Click here to switch to the map view.

The map label for this gene is 17232668

Identifier: 17232668

GI number: 17232668

Start: 6174621

End: 6175028

Strand: Reverse

Name: 17232668

Synonym: all5176

Alternate gene names: NA

Gene position: 6175028-6174621 (Counterclockwise)

Preceding gene: 17232669

Following gene: 17232666

Centisome position: 96.28

GC content: 39.95

Gene sequence:

>408_bases
GTGACCATGAGTGAAAATTCCCATCGTAATCCAGATGATTTTGCTAATGAAGCATTTAACAATAATGGGCTGTGGGAATA
TGTACAATCAATGAGTCCTCAAACTGTTACCCAGTTATCTAAACCTGGTTCAAGAGAAGTCCTGCAATTAATTCAGCGTG
CTGTTGTGGCGACTTTGGGTAATTTACCTCATGAGCAATTTAACACAAATATTACTACCAGCCGCGAAGAGTTGAGTCAG
CTTTTAGGCGCTGCAATGGTAGATGGGTATTTCCTGCGTAATGTTGAACAGCGACTGGAGTTAGAGAAATCATTTTTTCC
TCTAGGTGATGAAACTCCAACTCATCTTTACTTAACAGCCGAAACTCCGGTAAATGATGAGTTGCAAGAACAAAACCAGG
AAAATTAA

Upstream 100 bases:

>100_bases
TATATAGGAGGATAACCTGTCTTTAAAAGTTCGGTTATGCGAACGAGGAGATAAGAATTAAATTGCTAAATTAGTGGATA
GTTGAGCAACATTTGAGATA

Downstream 100 bases:

>100_bases
TCGAGTAACGTTTGTTTGGGAGCTTTTTTATTGTGCTTCCCTGCGGGACGCTCCGCTTAACGCGGAGCTATGCCGAAGGC
TTTACGCGTGTCAGTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTMSENSHRNPDDFANEAFNNNGLWEYVQSMSPQTVTQLSKPGSREVLQLIQRAVVATLGNLPHEQFNTNITTSREELSQ
LLGAAMVDGYFLRNVEQRLELEKSFFPLGDETPTHLYLTAETPVNDELQEQNQEN

Sequences:

>Translated_135_residues
MTMSENSHRNPDDFANEAFNNNGLWEYVQSMSPQTVTQLSKPGSREVLQLIQRAVVATLGNLPHEQFNTNITTSREELSQ
LLGAAMVDGYFLRNVEQRLELEKSFFPLGDETPTHLYLTAETPVNDELQEQNQEN
>Mature_134_residues
TMSENSHRNPDDFANEAFNNNGLWEYVQSMSPQTVTQLSKPGSREVLQLIQRAVVATLGNLPHEQFNTNITTSREELSQL
LGAAMVDGYFLRNVEQRLELEKSFFPLGDETPTHLYLTAETPVNDELQEQNQEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15357; Mature: 15226

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSENSHRNPDDFANEAFNNNGLWEYVQSMSPQTVTQLSKPGSREVLQLIQRAVVATLG
CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NLPHEQFNTNITTSREELSQLLGAAMVDGYFLRNVEQRLELEKSFFPLGDETPTHLYLTA
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ETPVNDELQEQNQEN
CCCCCHHHHHCCCCC
>Mature Secondary Structure 
TMSENSHRNPDDFANEAFNNNGLWEYVQSMSPQTVTQLSKPGSREVLQLIQRAVVATLG
CCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NLPHEQFNTNITTSREELSQLLGAAMVDGYFLRNVEQRLELEKSFFPLGDETPTHLYLTA
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ETPVNDELQEQNQEN
CCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA