| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17232604
Identifier: 17232604
GI number: 17232604
Start: 6100478
End: 6102979
Strand: Reverse
Name: 17232604
Synonym: all5112
Alternate gene names: NA
Gene position: 6102979-6100478 (Counterclockwise)
Preceding gene: 17232605
Following gene: 17232603
Centisome position: 95.15
GC content: 43.73
Gene sequence:
>2502_bases GTGATGAAAGTAACTTCTGTATGCTTGGGTTTAGCCTGTGTGTTCTTAGCTGCGGGAAGGTCTTTACCAGCAACGGCTCA GGTGACTTCTGATGGTACTACAAACACTACTGTCAACCCAAGCAGTAATAATTTTCAGATTATTAACGGTACTGCCAGAG GCAATAATTTATTTCACAGCTTTAGTAATTTCTCTCTACCAAAAGACACTTCAGCAACTTTTGACTTAACAAATACACCA AATATTACAAATATATTTAGCCGAGTTACGGGTGGTAATATTTCTCATATTGATGGACTAATTGAGACTATTAAGAGTAA TAATCCGGTAAGTTTGTTTTTAATGAATCCGGCAGGGATTGTGTTTGGTTCCAATGCCTCCTTGAATATTGGCGGGTCGT TTGTAGGAACAACGGCAAATAGTCTTAAGTTCGCTGACGGGACAGAGTTTAGTGCAAATAATCCCAGTTCAATACCATTG CTGACAATGAGTGTTCCAATTGGCTTGCAAATGGGCAGTAATCCCAACCCCATAATAGTTGAAGGCACAGGTCATGCCCT AACCGCGCCCAGTACCGTCGCCCCCATCACTCAAAATCCCAGTGCCTCAGAACTGAGGGTAAAGCCAGGAAAAACCTTGG CACTGGTAGGGGGTAACTTGAATCTCATTGGTGCAACCTTGAATGCACCCGAAGGACGTTTGGAATTGGGAAGTTTAAGC GGAGTGGGAATGGTTAGTTTAAACCCCATCGCTCAGGGTTATCAGTTAAGTTATCAGAGCGGACAAAGCTTTGCAGATAT CCAACTTACCCAAAAATCCTTGCTGACTGTAGGAGCATTATTAAGTGCAGGGGCATTGAATGCTGGTTCAGCACAATTAC AGGGACGGCACATTCAAATCAGTGATGGATCAATTATATTTTCCAAAAATCTGGGAAATGTTGCTGGGGGTGAAACTTTT TTACAGGCTTCAGAAGGGATTGAGATTTTTGGTACAACTGCCAACGCCCAAATTCGTAGTGGTATCCGCTCTGAAGGGTT AAATACTGGCACAGGTTCATCCATTTATATCATCACTCCCCACTTAACCATCTCACAAGGTGCAGGAGTCAACACCAATG CTTTTGGATCGTCTGCCAGTGGCGATATTCAGATTGATGCCGAGAGAGTGGAGTTATCTGGTTTCTCTCCCATCAATCCT ACAGGAGTAACCTCCCTGACTACCTCTTCCCGAACAGCTAAATCAGCAGGCAATCTCTCCATTAACAGTAATAGTCTACT GGTTTCTCAGGGAGCAGCCATCTCTTCACTGGCATTGGCGAGTGGTTCCACGGGACAAGTAACTATTCGCAGTAAAAATA CGACTGTCACAGGAGACAATCCGGCAGGACTCTATAGCAACATTAGTGCAATCACTTATGGCACAGGCGAAGCCCAAACC TTAACGTTAGATACGGATCGATTACAACTGCTCAATGGGGGAGCAGTTGCTACCACATCCTTCTTGATTGGTGAAGCTGG AAATTTAAACATTAACGCGAAGGAATCAATTTTGATTGACGGACGCAGTCAAACTAACAATAGCAGTATTAACTCAGCAG TCCTTTCCTCTACGGCATTAATCAAACAATTATTCAATTTGCCAAATATTCTGTCGGCGAATGCCGGAACTGTGAATGTA ACCACCCCTACCTTGACGTTAACCAATGGCGGCGCAGTTAGTGTGACTAATGAAGGGACAGGCGATGGGGGTCATATAAA CATTACTGCCAATAGGATATTTTTAGATCGTCAAGGTAGCATTCAAGCTCAAACGTTATCGGGTGAGGGAGGTAATATTA CCTCACAAGTCAGTGATCTGTTGTTACTACGTCACAATAGCTTGATTAGTGCGACATCCGGGGGTACTGGTAATGGCGGC AATATTAGCATTAATGCTCCTGTGATCGCTGGGCTAGAAAACAGTGACATTATTGCTAATGCAGTGAAAGGAAGAGGCGG CAATATTGATATCAGCACTCAAGGTATTATTGGTCTAGCATTCCACAATACTCTTACCCCAAGAGTTGACCAGACCAACG ACATCACAGCCAGTTCCGAATTTAATATTAATGGCACGGTAAAAATTAATAACATTGGTGTTGATCCCAATTCTGGTTTA GTTGAATTACCAGAAAATATAACCGACCCATCGCAGCAAATTGCGACAGGTTGTTCTAACACCTTTGGTAGTAGTTTTGT CGCCACTGGAAGAGGGGGAATACCGCAAAATCCCACACAGGACGTGAGGAGCGATCGCACTTGGTCTGATACTCGTGATA TCTCTGCATTCCAGAACAGACCACAAATACAAGCACAAATACAGAAATCCCCAGAAACACTCGTCCAAGCCACAGGTTGG CGACGTAACGCTAATGGCAAAATTGAGTTAAGAGTCGCTCAATCACCTGCTCATGTGCCATCGCCATCATACTTAACTTG TGCTGCCGTTTCCCAAAATTAA
Upstream 100 bases:
>100_bases CAAAGTTAATTGGAGTGTTGAGTCAAACAAATATTGTGGGAAACCTAAGTATAAAGTTGTATTGTGGGAAACCTAAGCAT AAAGTTGAAATGGAGAAGGG
Downstream 100 bases:
>100_bases CTGTCCTGAATCTCCACAAGTGAGGGTTAGAAGTATCTATCTGAAGGGAATCATAAGCATAAATCATTAAGTATCACAGA CATAAGTGATGAAAGTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MMKVTSVCLGLACVFLAAGRSLPATAQVTSDGTTNTTVNPSSNNFQIINGTARGNNLFHSFSNFSLPKDTSATFDLTNTP NITNIFSRVTGGNISHIDGLIETIKSNNPVSLFLMNPAGIVFGSNASLNIGGSFVGTTANSLKFADGTEFSANNPSSIPL LTMSVPIGLQMGSNPNPIIVEGTGHALTAPSTVAPITQNPSASELRVKPGKTLALVGGNLNLIGATLNAPEGRLELGSLS GVGMVSLNPIAQGYQLSYQSGQSFADIQLTQKSLLTVGALLSAGALNAGSAQLQGRHIQISDGSIIFSKNLGNVAGGETF LQASEGIEIFGTTANAQIRSGIRSEGLNTGTGSSIYIITPHLTISQGAGVNTNAFGSSASGDIQIDAERVELSGFSPINP TGVTSLTTSSRTAKSAGNLSINSNSLLVSQGAAISSLALASGSTGQVTIRSKNTTVTGDNPAGLYSNISAITYGTGEAQT LTLDTDRLQLLNGGAVATTSFLIGEAGNLNINAKESILIDGRSQTNNSSINSAVLSSTALIKQLFNLPNILSANAGTVNV TTPTLTLTNGGAVSVTNEGTGDGGHINITANRIFLDRQGSIQAQTLSGEGGNITSQVSDLLLLRHNSLISATSGGTGNGG NISINAPVIAGLENSDIIANAVKGRGGNIDISTQGIIGLAFHNTLTPRVDQTNDITASSEFNINGTVKINNIGVDPNSGL VELPENITDPSQQIATGCSNTFGSSFVATGRGGIPQNPTQDVRSDRTWSDTRDISAFQNRPQIQAQIQKSPETLVQATGW RRNANGKIELRVAQSPAHVPSPSYLTCAAVSQN
Sequences:
>Translated_833_residues MMKVTSVCLGLACVFLAAGRSLPATAQVTSDGTTNTTVNPSSNNFQIINGTARGNNLFHSFSNFSLPKDTSATFDLTNTP NITNIFSRVTGGNISHIDGLIETIKSNNPVSLFLMNPAGIVFGSNASLNIGGSFVGTTANSLKFADGTEFSANNPSSIPL LTMSVPIGLQMGSNPNPIIVEGTGHALTAPSTVAPITQNPSASELRVKPGKTLALVGGNLNLIGATLNAPEGRLELGSLS GVGMVSLNPIAQGYQLSYQSGQSFADIQLTQKSLLTVGALLSAGALNAGSAQLQGRHIQISDGSIIFSKNLGNVAGGETF LQASEGIEIFGTTANAQIRSGIRSEGLNTGTGSSIYIITPHLTISQGAGVNTNAFGSSASGDIQIDAERVELSGFSPINP TGVTSLTTSSRTAKSAGNLSINSNSLLVSQGAAISSLALASGSTGQVTIRSKNTTVTGDNPAGLYSNISAITYGTGEAQT LTLDTDRLQLLNGGAVATTSFLIGEAGNLNINAKESILIDGRSQTNNSSINSAVLSSTALIKQLFNLPNILSANAGTVNV TTPTLTLTNGGAVSVTNEGTGDGGHINITANRIFLDRQGSIQAQTLSGEGGNITSQVSDLLLLRHNSLISATSGGTGNGG NISINAPVIAGLENSDIIANAVKGRGGNIDISTQGIIGLAFHNTLTPRVDQTNDITASSEFNINGTVKINNIGVDPNSGL VELPENITDPSQQIATGCSNTFGSSFVATGRGGIPQNPTQDVRSDRTWSDTRDISAFQNRPQIQAQIQKSPETLVQATGW RRNANGKIELRVAQSPAHVPSPSYLTCAAVSQN >Mature_833_residues MMKVTSVCLGLACVFLAAGRSLPATAQVTSDGTTNTTVNPSSNNFQIINGTARGNNLFHSFSNFSLPKDTSATFDLTNTP NITNIFSRVTGGNISHIDGLIETIKSNNPVSLFLMNPAGIVFGSNASLNIGGSFVGTTANSLKFADGTEFSANNPSSIPL LTMSVPIGLQMGSNPNPIIVEGTGHALTAPSTVAPITQNPSASELRVKPGKTLALVGGNLNLIGATLNAPEGRLELGSLS GVGMVSLNPIAQGYQLSYQSGQSFADIQLTQKSLLTVGALLSAGALNAGSAQLQGRHIQISDGSIIFSKNLGNVAGGETF LQASEGIEIFGTTANAQIRSGIRSEGLNTGTGSSIYIITPHLTISQGAGVNTNAFGSSASGDIQIDAERVELSGFSPINP TGVTSLTTSSRTAKSAGNLSINSNSLLVSQGAAISSLALASGSTGQVTIRSKNTTVTGDNPAGLYSNISAITYGTGEAQT LTLDTDRLQLLNGGAVATTSFLIGEAGNLNINAKESILIDGRSQTNNSSINSAVLSSTALIKQLFNLPNILSANAGTVNV TTPTLTLTNGGAVSVTNEGTGDGGHINITANRIFLDRQGSIQAQTLSGEGGNITSQVSDLLLLRHNSLISATSGGTGNGG NISINAPVIAGLENSDIIANAVKGRGGNIDISTQGIIGLAFHNTLTPRVDQTNDITASSEFNINGTVKINNIGVDPNSGL VELPENITDPSQQIATGCSNTFGSSFVATGRGGIPQNPTQDVRSDRTWSDTRDISAFQNRPQIQAQIQKSPETLVQATGW RRNANGKIELRVAQSPAHVPSPSYLTCAAVSQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85432; Mature: 85432
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVTSVCLGLACVFLAAGRSLPATAQVTSDGTTNTTVNPSSNNFQIINGTARGNNLFHS CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCEEEH FSNFSLPKDTSATFDLTNTPNITNIFSRVTGGNISHIDGLIETIKSNNPVSLFLMNPAGI HCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCE VFGSNASLNIGGSFVGTTANSLKFADGTEFSANNPSSIPLLTMSVPIGLQMGSNPNPIIV EEECCCEEEECCEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEE EGTGHALTAPSTVAPITQNPSASELRVKPGKTLALVGGNLNLIGATLNAPEGRLELGSLS ECCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEEEEECCCCCCEEEECCC GVGMVSLNPIAQGYQLSYQSGQSFADIQLTQKSLLTVGALLSAGALNAGSAQLQGRHIQI CCEEEEECCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEECCCEEEE SDGSIIFSKNLGNVAGGETFLQASEGIEIFGTTANAQIRSGIRSEGLNTGTGSSIYIITP ECCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCHHHCCCCCCCCCEEEEEEC HLTISQGAGVNTNAFGSSASGDIQIDAERVELSGFSPINPTGVTSLTTSSRTAKSAGNLS CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE INSNSLLVSQGAAISSLALASGSTGQVTIRSKNTTVTGDNPAGLYSNISAITYGTGEAQT ECCCEEEEECCCCEEEEEEECCCCCEEEEEECCCEEECCCCCCHHCCCEEEEECCCCCEE LTLDTDRLQLLNGGAVATTSFLIGEAGNLNINAKESILIDGRSQTNNSSINSAVLSSTAL EEEECCCEEEECCCCEEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHH IKQLFNLPNILSANAGTVNVTTPTLTLTNGGAVSVTNEGTGDGGHINITANRIFLDRQGS HHHHHCCCCEEECCCCEEEEECCEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEECCCC IQAQTLSGEGGNITSQVSDLLLLRHNSLISATSGGTGNGGNISINAPVIAGLENSDIIAN EEEEEECCCCCCHHHHHHHEEEEECCCEEEECCCCCCCCCEEEECCCEEECCCCCCEEEE AVKGRGGNIDISTQGIIGLAFHNTLTPRVDQTNDITASSEFNINGTVKINNIGVDPNSGL ECCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCEECCEEEEEEEEECCCCCCCE VELPENITDPSQQIATGCSNTFGSSFVATGRGGIPQNPTQDVRSDRTWSDTRDISAFQNR EECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHCC PQIQAQIQKSPETLVQATGWRRNANGKIELRVAQSPAHVPSPSYLTCAAVSQN CCEEHEECCCHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MMKVTSVCLGLACVFLAAGRSLPATAQVTSDGTTNTTVNPSSNNFQIINGTARGNNLFHS CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCEEEH FSNFSLPKDTSATFDLTNTPNITNIFSRVTGGNISHIDGLIETIKSNNPVSLFLMNPAGI HCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCE VFGSNASLNIGGSFVGTTANSLKFADGTEFSANNPSSIPLLTMSVPIGLQMGSNPNPIIV EEECCCEEEECCEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEE EGTGHALTAPSTVAPITQNPSASELRVKPGKTLALVGGNLNLIGATLNAPEGRLELGSLS ECCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEEEEECCCCCCEEEECCC GVGMVSLNPIAQGYQLSYQSGQSFADIQLTQKSLLTVGALLSAGALNAGSAQLQGRHIQI CCEEEEECCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEECCCEEEE SDGSIIFSKNLGNVAGGETFLQASEGIEIFGTTANAQIRSGIRSEGLNTGTGSSIYIITP ECCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCHHHHCCHHHCCCCCCCCCEEEEEEC HLTISQGAGVNTNAFGSSASGDIQIDAERVELSGFSPINPTGVTSLTTSSRTAKSAGNLS CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE INSNSLLVSQGAAISSLALASGSTGQVTIRSKNTTVTGDNPAGLYSNISAITYGTGEAQT ECCCEEEEECCCCEEEEEEECCCCCEEEEEECCCEEECCCCCCHHCCCEEEEECCCCCEE LTLDTDRLQLLNGGAVATTSFLIGEAGNLNINAKESILIDGRSQTNNSSINSAVLSSTAL EEEECCCEEEECCCCEEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHH IKQLFNLPNILSANAGTVNVTTPTLTLTNGGAVSVTNEGTGDGGHINITANRIFLDRQGS HHHHHCCCCEEECCCCEEEEECCEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEECCCC IQAQTLSGEGGNITSQVSDLLLLRHNSLISATSGGTGNGGNISINAPVIAGLENSDIIAN EEEEEECCCCCCHHHHHHHEEEEECCCEEEECCCCCCCCCEEEECCCEEECCCCCCEEEE AVKGRGGNIDISTQGIIGLAFHNTLTPRVDQTNDITASSEFNINGTVKINNIGVDPNSGL ECCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCEECCEEEEEEEEECCCCCCCE VELPENITDPSQQIATGCSNTFGSSFVATGRGGIPQNPTQDVRSDRTWSDTRDISAFQNR EECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHCC PQIQAQIQKSPETLVQATGWRRNANGKIELRVAQSPAHVPSPSYLTCAAVSQN CCEEHEECCCHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA