| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232605
Identifier: 17232605
GI number: 17232605
Start: 6103071
End: 6105521
Strand: Reverse
Name: 17232605
Synonym: all5113
Alternate gene names: NA
Gene position: 6105521-6103071 (Counterclockwise)
Preceding gene: 17232606
Following gene: 17232604
Centisome position: 95.19
GC content: 40.96
Gene sequence:
>2451_bases ATGAAATTAACTTTTGTCGGGTTTGGTGTGCTGAGTGTAATCTGGTTATCTGTTGTTTACAACAATAGTGTTCACGCACA AGTAAGTCCCGATAATACCCTCAATACTTCTGTTACGTCCACTACTTCCATAAATGGAAGCAATAGTTACATTATTAACA ATGGCACTCGTATTGGGAATAATTTATTTCATAGTTTCAGCCAATTTTCCTTGCCTAGTGGTGGTTCTGCTTCATTTGAC AATGCCACTGATATCCAAAATATTTTTAGTCGGGTGACTAGTGGTAATATTTCTAACATTGATGGTGATATTAGTGCCAA GGGTAGTGCCAACTTATTCTTACTCAACCCCGCAGGAATTATTTTTGGGCAAAATGCCAGCTTAAATATTGGTGGTTCAT TTATAGCCACAACTGCCAATAGTATCAAGTTTGCCGATGGGACGGAATTTAGTACTGTGCAAGGTGCTGATAAACCTCTG CTGACAATGAACGCACCAGTGGGGTTGCAAATGGGTAGTAATTCTGCTGCTATCAAGGCTCAAGGAAGAGGATATACAAA TAGCGGTTTTTTTATCGTTCCAACACCCAACTCGACAGAACTACAAGTGAAACCAGGAAAAACCTTAGCATTGGTAGGCG GTAATTTACAAATAGATGGGTTTATATTGACTGCCCCAGAAGGACGGGTAGAATTGGTTAGTACCAATGGAACTGGGCAA GTTGATTTAATCCCAAATGCACAAGGTTATATGTTGGGTTATGAGAATGGACAAATTTTCGGTTATATTCAATTAGCAGA AAAGTCACTGATAAATGTAAGTGGTGTAAATTCAGGTTCTGTTCGTTTACAAGCCGGAAATATCCGTTTAACAGATGGTT CATTGATACTTGCACAAAATTATGGCTATCTTCCTGGTGGAGAAATTAACCTTCAAGCATCAACAGGAATTGATTTAATT GGCACAAGTAGCGATGGAGAAGTGTTGAGTGGAGTTCGTAGCGAAACTTATGGAATTGGAGCAGGGGGAAATATTGGTAT TTTTACGCGAAAATTTACCCTCCAAGAAGGATCTGGTTTAAATAATCTAACTTCGGGAATTGCTCCTGGTGGTAATATTG AAATTGATGCAAAAACAGTTGAAATATCTGGTTTTTCGCAAATAAACCCCAACAGAGTTACTGGTATTAGCACTTTGAGT TTTGCTTCTGGCAGTGCTGGTGATATATTCGTTAATGGTGATAATTTACTAATATCCGGTGGAGCTTCCCTTTCTTCAGT CACATTTGGCAGTGGAAGTAGTGGTAAAATTTCAATTCGCAATCAAAACACCACAGTGGTCGGAAACAGCCCTTCCGGAT TTGACAGTGCGATTACTTTAGCTACATTCGCGTTCGGAGATAACAAAGATTTGATATTGAATACTGGCAAATTACAAATT TTAGATGGGGGAAGAATTGGTTCATCTACACTGTTTGCTGGTAACGGGGGAAATGTCAGTATCAATGCAAGTGAAGCGAT CGCAATTAGTGGTCGTAATAATAATAACAACAGTGCAATTAATTCTTCTGCAATGCGTCTTAATGCACAGTTGCGTCAAT CATCTGACTTTCCAGATATGCTGACGGCAGATGCTGGTAGTCTTAGCATTACAACACCAAATCTGAGCCTGATGGATGGT GCTACTGTGACTGTAACGAGTGAAGGTACTGGTAATGCCGGCAACCTGAATATTACCGCAGATATTATCCAATTAAAAAA TCAGGCTTTGATTCAAGCACAGACTGAATCTGGGAATGGTGGAGATATAGACTTAAAAGTGGGAAGTTTGCTGTTAATGC GCGATCGCAGTAAAATGACAACCACAGCAGGCAGTACGGGTAATGGCGGCAATATCAACATTAGTTCACCCACCATTGTC GGCTTAGAAAACAGTGATATCACAGCTAATGCTGTTCGAGGTCAAGGTGGCAATATTAACATCACCACTCAAGGAATTAT TGGTTTAGAATACGGTTCTCAACTGACACCAGGAAATGATATTACAGCCAGTTCAGAGTTTGGAGTAAATGGTACAGTAC AAGTCAATACCATCGGTGTAGACCCGAATTCGGGTTTAGTTGCATTACCAACAAATTTCACCGATTCATCGCAAAAGATT GCTAGTGGATGTGCAGAGAACAGTGATAGTAGTTTTGTCACTACAGGTAGAGGTGGAACACCGCAAAATCCCAATCAGGA GGTAAGGAGCGATCGCACTTGGTCTGATGTGCGCGACATCTCTGCATACCGGAATACTGGCGCAGTGACAGCACAAATCC CCGAATCTCTGGTTCTTGTCCAAGCCACTGGTTGGCGACGTAATGCTCATGGCAAAATCGAGATACTTGCATATAAATCT CTTACTCAGGTGCAACCACCATTAACCTGTGCGGCGGCGGCTCAAAGTTAA
Upstream 100 bases:
>100_bases ACAGTTGACCTGTACTGCTATAGTCGAAAATTAATTAATGTTCCAAAACTTACCAAAATGGGAACAATAGATTGCAGACG AAGAAACAAAAACTGGATTC
Downstream 100 bases:
>100_bases TTGGAGTGTTGAGTCAAACAAATATTGTGGGAAACCTAAGTATAAAGTTGTATTGTGGGAAACCTAAGCATAAAGTTGAA ATGGAGAAGGGGTGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MKLTFVGFGVLSVIWLSVVYNNSVHAQVSPDNTLNTSVTSTTSINGSNSYIINNGTRIGNNLFHSFSQFSLPSGGSASFD NATDIQNIFSRVTSGNISNIDGDISAKGSANLFLLNPAGIIFGQNASLNIGGSFIATTANSIKFADGTEFSTVQGADKPL LTMNAPVGLQMGSNSAAIKAQGRGYTNSGFFIVPTPNSTELQVKPGKTLALVGGNLQIDGFILTAPEGRVELVSTNGTGQ VDLIPNAQGYMLGYENGQIFGYIQLAEKSLINVSGVNSGSVRLQAGNIRLTDGSLILAQNYGYLPGGEINLQASTGIDLI GTSSDGEVLSGVRSETYGIGAGGNIGIFTRKFTLQEGSGLNNLTSGIAPGGNIEIDAKTVEISGFSQINPNRVTGISTLS FASGSAGDIFVNGDNLLISGGASLSSVTFGSGSSGKISIRNQNTTVVGNSPSGFDSAITLATFAFGDNKDLILNTGKLQI LDGGRIGSSTLFAGNGGNVSINASEAIAISGRNNNNNSAINSSAMRLNAQLRQSSDFPDMLTADAGSLSITTPNLSLMDG ATVTVTSEGTGNAGNLNITADIIQLKNQALIQAQTESGNGGDIDLKVGSLLLMRDRSKMTTTAGSTGNGGNINISSPTIV GLENSDITANAVRGQGGNINITTQGIIGLEYGSQLTPGNDITASSEFGVNGTVQVNTIGVDPNSGLVALPTNFTDSSQKI ASGCAENSDSSFVTTGRGGTPQNPNQEVRSDRTWSDVRDISAYRNTGAVTAQIPESLVLVQATGWRRNAHGKIEILAYKS LTQVQPPLTCAAAAQS
Sequences:
>Translated_816_residues MKLTFVGFGVLSVIWLSVVYNNSVHAQVSPDNTLNTSVTSTTSINGSNSYIINNGTRIGNNLFHSFSQFSLPSGGSASFD NATDIQNIFSRVTSGNISNIDGDISAKGSANLFLLNPAGIIFGQNASLNIGGSFIATTANSIKFADGTEFSTVQGADKPL LTMNAPVGLQMGSNSAAIKAQGRGYTNSGFFIVPTPNSTELQVKPGKTLALVGGNLQIDGFILTAPEGRVELVSTNGTGQ VDLIPNAQGYMLGYENGQIFGYIQLAEKSLINVSGVNSGSVRLQAGNIRLTDGSLILAQNYGYLPGGEINLQASTGIDLI GTSSDGEVLSGVRSETYGIGAGGNIGIFTRKFTLQEGSGLNNLTSGIAPGGNIEIDAKTVEISGFSQINPNRVTGISTLS FASGSAGDIFVNGDNLLISGGASLSSVTFGSGSSGKISIRNQNTTVVGNSPSGFDSAITLATFAFGDNKDLILNTGKLQI LDGGRIGSSTLFAGNGGNVSINASEAIAISGRNNNNNSAINSSAMRLNAQLRQSSDFPDMLTADAGSLSITTPNLSLMDG ATVTVTSEGTGNAGNLNITADIIQLKNQALIQAQTESGNGGDIDLKVGSLLLMRDRSKMTTTAGSTGNGGNINISSPTIV GLENSDITANAVRGQGGNINITTQGIIGLEYGSQLTPGNDITASSEFGVNGTVQVNTIGVDPNSGLVALPTNFTDSSQKI ASGCAENSDSSFVTTGRGGTPQNPNQEVRSDRTWSDVRDISAYRNTGAVTAQIPESLVLVQATGWRRNAHGKIEILAYKS LTQVQPPLTCAAAAQS >Mature_816_residues MKLTFVGFGVLSVIWLSVVYNNSVHAQVSPDNTLNTSVTSTTSINGSNSYIINNGTRIGNNLFHSFSQFSLPSGGSASFD NATDIQNIFSRVTSGNISNIDGDISAKGSANLFLLNPAGIIFGQNASLNIGGSFIATTANSIKFADGTEFSTVQGADKPL LTMNAPVGLQMGSNSAAIKAQGRGYTNSGFFIVPTPNSTELQVKPGKTLALVGGNLQIDGFILTAPEGRVELVSTNGTGQ VDLIPNAQGYMLGYENGQIFGYIQLAEKSLINVSGVNSGSVRLQAGNIRLTDGSLILAQNYGYLPGGEINLQASTGIDLI GTSSDGEVLSGVRSETYGIGAGGNIGIFTRKFTLQEGSGLNNLTSGIAPGGNIEIDAKTVEISGFSQINPNRVTGISTLS FASGSAGDIFVNGDNLLISGGASLSSVTFGSGSSGKISIRNQNTTVVGNSPSGFDSAITLATFAFGDNKDLILNTGKLQI LDGGRIGSSTLFAGNGGNVSINASEAIAISGRNNNNNSAINSSAMRLNAQLRQSSDFPDMLTADAGSLSITTPNLSLMDG ATVTVTSEGTGNAGNLNITADIIQLKNQALIQAQTESGNGGDIDLKVGSLLLMRDRSKMTTTAGSTGNGGNINISSPTIV GLENSDITANAVRGQGGNINITTQGIIGLEYGSQLTPGNDITASSEFGVNGTVQVNTIGVDPNSGLVALPTNFTDSSQKI ASGCAENSDSSFVTTGRGGTPQNPNQEVRSDRTWSDVRDISAYRNTGAVTAQIPESLVLVQATGWRRNAHGKIEILAYKS LTQVQPPLTCAAAAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83866; Mature: 83866
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTFVGFGVLSVIWLSVVYNNSVHAQVSPDNTLNTSVTSTTSINGSNSYIINNGTRIGN CEEEEEEHHHHHHHHHHHEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCH NLFHSFSQFSLPSGGSASFDNATDIQNIFSRVTSGNISNIDGDISAKGSANLFLLNPAGI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCEE IFGQNASLNIGGSFIATTANSIKFADGTEFSTVQGADKPLLTMNAPVGLQMGSNSAAIKA EEECCCCEEECCEEEEECCCCEEECCCCCEEEECCCCCCEEEECCCEEEEECCCCEEEEE QGRGYTNSGFFIVPTPNSTELQVKPGKTLALVGGNLQIDGFILTAPEGRVELVSTNGTGQ CCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCEEEEEEEEECCCCCEEEEEECCCCE VDLIPNAQGYMLGYENGQIFGYIQLAEKSLINVSGVNSGSVRLQAGNIRLTDGSLILAQN EEEEECCCEEEEEECCCCEEEEEEEECCCEEEEECCCCCEEEEEECCEEEECCCEEEEEC YGYLPGGEINLQASTGIDLIGTSSDGEVLSGVRSETYGIGAGGNIGIFTRKFTLQEGSGL CCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCHHHEEECCCCCEEEEEEEEEECCCCCC NNLTSGIAPGGNIEIDAKTVEISGFSQINPNRVTGISTLSFASGSAGDIFVNGDNLLISG CHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEECCCEEEEEC GASLSSVTFGSGSSGKISIRNQNTTVVGNSPSGFDSAITLATFAFGDNKDLILNTGKLQI CCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCEEEE LDGGRIGSSTLFAGNGGNVSINASEAIAISGRNNNNNSAINSSAMRLNAQLRQSSDFPDM EECCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCH LTADAGSLSITTPNLSLMDGATVTVTSEGTGNAGNLNITADIIQLKNQALIQAQTESGNG HCCCCCEEEEECCCCEEECCCEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC GDIDLKVGSLLLMRDRSKMTTTAGSTGNGGNINISSPTIVGLENSDITANAVRGQGGNIN CEEEEEECEEEEEECCCCEEEECCCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCEEE ITTQGIIGLEYGSQLTPGNDITASSEFGVNGTVQVNTIGVDPNSGLVALPTNFTDSSQKI EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCHHHH ASGCAENSDSSFVTTGRGGTPQNPNQEVRSDRTWSDVRDISAYRNTGAVTAQIPESLVLV HHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEE QATGWRRNAHGKIEILAYKSLTQVQPPLTCAAAAQS EECCCCCCCCCEEEEEEECCHHHCCCCEEEECCCCC >Mature Secondary Structure MKLTFVGFGVLSVIWLSVVYNNSVHAQVSPDNTLNTSVTSTTSINGSNSYIINNGTRIGN CEEEEEEHHHHHHHHHHHEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCH NLFHSFSQFSLPSGGSASFDNATDIQNIFSRVTSGNISNIDGDISAKGSANLFLLNPAGI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCEE IFGQNASLNIGGSFIATTANSIKFADGTEFSTVQGADKPLLTMNAPVGLQMGSNSAAIKA EEECCCCEEECCEEEEECCCCEEECCCCCEEEECCCCCCEEEECCCEEEEECCCCEEEEE QGRGYTNSGFFIVPTPNSTELQVKPGKTLALVGGNLQIDGFILTAPEGRVELVSTNGTGQ CCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCEEEEEEEEECCCCCEEEEEECCCCE VDLIPNAQGYMLGYENGQIFGYIQLAEKSLINVSGVNSGSVRLQAGNIRLTDGSLILAQN EEEEECCCEEEEEECCCCEEEEEEEECCCEEEEECCCCCEEEEEECCEEEECCCEEEEEC YGYLPGGEINLQASTGIDLIGTSSDGEVLSGVRSETYGIGAGGNIGIFTRKFTLQEGSGL CCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCHHHEEECCCCCEEEEEEEEEECCCCCC NNLTSGIAPGGNIEIDAKTVEISGFSQINPNRVTGISTLSFASGSAGDIFVNGDNLLISG CHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEECCCEEEEEC GASLSSVTFGSGSSGKISIRNQNTTVVGNSPSGFDSAITLATFAFGDNKDLILNTGKLQI CCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCEEEE LDGGRIGSSTLFAGNGGNVSINASEAIAISGRNNNNNSAINSSAMRLNAQLRQSSDFPDM EECCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCH LTADAGSLSITTPNLSLMDGATVTVTSEGTGNAGNLNITADIIQLKNQALIQAQTESGNG HCCCCCEEEEECCCCEEECCCEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC GDIDLKVGSLLLMRDRSKMTTTAGSTGNGGNINISSPTIVGLENSDITANAVRGQGGNIN CEEEEEECEEEEEECCCCEEEECCCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCEEE ITTQGIIGLEYGSQLTPGNDITASSEFGVNGTVQVNTIGVDPNSGLVALPTNFTDSSQKI EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCHHHH ASGCAENSDSSFVTTGRGGTPQNPNQEVRSDRTWSDVRDISAYRNTGAVTAQIPESLVLV HHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEE QATGWRRNAHGKIEILAYKSLTQVQPPLTCAAAAQS EECCCCCCCCCEEEEEEECCHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA