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The map label for this gene is ydjX [C]

Identifier: 17232611

GI number: 17232611

Start: 6115368

End: 6116030

Strand: Reverse

Name: ydjX [C]

Synonym: all5119

Alternate gene names: 17232611

Gene position: 6116030-6115368 (Counterclockwise)

Preceding gene: 17232612

Following gene: 17232610

Centisome position: 95.36

GC content: 46.0

Gene sequence:

>663_bases
ATGCTGAATGCTAAAACCAGTTTCGCCTTATTGATGGCTGTGTGTCTCATAGCCACAGGAGTTACAGGATATCTACTGGG
GGGAATTAATCCAGAGTTAATTCAAGCTTGGTTAAAGGCTGCGGGAATTTGGGCCCCTGTTACTTATGTAGCTGTATACG
TGGTGGCGACTATTTTGATTTTGCCATCAACGGCATTGAATTTAACTGGTGGAGCGATTTTCGGCCCTTGGATGGGGACA
TTCTGGACAAGTGTAGGTGCAATTATTGCGGCGATCGCTGCCTTTATTTTTGCGCGGACAGTAGGACGGGAAATTGTGGC
TCAAAGACTGGCTGGACGTTGGCAAGCTATCGATGCCGAAGTTAGGCAGGGAGCCGTTTTTTATATGTTTGCTATCCGGC
TGATGCCCATCCTACCCTATGGATTAGTAAATTTTGCTGCCGGTTTGACATCAATCAGCTTTAAGGATTATCTAATTGGT
ACAGCCTTGGGAACAGTACCCGGAATCTTACCATTTGTCCTTTTGGGGAGTTCTGGTTTAAAAGCCATCCGTACTGGTGA
GGTTCTACCATTAGTTGGTGCTTTGGCATTGATTGGAATGCTAGTTGGTGGTTCCACTTGGTATCGTCGTCGTCGCTCTT
TTCCCACTCGTAAAAAACCCTAA

Upstream 100 bases:

>100_bases
TCAAAACGGTGTTAGCGATCGCCTTCCTTAGTCAAAAACAGATCGATGAACGGGACTGCGTTCATCAGATGTCAGGTTGA
ACAACTAGGAGTCTTAATTA

Downstream 100 bases:

>100_bases
CAAATTTCAACTATGCCACCTAAATATTCTTTTATCGTCCCAATTTACAACGAAGAAGAAACCATCACAGAAATGTATCG
CCGCATTTCCCAGGTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLNAKTSFALLMAVCLIATGVTGYLLGGINPELIQAWLKAAGIWAPVTYVAVYVVATILILPSTALNLTGGAIFGPWMGT
FWTSVGAIIAAIAAFIFARTVGREIVAQRLAGRWQAIDAEVRQGAVFYMFAIRLMPILPYGLVNFAAGLTSISFKDYLIG
TALGTVPGILPFVLLGSSGLKAIRTGEVLPLVGALALIGMLVGGSTWYRRRRSFPTRKKP

Sequences:

>Translated_220_residues
MLNAKTSFALLMAVCLIATGVTGYLLGGINPELIQAWLKAAGIWAPVTYVAVYVVATILILPSTALNLTGGAIFGPWMGT
FWTSVGAIIAAIAAFIFARTVGREIVAQRLAGRWQAIDAEVRQGAVFYMFAIRLMPILPYGLVNFAAGLTSISFKDYLIG
TALGTVPGILPFVLLGSSGLKAIRTGEVLPLVGALALIGMLVGGSTWYRRRRSFPTRKKP
>Mature_220_residues
MLNAKTSFALLMAVCLIATGVTGYLLGGINPELIQAWLKAAGIWAPVTYVAVYVVATILILPSTALNLTGGAIFGPWMGT
FWTSVGAIIAAIAAFIFARTVGREIVAQRLAGRWQAIDAEVRQGAVFYMFAIRLMPILPYGLVNFAAGLTSISFKDYLIG
TALGTVPGILPFVLLGSSGLKAIRTGEVLPLVGALALIGMLVGGSTWYRRRRSFPTRKKP

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=231, Percent_Identity=27.7056277056277, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788049, Length=179, Percent_Identity=26.2569832402235, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23390; Mature: 23390

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNAKTSFALLMAVCLIATGVTGYLLGGINPELIQAWLKAAGIWAPVTYVAVYVVATILI
CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LPSTALNLTGGAIFGPWMGTFWTSVGAIIAAIAAFIFARTVGREIVAQRLAGRWQAIDAE
HCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQGAVFYMFAIRLMPILPYGLVNFAAGLTSISFKDYLIGTALGTVPGILPFVLLGSSGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAIRTGEVLPLVGALALIGMLVGGSTWYRRRRSFPTRKKP
CHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNAKTSFALLMAVCLIATGVTGYLLGGINPELIQAWLKAAGIWAPVTYVAVYVVATILI
CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LPSTALNLTGGAIFGPWMGTFWTSVGAIIAAIAAFIFARTVGREIVAQRLAGRWQAIDAE
HCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQGAVFYMFAIRLMPILPYGLVNFAAGLTSISFKDYLIGTALGTVPGILPFVLLGSSGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAIRTGEVLPLVGALALIGMLVGGSTWYRRRRSFPTRKKP
CHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]