| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232612
Identifier: 17232612
GI number: 17232612
Start: 6116158
End: 6118122
Strand: Reverse
Name: 17232612
Synonym: all5120
Alternate gene names: NA
Gene position: 6118122-6116158 (Counterclockwise)
Preceding gene: 17232614
Following gene: 17232611
Centisome position: 95.39
GC content: 38.37
Gene sequence:
>1965_bases ATGCTGACTGGACTAGTCTTATTATCCTTAGTGATTCTTTGGCTGATTTTTCACAATTCTGAGCGAGATTGGCGTAGTGC TGTGTTATCAGCAGCAGTTTCCTGGGGTGTTCTAGTCACGATTTCCACGGAAGTTTTCAGCCTTTTGCGAATCATCACCT TTGGTTGGGTGCTAGCTTTGTGGTTGCTGGCTAATCTTGCTTTGGGATGGATTTACTATCGCCTCGTTAAAACAGGAAAG CGCACGCTCTTTTCCCCAAAACTTCCCTCAATCACTCCCGTTTCCTTAGTATTATTGGGTGGTGTAGCTTTTATTATTGC CACCATTACTATAATTGCGATCGTTGCTCCCCCAAATAACTGGGATTCCATGACTTATCACATGGCGCGGGTGGTGCATT GGATACAAAACCGTAGTCTGGCTCATTATCCTACCTACTACTCAGCCCAATTAGTTCACCCACCTTTTGCGGAGGTGGTG ATTTTACATCTGCAAATTTTGAGTGGGGGCGATCGCTTTGCCAATTTAGTACAAGTGTTTAGTATGATTGGTAGCATCAT CGGCGTATCATTAATTGCCCAGCAATTAGGAGCAGATAAGCGAGGACAGATTTTTGCTACCGTATTCTGTGCTACTCTCC CGATGGGTATTTTGCAAAGTTCTAGCACTCAAAACGATTATGCGGTTTGTTTTTGGCTAGTTTGTTTAGCCCATTTTGTG CTGTTGACTTTACCTGATAAAAATCCTCCCACGCACTTAGTCTTAAGTATTGGCGCCAGTTGTGGATTAGCCGTGTACAC AAAGAGTTCTGGTTATATCTTTGCTTTTCCCTTCATGGTTTGGTTATTTATCTGGTATGTCAACTCAATGCGCTGGAAAA TGTGGAAGTCAGGAGTGATTGTAGCTGCTATTTTCTTCACCTTAAATATCGGGCATTATTTACGTAATTTTGATTTATAT GGTAATCCTATATCAGCAGCAGAATACTCCAAAGAATACAAGATAGAAATATATAGCCTACCTACATGGATTTCTAATAT CATTCGTAATTTATCTTTGCATACAGATATTGTTAGACACTTAGGTTTGCAAAAAATTATAGAACCATTGACGGGTAAGC TAACTAAAATAATTACTATAATTCATGGCTTTTTAGGGGTGGATATGACCGACTCGCGGATAACCCATCCCCCCAACTCT TACAATGGTGTACCAGGGCTGTCTTTTGACGAAAATGTTGCGGGTAATCCTTTACATTTGTTACTGACTTTAATAGCTAT AGCCATATTTATCTTTCATAAAAGATTGAGGAGCAATAAAGAATTACTAGCTTATGTCTTATCTTTGGTTGCTGGCTTTT TACTGTTATGTTGGATGCTAAAATTGCAGCCATATCAAAGTCGTCATCATCTTTCTTTATTCGTACTGTTCTCTGCTTTT GTCGGCTTAGTTTTCTGCCAAGTCTGGAGCCGTTATTTTGTCACATTCTTAGCGGTGATTCTTTTAGTAACATCCATGCA GTTTGTGTTTATCAATAAATTCCGACCCATAGCAGCAGAAAATAATATTTTTAATACTAGTAGAAACGAACTTTACTTTA CTAATCGACCTCATCTGATCAATTCATATTTTGAGGCAACTAATTTTGTAAAAACTATACAATGTGAAAATATTGGACTT TCCTTGGGAACCGAACAAACTCCATCTGCCCGTTATTGGGAATATCCATTTTGGGTTCTATTAAATAATCAGCAGCAGCG AGTAATTAAGTTTGGACATATCTTAAACCCTACTAATTTTACTGCTGTGAAATCTCAAGTGTATCCACATAATCAATTTC AACCTTGTGGTATTATTGCCGTGAGAAGAGACGAAGAAGCGCCAGTAGAGTCAATGATTTTTAAAAATGTAAAATATACG AAAAAATTATTTTCTAAACCAGTGACTGTGTTGATGAAAGAGTAA
Upstream 100 bases:
>100_bases CGATGAGTTAATATCTTAGCAATAAGTATAATAGGCGTTGATTATACATAGATTTTACTGATAATTACTCAACTTGAGGC GTTAGGTGTGAGGTTCCAAT
Downstream 100 bases:
>100_bases AGATAGTTATGTAATGAAATCAATGAATCAAAACGGTGTTAGCGATCGCCTTCCTTAGTCAAAAACAGATCGATGAACGG GACTGCGTTCATCAGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 654; Mature: 654
Protein sequence:
>654_residues MLTGLVLLSLVILWLIFHNSERDWRSAVLSAAVSWGVLVTISTEVFSLLRIITFGWVLALWLLANLALGWIYYRLVKTGK RTLFSPKLPSITPVSLVLLGGVAFIIATITIIAIVAPPNNWDSMTYHMARVVHWIQNRSLAHYPTYYSAQLVHPPFAEVV ILHLQILSGGDRFANLVQVFSMIGSIIGVSLIAQQLGADKRGQIFATVFCATLPMGILQSSSTQNDYAVCFWLVCLAHFV LLTLPDKNPPTHLVLSIGASCGLAVYTKSSGYIFAFPFMVWLFIWYVNSMRWKMWKSGVIVAAIFFTLNIGHYLRNFDLY GNPISAAEYSKEYKIEIYSLPTWISNIIRNLSLHTDIVRHLGLQKIIEPLTGKLTKIITIIHGFLGVDMTDSRITHPPNS YNGVPGLSFDENVAGNPLHLLLTLIAIAIFIFHKRLRSNKELLAYVLSLVAGFLLLCWMLKLQPYQSRHHLSLFVLFSAF VGLVFCQVWSRYFVTFLAVILLVTSMQFVFINKFRPIAAENNIFNTSRNELYFTNRPHLINSYFEATNFVKTIQCENIGL SLGTEQTPSARYWEYPFWVLLNNQQQRVIKFGHILNPTNFTAVKSQVYPHNQFQPCGIIAVRRDEEAPVESMIFKNVKYT KKLFSKPVTVLMKE
Sequences:
>Translated_654_residues MLTGLVLLSLVILWLIFHNSERDWRSAVLSAAVSWGVLVTISTEVFSLLRIITFGWVLALWLLANLALGWIYYRLVKTGK RTLFSPKLPSITPVSLVLLGGVAFIIATITIIAIVAPPNNWDSMTYHMARVVHWIQNRSLAHYPTYYSAQLVHPPFAEVV ILHLQILSGGDRFANLVQVFSMIGSIIGVSLIAQQLGADKRGQIFATVFCATLPMGILQSSSTQNDYAVCFWLVCLAHFV LLTLPDKNPPTHLVLSIGASCGLAVYTKSSGYIFAFPFMVWLFIWYVNSMRWKMWKSGVIVAAIFFTLNIGHYLRNFDLY GNPISAAEYSKEYKIEIYSLPTWISNIIRNLSLHTDIVRHLGLQKIIEPLTGKLTKIITIIHGFLGVDMTDSRITHPPNS YNGVPGLSFDENVAGNPLHLLLTLIAIAIFIFHKRLRSNKELLAYVLSLVAGFLLLCWMLKLQPYQSRHHLSLFVLFSAF VGLVFCQVWSRYFVTFLAVILLVTSMQFVFINKFRPIAAENNIFNTSRNELYFTNRPHLINSYFEATNFVKTIQCENIGL SLGTEQTPSARYWEYPFWVLLNNQQQRVIKFGHILNPTNFTAVKSQVYPHNQFQPCGIIAVRRDEEAPVESMIFKNVKYT KKLFSKPVTVLMKE >Mature_654_residues MLTGLVLLSLVILWLIFHNSERDWRSAVLSAAVSWGVLVTISTEVFSLLRIITFGWVLALWLLANLALGWIYYRLVKTGK RTLFSPKLPSITPVSLVLLGGVAFIIATITIIAIVAPPNNWDSMTYHMARVVHWIQNRSLAHYPTYYSAQLVHPPFAEVV ILHLQILSGGDRFANLVQVFSMIGSIIGVSLIAQQLGADKRGQIFATVFCATLPMGILQSSSTQNDYAVCFWLVCLAHFV LLTLPDKNPPTHLVLSIGASCGLAVYTKSSGYIFAFPFMVWLFIWYVNSMRWKMWKSGVIVAAIFFTLNIGHYLRNFDLY GNPISAAEYSKEYKIEIYSLPTWISNIIRNLSLHTDIVRHLGLQKIIEPLTGKLTKIITIIHGFLGVDMTDSRITHPPNS YNGVPGLSFDENVAGNPLHLLLTLIAIAIFIFHKRLRSNKELLAYVLSLVAGFLLLCWMLKLQPYQSRHHLSLFVLFSAF VGLVFCQVWSRYFVTFLAVILLVTSMQFVFINKFRPIAAENNIFNTSRNELYFTNRPHLINSYFEATNFVKTIQCENIGL SLGTEQTPSARYWEYPFWVLLNNQQQRVIKFGHILNPTNFTAVKSQVYPHNQFQPCGIIAVRRDEEAPVESMIFKNVKYT KKLFSKPVTVLMKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74259; Mature: 74259
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGLVLLSLVILWLIFHNSERDWRSAVLSAAVSWGVLVTISTEVFSLLRIITFGWVLAL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHH WLLANLALGWIYYRLVKTGKRTLFSPKLPSITPVSLVLLGGVAFIIATITIIAIVAPPNN HHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC WDSMTYHMARVVHWIQNRSLAHYPTYYSAQLVHPPFAEVVILHLQILSGGDRFANLVQVF CCHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH SMIGSIIGVSLIAQQLGADKRGQIFATVFCATLPMGILQSSSTQNDYAVCFWLVCLAHFV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLTLPDKNPPTHLVLSIGASCGLAVYTKSSGYIFAFPFMVWLFIWYVNSMRWKMWKSGVI HEECCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH VAAIFFTLNIGHYLRNFDLYGNPISAAEYSKEYKIEIYSLPTWISNIIRNLSLHTDIVRH HHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH LGLQKIIEPLTGKLTKIITIIHGFLGVDMTDSRITHPPNSYNGVPGLSFDENVAGNPLHL HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LLTLIAIAIFIFHKRLRSNKELLAYVLSLVAGFLLLCWMLKLQPYQSRHHLSLFVLFSAF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VGLVFCQVWSRYFVTFLAVILLVTSMQFVFINKFRPIAAENNIFNTSRNELYFTNRPHLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHH NSYFEATNFVKTIQCENIGLSLGTEQTPSARYWEYPFWVLLNNQQQRVIKFGHILNPTNF HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHCCCCCCCC TAVKSQVYPHNQFQPCGIIAVRRDEEAPVESMIFKNVKYTKKLFSKPVTVLMKE HHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEECC >Mature Secondary Structure MLTGLVLLSLVILWLIFHNSERDWRSAVLSAAVSWGVLVTISTEVFSLLRIITFGWVLAL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHH WLLANLALGWIYYRLVKTGKRTLFSPKLPSITPVSLVLLGGVAFIIATITIIAIVAPPNN HHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC WDSMTYHMARVVHWIQNRSLAHYPTYYSAQLVHPPFAEVVILHLQILSGGDRFANLVQVF CCHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH SMIGSIIGVSLIAQQLGADKRGQIFATVFCATLPMGILQSSSTQNDYAVCFWLVCLAHFV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLTLPDKNPPTHLVLSIGASCGLAVYTKSSGYIFAFPFMVWLFIWYVNSMRWKMWKSGVI HEECCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH VAAIFFTLNIGHYLRNFDLYGNPISAAEYSKEYKIEIYSLPTWISNIIRNLSLHTDIVRH HHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH LGLQKIIEPLTGKLTKIITIIHGFLGVDMTDSRITHPPNSYNGVPGLSFDENVAGNPLHL HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LLTLIAIAIFIFHKRLRSNKELLAYVLSLVAGFLLLCWMLKLQPYQSRHHLSLFVLFSAF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VGLVFCQVWSRYFVTFLAVILLVTSMQFVFINKFRPIAAENNIFNTSRNELYFTNRPHLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHH NSYFEATNFVKTIQCENIGLSLGTEQTPSARYWEYPFWVLLNNQQQRVIKFGHILNPTNF HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHCCCCCCCC TAVKSQVYPHNQFQPCGIIAVRRDEEAPVESMIFKNVKYTKKLFSKPVTVLMKE HHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA