: 31089
End: 32300
Strand: Reverse
Name: metX [H]
Synonym: RSc0027
Alternate gene names: 17544746
Gene position: 32300-31089 (Counterclockwise)
Preceding gene: 17544747
Following gene: 17544745
Centisome position: 0.87
GC content: 68.23
Gene sequence:
>1212_bases ATGACAGAACTCCAGGTGGATCCCGCCGCTTCCGCAGATCCGGCGGCCGCTGCCGACACACCCCGGCATCCCGCCGCCAC GCTGCCGCCCGACTCGGTCGGGCTGGTGGTACCCGAGCGCATGCACTTCGCCGAGCCGCTGCCGCTGCGCAACGGCTCGC AGCTCGTCGGCTACGACCTGATGGTCGAGACCTACGGCACGCTCAATGCCGAGCGCTCCAACGCCGTGCTCATCTGCCAC GCGCTCAACGCCTCGCACCACGTGGCGGGCGTGCATGCCGAGGGCGAGGTCGGCTGGTGGGACAACATGGTCGGGCCGGG CAAGCCGGTCGACACCAACCGCTTCTTCGTCATCGGCGTCAACAACCTCGGCTCGTGCTTCGGCTCGACCGGCCCGATGA GCCCGCATCCGCAAACCGGCCAGCCCTACGGCGCGCGCTTCCCGGTGGTCACGGTGGAAGACTGGGTCAACGCCCAGGCG CGCGTGGCCGACCGCTTCGGCATCCGCCAGTTCGCGGCGGTAATGGGCGGCAGCCTCGGCGGCATGCAGGCCCTGGCGTG GAGCCTGATGTACCCGGAGCGCGTGCGGCACTGCGTGGTGGTGGCGTCGACGCCGAAGCTCTCGGCGCAGAACATCGCGT TCAACGAAGTGGCGCGCAGCGCGATCCTGTCCGACCCTGATTTCCACGGCGGCGACTACTACGCGCACAACGTCAAACCC AAGCGCGGCCTGCGCGTGGCGCGCATGATCGGCCACATCACCTACCTGTCGGACGAGGACATGGCCGAGAAATTCGGCCG CGAGCTCAAGGCCGAAGACATCCGCTTCTCGTTCGACGTCGAGTTCCAGGTGGAAAGCTACCTGCGCTACCAGGGCGACA AGTTCGCCGAATACTTCGACGCCAACACCTACCTGCTGATCACGCGCGCGCTCGACTACTTCGACCCGGCACTGGCCTAT GAGGGCAGCCTGACCCGCGCCGTGGCGCACACGCGGGCCAGCTACCTCGTCGTCAGCTTCACCACCGACTGGCGCTTCGC CCCCGCGCGCAGCCGCGAACTGGTCAAGGCGCTGCTCGACAACAAGCGCCCCGTCACCTACGGCGAGATCGACGCGCCGC ACGGCCACGACGCCTTCCTGCTGGAAGACGCGCGCTACCACGCGCTGGTGCGCGCCTATTACGAACGCATCGCCCAGGAG ATCGGCGCATGA
Upstream 100 bases:
>100_bases AGAGGTTCGGTCAGAACGGGGGCATGAGTCCGCCGTGCGCCACACAGAGCCCGATTGGTTGCGTTGTCAGCGTTGCCGGT CGGGTTTTTTCTTTGGCGCC
Downstream 100 bases:
>100_bases CCCCGCAAACGCTCAACGCCATCGCCGCCGCATCGACGGCCGCGGCGGTGCCCGACATCCTGGCCGACCGCGCCGACTTC CGCGCCATCGCCCGCTGGAT
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTELQVDPAASADPAAAADTPRHPAATLPPDSVGLVVPERMHFAEPLPLRNGSQLVGYDLMVETYGTLNAERSNAVLICH ALNASHHVAGVHAEGEVGWWDNMVGPGKPVDTNRFFVIGVNNLGSCFGSTGPMSPHPQTGQPYGARFPVVTVEDWVNAQA RVADRFGIRQFAAVMGGSLGGMQALAWSLMYPERVRHCVVVASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHNVKP KRGLRVARMIGHITYLSDEDMAEKFGRELKAEDIRFSFDVEFQVESYLRYQGDKFAEYFDANTYLLITRALDYFDPALAY EGSLTRAVAHTRASYLVVSFTTDWRFAPARSRELVKALLDNKRPVTYGEIDAPHGHDAFLLEDARYHALVRAYYERIAQE IGA
Sequences:
>Translated_403_residues MTELQVDPAASADPAAAADTPRHPAATLPPDSVGLVVPERMHFAEPLPLRNGSQLVGYDLMVETYGTLNAERSNAVLICH ALNASHHVAGVHAEGEVGWWDNMVGPGKPVDTNRFFVIGVNNLGSCFGSTGPMSPHPQTGQPYGARFPVVTVEDWVNAQA RVADRFGIRQFAAVMGGSLGGMQALAWSLMYPERVRHCVVVASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHNVKP KRGLRVARMIGHITYLSDEDMAEKFGRELKAEDIRFSFDVEFQVESYLRYQGDKFAEYFDANTYLLITRALDYFDPALAY EGSLTRAVAHTRASYLVVSFTTDWRFAPARSRELVKALLDNKRPVTYGEIDAPHGHDAFLLEDARYHALVRAYYERIAQE IGA >Mature_402_residues TELQVDPAASADPAAAADTPRHPAATLPPDSVGLVVPERMHFAEPLPLRNGSQLVGYDLMVETYGTLNAERSNAVLICHA LNASHHVAGVHAEGEVGWWDNMVGPGKPVDTNRFFVIGVNNLGSCFGSTGPMSPHPQTGQPYGARFPVVTVEDWVNAQAR VADRFGIRQFAAVMGGSLGGMQALAWSLMYPERVRHCVVVASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHNVKPK RGLRVARMIGHITYLSDEDMAEKFGRELKAEDIRFSFDVEFQVESYLRYQGDKFAEYFDANTYLLITRALDYFDPALAYE GSLTRAVAHTRASYLVVSFTTDWRFAPARSRELVKALLDNKRPVTYGEIDAPHGHDAFLLEDARYHALVRAYYERIAQEI GA
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=234, Percent_Identity=37.1794871794872, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR008220 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =2.3.1.31 [H]
Molecular weight: Translated: 44507; Mature: 44375
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELQVDPAASADPAAAADTPRHPAATLPPDSVGLVVPERMHFAEPLPLRNGSQLVGYDL CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCEEEEEEE MVETYGTLNAERSNAVLICHALNASHHVAGVHAEGEVGWWDNMVGPGKPVDTNRFFVIGV EEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC NNLGSCFGSTGPMSPHPQTGQPYGARFPVVTVEDWVNAQARVADRFGIRQFAAVMGGSLG CCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCC GMQALAWSLMYPERVRHCVVVASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHNVKP HHHHHHHHHCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCC KRGLRVARMIGHITYLSDEDMAEKFGRELKAEDIRFSFDVEFQVESYLRYQGDKFAEYFD HHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEEEEEEEHHHHHHHCCCHHHHHHC ANTYLLITRALDYFDPALAYEGSLTRAVAHTRASYLVVSFTTDWRFAPARSRELVKALLD CCEEEEEEEHHHHCCHHHHCCCCHHHHHHHCCCEEEEEEEECCCEECCHHHHHHHHHHHC NKRPVTYGEIDAPHGHDAFLLEDARYHALVRAYYERIAQEIGA CCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TELQVDPAASADPAAAADTPRHPAATLPPDSVGLVVPERMHFAEPLPLRNGSQLVGYDL CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCEEEEEEE MVETYGTLNAERSNAVLICHALNASHHVAGVHAEGEVGWWDNMVGPGKPVDTNRFFVIGV EEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC NNLGSCFGSTGPMSPHPQTGQPYGARFPVVTVEDWVNAQARVADRFGIRQFAAVMGGSLG CCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCC GMQALAWSLMYPERVRHCVVVASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHNVKP HHHHHHHHHCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCC KRGLRVARMIGHITYLSDEDMAEKFGRELKAEDIRFSFDVEFQVESYLRYQGDKFAEYFD HHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEEEEEEEHHHHHHHCCCHHHHHHC ANTYLLITRALDYFDPALAYEGSLTRAVAHTRASYLVVSFTTDWRFAPARSRELVKALLD CCEEEEEEEHHHHCCHHHHCCCCHHHHHHHCCCEEEEEEEECCCEECCHHHHHHHHHHHC NKRPVTYGEIDAPHGHDAFLLEDARYHALVRAYYERIAQEIGA CCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA