Click here to switch to the map view.

The map label for this gene is 17232688

Identifier: 17232688

GI number: 17232688

Start: 6195033

End: 6196304

Strand: Reverse

Name: 17232688

Synonym: all5196

Alternate gene names: NA

Gene position: 6196304-6195033 (Counterclockwise)

Preceding gene: 17232698

Following gene: 17232687

Centisome position: 96.61

GC content: 44.5

Gene sequence:

>1272_bases
ATGAACAAATTGTTACCCCACTCTAGAATCATCGCCAGAACATCGGCTAGAATCACGTCTCATGAGGCTTGCAAATGCCG
TATTGCGTTGTATTCCCACGACACAATGGGTTTAGGACACAAACGCCGTAATTTATTGATTGCCCAAACTTTAGGATTTT
CACCCCTACAAACTGATATTTTAATGATTAGTGGCATTCCAGATGCCAGCAATTTACCAACACCACCAGGGGTAGATTGT
TTGACTCTTCCATCTCTGCATAAAAACATTGATGGGCAATATCAAGCCAGGAAACTGGATCTATCATTGCAGGAAATTAT
TGCATTGCGATCGCAAGTTATCCTCGCAACGATAAAAACCTTTAAACCGGATATCTTGATTGTGGATAATGTCCCACGGG
GCGCAGTCAGAGAACTAGATCCCACCTTAGAATACTTGCGTAGGGAAGGTAGAACCCATTGCATACTGGGTTTGCGCGAT
ATCTTAGATGAACCCGCTTCCGTGCGTCGAGATTGGAAACGAGCAGCCAATGAAGAAGCGATTCAAACCTATTATGATCA
AGTTTGGGTGTATGGCGATCGCAACATCTATGACCTAGCCAAAGAATATCACTTCCAGCCAAAAACCGCCGCCAAATTCC
GCTACACAGGCTATCTTGACCAACGCAACCGCCTCAAATATCTAAATTTAGACACCGTTCAATCATTTAAATCCCTCAAT
CTACCATCTGAACGCCTAGTATTATGCCTAGTAGGTGGTGGACAAGACGGAGCGCAGTTAGCAGAAACCTTTGCCCATGC
GGAACTACCACCAGGGATGAATGGTATAATCCTAACAGGCCCCTTCATGCCGCGAGAAGTCAGGCAAAAACTCCAGAACT
ATGCAGCGCAACGTGATAATTTGCGCGTGTTGGAATATTTAGCCGAGCCGACAATGTTACTCCATCAAGCCGAACGCGTG
ATTGCAATGGGTGGTTACAATACCACTTGTGAATTGTTGTCATTTGGTAAGCGATCGCTTATTTTACCCCGCGTCAAACC
CCGAAAAGAACAATTAATTCGGGCTGAACGATTAAAAAAACTAGGCTTAATTGATTTTCTACACCCAGATAAATTAACAT
CGGCTGCATTAACCGACTGGCTAAAGCTTGACATTGAACCACCACCAGTCCGTAAATACGTCGATCTCAAAGGACTAACC
CGCATTCCCCAATTCGTCCATGAAATCCTCATGTCTGCTCATCAAGAACCCCCACACGCAAAAGCTTCTTAA

Upstream 100 bases:

>100_bases
GTCCTCAATGTCATCTATGTAGTGTGTTCCCATGAATCATTGCGGATTGCTAGATAAAAACTAGATTAGATACCGTGTTA
AAAATTAGTCAGGAGTACAA

Downstream 100 bases:

>100_bases
ATAATCAACAGTCATAAGTCAACAGTTAACAAATATGCCCATGTCCGTCGCTTACGTCCTCAAACGTTATCCCCGCTATT
CTGAAACCTTTGTCGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyltransferase Protein; Glycosyltransferase Family; RedA-Like Protein; Glycosyl Transferase; Glycosyl Transferase-Like Protein; Glycosyl Transferase Family Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNKLLPHSRIIARTSARITSHEACKCRIALYSHDTMGLGHKRRNLLIAQTLGFSPLQTDILMISGIPDASNLPTPPGVDC
LTLPSLHKNIDGQYQARKLDLSLQEIIALRSQVILATIKTFKPDILIVDNVPRGAVRELDPTLEYLRREGRTHCILGLRD
ILDEPASVRRDWKRAANEEAIQTYYDQVWVYGDRNIYDLAKEYHFQPKTAAKFRYTGYLDQRNRLKYLNLDTVQSFKSLN
LPSERLVLCLVGGGQDGAQLAETFAHAELPPGMNGIILTGPFMPREVRQKLQNYAAQRDNLRVLEYLAEPTMLLHQAERV
IAMGGYNTTCELLSFGKRSLILPRVKPRKEQLIRAERLKKLGLIDFLHPDKLTSAALTDWLKLDIEPPPVRKYVDLKGLT
RIPQFVHEILMSAHQEPPHAKAS

Sequences:

>Translated_423_residues
MNKLLPHSRIIARTSARITSHEACKCRIALYSHDTMGLGHKRRNLLIAQTLGFSPLQTDILMISGIPDASNLPTPPGVDC
LTLPSLHKNIDGQYQARKLDLSLQEIIALRSQVILATIKTFKPDILIVDNVPRGAVRELDPTLEYLRREGRTHCILGLRD
ILDEPASVRRDWKRAANEEAIQTYYDQVWVYGDRNIYDLAKEYHFQPKTAAKFRYTGYLDQRNRLKYLNLDTVQSFKSLN
LPSERLVLCLVGGGQDGAQLAETFAHAELPPGMNGIILTGPFMPREVRQKLQNYAAQRDNLRVLEYLAEPTMLLHQAERV
IAMGGYNTTCELLSFGKRSLILPRVKPRKEQLIRAERLKKLGLIDFLHPDKLTSAALTDWLKLDIEPPPVRKYVDLKGLT
RIPQFVHEILMSAHQEPPHAKAS
>Mature_423_residues
MNKLLPHSRIIARTSARITSHEACKCRIALYSHDTMGLGHKRRNLLIAQTLGFSPLQTDILMISGIPDASNLPTPPGVDC
LTLPSLHKNIDGQYQARKLDLSLQEIIALRSQVILATIKTFKPDILIVDNVPRGAVRELDPTLEYLRREGRTHCILGLRD
ILDEPASVRRDWKRAANEEAIQTYYDQVWVYGDRNIYDLAKEYHFQPKTAAKFRYTGYLDQRNRLKYLNLDTVQSFKSLN
LPSERLVLCLVGGGQDGAQLAETFAHAELPPGMNGIILTGPFMPREVRQKLQNYAAQRDNLRVLEYLAEPTMLLHQAERV
IAMGGYNTTCELLSFGKRSLILPRVKPRKEQLIRAERLKKLGLIDFLHPDKLTSAALTDWLKLDIEPPPVRKYVDLKGLT
RIPQFVHEILMSAHQEPPHAKAS

Specific function: Unknown

COG id: COG4671

COG function: function code R; Predicted glycosyl transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48028; Mature: 48028

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLPHSRIIARTSARITSHEACKCRIALYSHDTMGLGHKRRNLLIAQTLGFSPLQTDI
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHCCEEEEECCCCCCCCCCE
LMISGIPDASNLPTPPGVDCLTLPSLHKNIDGQYQARKLDLSLQEIIALRSQVILATIKT
EEEECCCCCCCCCCCCCCCEEECCHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHH
FKPDILIVDNVPRGAVRELDPTLEYLRREGRTHCILGLRDILDEPASVRRDWKRAANEEA
CCCCEEEEECCCCCHHHHCCHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHCCHHH
IQTYYDQVWVYGDRNIYDLAKEYHFQPKTAAKFRYTGYLDQRNRLKYLNLDTVQSFKSLN
HHHHHHHEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHHHHCC
LPSERLVLCLVGGGQDGAQLAETFAHAELPPGMNGIILTGPFMPREVRQKLQNYAAQRDN
CCHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCC
LRVLEYLAEPTMLLHQAERVIAMGGYNTTCELLSFGKRSLILPRVKPRKEQLIRAERLKK
HHHHHHHHCHHHHHHHHHHEEEECCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHH
LGLIDFLHPDKLTSAALTDWLKLDIEPPPVRKYVDLKGLTRIPQFVHEILMSAHQEPPHA
CCCHHCCCCCHHHHHHHHHHHEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
KAS
CCC
>Mature Secondary Structure
MNKLLPHSRIIARTSARITSHEACKCRIALYSHDTMGLGHKRRNLLIAQTLGFSPLQTDI
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHCCEEEEECCCCCCCCCCE
LMISGIPDASNLPTPPGVDCLTLPSLHKNIDGQYQARKLDLSLQEIIALRSQVILATIKT
EEEECCCCCCCCCCCCCCCEEECCHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHH
FKPDILIVDNVPRGAVRELDPTLEYLRREGRTHCILGLRDILDEPASVRRDWKRAANEEA
CCCCEEEEECCCCCHHHHCCHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHCCHHH
IQTYYDQVWVYGDRNIYDLAKEYHFQPKTAAKFRYTGYLDQRNRLKYLNLDTVQSFKSLN
HHHHHHHEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHHHHCC
LPSERLVLCLVGGGQDGAQLAETFAHAELPPGMNGIILTGPFMPREVRQKLQNYAAQRDN
CCHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCC
LRVLEYLAEPTMLLHQAERVIAMGGYNTTCELLSFGKRSLILPRVKPRKEQLIRAERLKK
HHHHHHHHCHHHHHHHHHHEEEECCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHH
LGLIDFLHPDKLTSAALTDWLKLDIEPPPVRKYVDLKGLTRIPQFVHEILMSAHQEPPHA
CCCHHCCCCCHHHHHHHHHHHEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
KAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA