BacMap

Definition	Ralstonia solanacearum GMI1000, complete genome.
Accession	NC_003295
Length	3,716,413

Click here to switch to the map view.

The map label for this gene is gabD1 [H]

Identifier: 17544747

GI number: 17544747

Start: 32580

End: 34073

Strand: Reverse

Name: gabD1 [H]

Synonym: RSc0028

Alternate gene names: 17544747

Gene position: 34073-32580 (Counterclockwise)

Preceding gene: 17544748

Following gene: 17544746

Centisome position: 0.92

GC content: 71.75

Gene sequence:

>1494_bases
ATGACCCGCACCGATCTGCCACCGGCACCGATCACGCTCAACGACCCGGCGCTGTGGCGCACGCAAGCCTTCCTGGCCGG
CGCGTGGACCGATGCCGATGACGGCAGCACCCGCGACGTGACCGACCCCGCCACCGGCCGCGTGATCGGCACGGTGCCCG
CGATGGGCGCCGCGGAGACGCGCCGCGCCATCGAGGCCGCGCAGGCCGCGCAGCGCGCCTGGCGCAAGGTGACCGCGCGC
GAGCGCGCCCGGATCCTGCGCAAGCTGGCCGACCTGATGCTGGAGCACCAGCAGGACCTGGCCCGCATCCTGACCGCCGA
GCAGGGCAAGCCGCTGCCCGAGGCCACGGGCGAGATCGCCTATGCCGCCTCGTTCATCGAGTGGTTTGCCGAAGAGGCCC
GCCGCGTCTACGGCGACACCATCCCCGCGCCGCAGGGCGACCGCCGGATCGTCGTCAACAAGGAACCGATCGGGGTGACG
GCGGCGATCACGCCGTGGAACTTCCCCATCGCGATGATGACGCGCAAGGTCGGCCCGGCGCTGGCGGCCGGCTGCGCGAT
GGTGGTCAAGCCCGCGCTGGAGACACCTTACTCCGCGCTGGCCTTCGCGGAACTGGCCGCGCGCGCGGGCGTGCCGGCGG
GGCTGCTGTCCATCGTCACCGGCGACGCGCAGGGCATCGGCGGCGAGCTGACCGCCAACCCCGTCGTGCGCAAGCTGAGC
TTCACCGGCTCCACGGCCGTCGGCCGCCTGCTGATGCGCCAGTGCGCCGACGACGTGAAGAAGCTGTCGCTGGAGCTGGG
CGGCAACGCGCCCTTCATCGTGTTCGACGATGCCGATCTCGATGCCGCCGTGGAAGGCGCGATGGTGGCCAAATACCGCA
ACGCCGGCCAGACCTGCGTGTGCGCCAACCGCTTCTACGTGCAGCGCGGCATCTATGACGCCTTCGCCGCCAGGCTGAGC
GAGGCCGTGCGCGCGCTGCGCGTGGGCAACGGTGCCGAGCCGGGCGTGCAGCAGGGCCCGCTGATCCACCAGCGCGCGAT
GGACAAGGTGCGCGCCCACGTGGACAACGCCGTCGCGCAGGGCGCCCGCGTGCTCGTCGGCGGCAAGCCGCATGCGCTGT
CGGCCCAGGGCGGGGCCTTCTTCGAGCCGACCGTCATCGTGGATGCCCGGCCCGGCATGCTGGTCGCGCACGAGGAGACC
TTCGGCCCGCTGGCCGCGCTGATCCCGTTCGACACCGAAGACGAAGCCGTGGCCGCCGCCAACGACACCGAGTTCGGCCT
GGCCGCGTATTTCTACACGCGCGACCTGGGCCGCGCGTGGCGCGTGTCGGAAGCGCTGGAGAGCGGCATGGTCGGCGTCA
ACACCGGATTGATCTCGACGGCCGAGGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTGGGCCGCGAAGGCTCCAAGTAC
GGCATCGACGAGTACCTGGAGATCAAGTACGTCTGCATGGCCGGGCTCGGCTGA

Upstream 100 bases:

>100_bases
TACGGCAACGTGATCCGCTTCCTGTTCCCGCTCACCATCGAAGACGCGGTATTCGAAGAGGGCCTTGCCATCCTGAAACA
CGCACTGGAGGGCTGACACC

Downstream 100 bases:

>100_bases
GCCCGGGCGGGCGCGGGACGCATCGGGCGCATCAACCCATGGTGATGCGTCCGCCCCCGCTTGCTCTATAATCCCCACTT
CCTGACGCGCCGATTTGACG

Product: succinate-semialdehyde dehydrogenase oxidoreductase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAETRRAIEAAQAAQRAWRKVTAR
ERARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIAYAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVT
AAITPWNFPIAMMTRKVGPALAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLS
FTGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCVCANRFYVQRGIYDAFAARLS
EAVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQGARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEET
FGPLAALIPFDTEDEAVAAANDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY
GIDEYLEIKYVCMAGLG

Sequences:

>Translated_497_residues
MTRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAETRRAIEAAQAAQRAWRKVTAR
ERARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIAYAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVT
AAITPWNFPIAMMTRKVGPALAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLS
FTGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCVCANRFYVQRGIYDAFAARLS
EAVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQGARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEET
FGPLAALIPFDTEDEAVAAANDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY
GIDEYLEIKYVCMAGLG
>Mature_496_residues
TRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAETRRAIEAAQAAQRAWRKVTARE
RARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIAYAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVTA
AITPWNFPIAMMTRKVGPALAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLSF
TGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCVCANRFYVQRGIYDAFAARLSE
AVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQGARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEETF
GPLAALIPFDTEDEAVAAANDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKYG
IDEYLEIKYVCMAGLG

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=484, Percent_Identity=58.0578512396694, Blast_Score=542, Evalue=1e-154,
Organism=Homo sapiens, GI25777721, Length=497, Percent_Identity=56.3380281690141, Blast_Score=531, Evalue=1e-151,
Organism=Homo sapiens, GI238814322, Length=481, Percent_Identity=38.045738045738, Blast_Score=339, Evalue=3e-93,
Organism=Homo sapiens, GI21614513, Length=479, Percent_Identity=38.4133611691023, Blast_Score=332, Evalue=6e-91,
Organism=Homo sapiens, GI25777730, Length=491, Percent_Identity=38.4928716904277, Blast_Score=323, Evalue=2e-88,
Organism=Homo sapiens, GI21361176, Length=496, Percent_Identity=37.0967741935484, Blast_Score=322, Evalue=3e-88,
Organism=Homo sapiens, GI115387104, Length=465, Percent_Identity=38.2795698924731, Blast_Score=322, Evalue=5e-88,
Organism=Homo sapiens, GI25777732, Length=491, Percent_Identity=37.2708757637475, Blast_Score=318, Evalue=5e-87,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=36.25, Blast_Score=318, Evalue=7e-87,
Organism=Homo sapiens, GI25777724, Length=498, Percent_Identity=36.3453815261044, Blast_Score=317, Evalue=2e-86,
Organism=Homo sapiens, GI153266822, Length=495, Percent_Identity=36.969696969697, Blast_Score=315, Evalue=9e-86,
Organism=Homo sapiens, GI25777728, Length=417, Percent_Identity=38.3693045563549, Blast_Score=287, Evalue=2e-77,
Organism=Homo sapiens, GI25777726, Length=495, Percent_Identity=34.5454545454545, Blast_Score=276, Evalue=4e-74,
Organism=Homo sapiens, GI25952152, Length=480, Percent_Identity=32.0833333333333, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=40.1433691756272, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI310128093, Length=453, Percent_Identity=30.9050772626932, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI310128103, Length=454, Percent_Identity=30.6167400881057, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI188035924, Length=454, Percent_Identity=30.6167400881057, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI11095441, Length=475, Percent_Identity=27.7894736842105, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI310128091, Length=392, Percent_Identity=31.3775510204082, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI223972651, Length=466, Percent_Identity=29.3991416309013, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI310128089, Length=328, Percent_Identity=32.9268292682927, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=35.9375, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI73466520, Length=340, Percent_Identity=27.0588235294118, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI4557303, Length=340, Percent_Identity=27.0588235294118, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI206597441, Length=435, Percent_Identity=26.2068965517241, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597439, Length=435, Percent_Identity=26.2068965517241, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI22907049, Length=435, Percent_Identity=26.2068965517241, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI73695881, Length=338, Percent_Identity=28.9940828402367, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI73695879, Length=338, Percent_Identity=28.9940828402367, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI310128087, Length=454, Percent_Identity=26.6519823788546, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI4502043, Length=436, Percent_Identity=28.8990825688073, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI238814371, Length=436, Percent_Identity=28.8990825688073, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI71773324, Length=336, Percent_Identity=29.4642857142857, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI310128095, Length=315, Percent_Identity=31.1111111111111, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI238859541, Length=436, Percent_Identity=27.0642201834862, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI25777736, Length=436, Percent_Identity=27.0642201834862, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI25777734, Length=436, Percent_Identity=27.0642201834862, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI223972653, Length=466, Percent_Identity=25.9656652360515, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI310128099, Length=211, Percent_Identity=27.0142180094787, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI310128101, Length=211, Percent_Identity=27.0142180094787, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI1789015, Length=483, Percent_Identity=65.0103519668737, Blast_Score=657, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=457, Percent_Identity=39.6061269146608, Blast_Score=338, Evalue=5e-94,
Organism=Escherichia coli, GI87081896, Length=462, Percent_Identity=38.7445887445887, Blast_Score=317, Evalue=9e-88,
Organism=Escherichia coli, GI1786504, Length=475, Percent_Identity=38.3157894736842, Blast_Score=305, Evalue=4e-84,
Organism=Escherichia coli, GI1787715, Length=460, Percent_Identity=38.2608695652174, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI1787558, Length=476, Percent_Identity=34.8739495798319, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=34.4444444444444, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI87082295, Length=484, Percent_Identity=33.2644628099174, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788042, Length=464, Percent_Identity=33.1896551724138, Blast_Score=188, Evalue=9e-49,
Organism=Escherichia coli, GI1787250, Length=455, Percent_Identity=28.5714285714286, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1787653, Length=437, Percent_Identity=26.5446224256293, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534119, Length=469, Percent_Identity=45.4157782515991, Blast_Score=412, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI133930964, Length=496, Percent_Identity=38.9112903225806, Blast_Score=340, Evalue=7e-94,
Organism=Caenorhabditis elegans, GI25144435, Length=478, Percent_Identity=37.2384937238494, Blast_Score=312, Evalue=3e-85,
Organism=Caenorhabditis elegans, GI25143876, Length=490, Percent_Identity=35.3061224489796, Blast_Score=310, Evalue=1e-84,
Organism=Caenorhabditis elegans, GI17562198, Length=477, Percent_Identity=36.6876310272537, Blast_Score=309, Evalue=2e-84,
Organism=Caenorhabditis elegans, GI25143874, Length=490, Percent_Identity=35.3061224489796, Blast_Score=309, Evalue=2e-84,
Organism=Caenorhabditis elegans, GI71995606, Length=459, Percent_Identity=38.3442265795207, Blast_Score=293, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI32564736, Length=417, Percent_Identity=38.3693045563549, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=37.7403846153846, Blast_Score=261, Evalue=9e-70,
Organism=Caenorhabditis elegans, GI17551164, Length=459, Percent_Identity=32.4618736383442, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI115534176, Length=472, Percent_Identity=30.5084745762712, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI71986308, Length=473, Percent_Identity=29.5983086680761, Blast_Score=198, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI25146391, Length=348, Percent_Identity=30.7471264367816, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI32566756, Length=348, Percent_Identity=30.7471264367816, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI25146394, Length=348, Percent_Identity=30.7471264367816, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17564084, Length=439, Percent_Identity=27.5626423690205, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17534447, Length=448, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI32564151, Length=402, Percent_Identity=28.1094527363184, Blast_Score=131, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI115532534, Length=343, Percent_Identity=28.8629737609329, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71990744, Length=284, Percent_Identity=27.8169014084507, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6319478, Length=488, Percent_Identity=47.5409836065574, Blast_Score=469, Evalue=1e-133,
Organism=Saccharomyces cerevisiae, GI6320917, Length=488, Percent_Identity=37.9098360655738, Blast_Score=331, Evalue=1e-91,
Organism=Saccharomyces cerevisiae, GI6325196, Length=491, Percent_Identity=37.2708757637475, Blast_Score=301, Evalue=1e-82,
Organism=Saccharomyces cerevisiae, GI6324950, Length=473, Percent_Identity=32.9809725158562, Blast_Score=280, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6323821, Length=498, Percent_Identity=32.9317269076305, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6323822, Length=498, Percent_Identity=32.9317269076305, Blast_Score=272, Evalue=8e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=28.9308176100629, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6321826, Length=462, Percent_Identity=24.025974025974, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323757, Length=410, Percent_Identity=23.4146341463415, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281362580, Length=484, Percent_Identity=52.0661157024793, Blast_Score=526, Evalue=1e-149,
Organism=Drosophila melanogaster, GI62472918, Length=484, Percent_Identity=52.0661157024793, Blast_Score=526, Evalue=1e-149,
Organism=Drosophila melanogaster, GI62472926, Length=484, Percent_Identity=52.0661157024793, Blast_Score=526, Evalue=1e-149,
Organism=Drosophila melanogaster, GI62472936, Length=484, Percent_Identity=52.0661157024793, Blast_Score=526, Evalue=1e-149,
Organism=Drosophila melanogaster, GI21356737, Length=484, Percent_Identity=52.0661157024793, Blast_Score=526, Evalue=1e-149,
Organism=Drosophila melanogaster, GI24650465, Length=480, Percent_Identity=38.3333333333333, Blast_Score=338, Evalue=6e-93,
Organism=Drosophila melanogaster, GI20129399, Length=493, Percent_Identity=38.1338742393509, Blast_Score=324, Evalue=9e-89,
Organism=Drosophila melanogaster, GI24585660, Length=479, Percent_Identity=35.4906054279749, Blast_Score=317, Evalue=1e-86,
Organism=Drosophila melanogaster, GI24638878, Length=476, Percent_Identity=27.7310924369748, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24638876, Length=476, Percent_Identity=27.7310924369748, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24666674, Length=454, Percent_Identity=28.6343612334802, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24668425, Length=434, Percent_Identity=25.3456221198157, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24668417, Length=434, Percent_Identity=25.3456221198157, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24668413, Length=434, Percent_Identity=25.3456221198157, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360301, Length=427, Percent_Identity=25.2927400468384, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281360299, Length=427, Percent_Identity=25.2927400468384, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360297, Length=427, Percent_Identity=25.2927400468384, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360295, Length=427, Percent_Identity=25.2927400468384, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24586250, Length=427, Percent_Identity=25.2927400468384, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360303, Length=427, Percent_Identity=24.5901639344262, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI45552499, Length=427, Percent_Identity=24.5901639344262, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28571798, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28571796, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28571794, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28571806, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28571802, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28571800, Length=431, Percent_Identity=23.6658932714617, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28574525, Length=451, Percent_Identity=24.6119733924612, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52691; Mature: 52559

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAET
CCCCCCCCCCEEECCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
RRAIEAAQAAQRAWRKVTARERARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHH
YAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVTAAITPWNFPIAMMTRKVGPA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCHH
LAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHEEE
FTGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCV
CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
CANRFYVQRGIYDAFAARLSEAVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEETFGPLAALIPFDTEDEAVAAA
CCEEEECCCCCEECCCCCCEECCEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCEEEC
NDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCC
GIDEYLEIKYVCMAGLG
CCCHHHHEEEEEECCCC
>Mature Secondary Structure 
TRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAET
CCCCCCCCCEEECCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
RRAIEAAQAAQRAWRKVTARERARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHH
YAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVTAAITPWNFPIAMMTRKVGPA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCHH
LAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHEEE
FTGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCV
CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
CANRFYVQRGIYDAFAARLSEAVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEETFGPLAALIPFDTEDEAVAAA
CCEEEECCCCCEECCCCCCEECCEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCEEEC
NDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCC
GIDEYLEIKYVCMAGLG
CCCHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]