| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232600
Identifier: 17232600
GI number: 17232600
Start: 6092491
End: 6094692
Strand: Reverse
Name: 17232600
Synonym: all5108
Alternate gene names: NA
Gene position: 6094692-6092491 (Counterclockwise)
Preceding gene: 17232602
Following gene: 17232599
Centisome position: 95.03
GC content: 41.24
Gene sequence:
>2202_bases GTGACGGGCAGTAGTATTTCTCATATTGATGGTTTAATTCAAGCTAATGGTAGTGCCAATTTATTTTTACTCAATCCCAA TGGAATTATTTTTGGCTCTAATGCCAGGTTAAATATTGGTGGGTCTTTTCTAGGAACGACAGCCGATAGTATTAACTTTA GCGATGGCTTTATCTTTAGTACAACTGATACAACCACACCTTCTTTGCTCACGATGAGCGTACCCATTGGCTTACAGATG GGACAAAATTCAGGTAGCATTCAAGTCCAAGGACAAGGACACAATCTTCTCCACCCCACCAATTTTTTAGCCCCAGTGAC TCGTGATCCACAACTTGGTGGTTTGCGCCTGTTTCCAGGGAAAACATTAGCCCTCTTGGGTAATGGTATTCAATTGGATG CAGGGGTGTTAATTGCTGAAAGCGGACATATTGAACTGGGAAGCATGACAGCAGGAACAGTTCATCTCAATACTAATACT CCTATTTGGAAATTTGACTATCATTCTGGTCAAATTTTATCAGATATCTATCTCACTCGCGCTGCTCTCATCGATACAAG TGGTAATCCTGGAGGTTCGATTCATCTTCAAGGAAAAGATATTCACATTCAAAATAGTTCTAGTGTATTTATTCAACATC AAGGACAGCAACGCCCAGGTAGCATCAAAATTAACGCAGATTTATTAGCAATGAGTGGTGCATTGCCGCAAAAAAATCCA AGTTTCATTTTGTCTGAAAATCTGGGTAGTGGATATGGGGCGAATATAGATGTTTCAGCTAGGCAGTTGATTGTGCAGGA TGGGGGCGGAATTTTATCCACAACCTATACAAATGGGGGGAAAGGCGGCGATATTACTGTCACTGCCGCAGAATCAATCC AAATTATAGGTTTTTCTCCTATTAATTTTCGTGCTAGTGGCATTAATAGCCCATCTTTCCCAGGAGGAGGAAAGGGTGGA AATATTTCGATCGCCACTAGAGATTTAATTGTGAAAGAAGGGGGAACGATTACATCACTGGTTGAAGGAGGAGGTAGTGG CGGTAATATTCACATGACCGCAGATATAATTTCTCTATTTGGTGAAAATCCAGGATCAGGTGGAGCATCCGCTATTGCTA CATCGACCTTTTTCGGGGGAGATGGCGGTGTAATAACTATTAATACCAGACAATTAATACTGAGAGCATCTGGCGTAATT TCTGCTAGCACTTCTGATACTGGTAATGCGGGTGATTTAACTATTTATGCTAGTGAATCTGTGGAAGTTGATGGTTCTAA TTCCGTGTTGCGGGATCATAGTCGTATTACTGCATCAGGGCAAAGATTTCGACCCAGGTATTTACAAAATAGAGGTTTGT CAGCATTTCCTAGTGGCAATGGCGGAAATTTAACTATTATCTCTCCCACTATTAAAGTTAGTAATGAGGGCTATATCGCG GCGGAAAATATAGGTAGTGGCAATGGTGGATATTTACAAATTCAAACCGACTCGCTCTTGTTAGAGCAACAAGGTCAAAT TAGAACTGCTGCTGCATCCGGGCAAGGCGGTTCTCTAGGACTGATTGTAGGAGATATTCTCCTGATGCGCCACAACAGTC TCATCAGTGCTAGAGCTGGAAATAATGGTAATGGGGGCAACATTACTGTTATTTCTCCCTTAATTGTCGGACTAGAAAAC AGTGATATTATTGCCAATGCCGTTGCAGGAAATGGAGGCAAAATTCAAATTACCACTCAAGGTTTATTGGGCTTAGAATT TCGTGATGGCGAAACTTCCGAAAGTGATATTACTGCCAGTTCTCAATTTGGGGTAAGTGGTACAGTTCAAATTAATAATG TCGGTGTTGATCCTAATTCCGGTTTAGTAGAATTACCGGAGAATGTGACTGATCCATCACAGCAAATAGCTACTGGTTGT TCTAATACTAATAGTAGTAGTTTTGTCGCCACTGGTAGGGGTGGTGTGCCGCAAAATCCTACACAGGAAGTGAGGAGCGA TCGCACTTGGTCTGATACTCGTGATATATCTGCATTCCAAAACACACCACAAATACAAGCACAAACACCTATACAACCAC AAATTCCTATCCAAGCAACTTCTTGGCATCGTAACACCCAAGGCAAAATAGAATTAATTGCCGATAAATCTTCCGTGAAT TTACAGTCATCATTAACTTGTACTGCTTTTCATAAAGGCTAA
Upstream 100 bases:
>100_bases TGGGAATAATCTGTTTCACAGTTTACAGCAATTCTCAATTTCCACCAATGGCTCTGCTTTCTTCGACAATGCTTTAGATA TCCAAAATATTTTTAGTCGT
Downstream 100 bases:
>100_bases AAAGAACTCACCATAACATTACAAACTTCCTCAACTTGTAGCATTTTGCTTGGGAAAACTATACACAGGCTAGAAAATTA GAGATAAGTTGATGCAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MTGSSISHIDGLIQANGSANLFLLNPNGIIFGSNARLNIGGSFLGTTADSINFSDGFIFSTTDTTTPSLLTMSVPIGLQM GQNSGSIQVQGQGHNLLHPTNFLAPVTRDPQLGGLRLFPGKTLALLGNGIQLDAGVLIAESGHIELGSMTAGTVHLNTNT PIWKFDYHSGQILSDIYLTRAALIDTSGNPGGSIHLQGKDIHIQNSSSVFIQHQGQQRPGSIKINADLLAMSGALPQKNP SFILSENLGSGYGANIDVSARQLIVQDGGGILSTTYTNGGKGGDITVTAAESIQIIGFSPINFRASGINSPSFPGGGKGG NISIATRDLIVKEGGTITSLVEGGGSGGNIHMTADIISLFGENPGSGGASAIATSTFFGGDGGVITINTRQLILRASGVI SASTSDTGNAGDLTIYASESVEVDGSNSVLRDHSRITASGQRFRPRYLQNRGLSAFPSGNGGNLTIISPTIKVSNEGYIA AENIGSGNGGYLQIQTDSLLLEQQGQIRTAAASGQGGSLGLIVGDILLMRHNSLISARAGNNGNGGNITVISPLIVGLEN SDIIANAVAGNGGKIQITTQGLLGLEFRDGETSESDITASSQFGVSGTVQINNVGVDPNSGLVELPENVTDPSQQIATGC SNTNSSSFVATGRGGVPQNPTQEVRSDRTWSDTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVN LQSSLTCTAFHKG
Sequences:
>Translated_733_residues MTGSSISHIDGLIQANGSANLFLLNPNGIIFGSNARLNIGGSFLGTTADSINFSDGFIFSTTDTTTPSLLTMSVPIGLQM GQNSGSIQVQGQGHNLLHPTNFLAPVTRDPQLGGLRLFPGKTLALLGNGIQLDAGVLIAESGHIELGSMTAGTVHLNTNT PIWKFDYHSGQILSDIYLTRAALIDTSGNPGGSIHLQGKDIHIQNSSSVFIQHQGQQRPGSIKINADLLAMSGALPQKNP SFILSENLGSGYGANIDVSARQLIVQDGGGILSTTYTNGGKGGDITVTAAESIQIIGFSPINFRASGINSPSFPGGGKGG NISIATRDLIVKEGGTITSLVEGGGSGGNIHMTADIISLFGENPGSGGASAIATSTFFGGDGGVITINTRQLILRASGVI SASTSDTGNAGDLTIYASESVEVDGSNSVLRDHSRITASGQRFRPRYLQNRGLSAFPSGNGGNLTIISPTIKVSNEGYIA AENIGSGNGGYLQIQTDSLLLEQQGQIRTAAASGQGGSLGLIVGDILLMRHNSLISARAGNNGNGGNITVISPLIVGLEN SDIIANAVAGNGGKIQITTQGLLGLEFRDGETSESDITASSQFGVSGTVQINNVGVDPNSGLVELPENVTDPSQQIATGC SNTNSSSFVATGRGGVPQNPTQEVRSDRTWSDTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVN LQSSLTCTAFHKG >Mature_732_residues TGSSISHIDGLIQANGSANLFLLNPNGIIFGSNARLNIGGSFLGTTADSINFSDGFIFSTTDTTTPSLLTMSVPIGLQMG QNSGSIQVQGQGHNLLHPTNFLAPVTRDPQLGGLRLFPGKTLALLGNGIQLDAGVLIAESGHIELGSMTAGTVHLNTNTP IWKFDYHSGQILSDIYLTRAALIDTSGNPGGSIHLQGKDIHIQNSSSVFIQHQGQQRPGSIKINADLLAMSGALPQKNPS FILSENLGSGYGANIDVSARQLIVQDGGGILSTTYTNGGKGGDITVTAAESIQIIGFSPINFRASGINSPSFPGGGKGGN ISIATRDLIVKEGGTITSLVEGGGSGGNIHMTADIISLFGENPGSGGASAIATSTFFGGDGGVITINTRQLILRASGVIS ASTSDTGNAGDLTIYASESVEVDGSNSVLRDHSRITASGQRFRPRYLQNRGLSAFPSGNGGNLTIISPTIKVSNEGYIAA ENIGSGNGGYLQIQTDSLLLEQQGQIRTAAASGQGGSLGLIVGDILLMRHNSLISARAGNNGNGGNITVISPLIVGLENS DIIANAVAGNGGKIQITTQGLLGLEFRDGETSESDITASSQFGVSGTVQINNVGVDPNSGLVELPENVTDPSQQIATGCS NTNSSSFVATGRGGVPQNPTQEVRSDRTWSDTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVNL QSSLTCTAFHKG
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75624; Mature: 75493
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSISHIDGLIQANGSANLFLLNPNGIIFGSNARLNIGGSFLGTTADSINFSDGFIFS CCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCEEEECCCEEECCCCCCCCCCCEEEE TTDTTTPSLLTMSVPIGLQMGQNSGSIQVQGQGHNLLHPTNFLAPVTRDPQLGGLRLFPG ECCCCCCEEEEEEECEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC KTLALLGNGIQLDAGVLIAESGHIELGSMTAGTVHLNTNTPIWKFDYHSGQILSDIYLTR CEEEEECCCEEEECCEEEEECCCEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHEEE AALIDTSGNPGGSIHLQGKDIHIQNSSSVFIQHQGQQRPGSIKINADLLAMSGALPQKNP EEEEECCCCCCCEEEEECCEEEEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCC SFILSENLGSGYGANIDVSARQLIVQDGGGILSTTYTNGGKGGDITVTAAESIQIIGFSP CEEEECCCCCCCCCEEECCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECEEEEEEECC INFRASGINSPSFPGGGKGGNISIATRDLIVKEGGTITSLVEGGGSGGNIHMTADIISLF CCEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHH GENPGSGGASAIATSTFFGGDGGVITINTRQLILRASGVISASTSDTGNAGDLTIYASES CCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCEEEECCCCCCCCCCEEEEECCE VEVDGSNSVLRDHSRITASGQRFRPRYLQNRGLSAFPSGNGGNLTIISPTIKVSNEGYIA EEECCCCCEEECCCEEEECCCCCCCHHHHCCCCEECCCCCCCEEEEEECEEEECCCCEEE AENIGSGNGGYLQIQTDSLLLEQQGQIRTAAASGQGGSLGLIVGDILLMRHNSLISARAG ECCCCCCCCCEEEEEECEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEECCCEEEEECC NNGNGGNITVISPLIVGLENSDIIANAVAGNGGKIQITTQGLLGLEFRDGETSESDITAS CCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCEEEC SQFGVSGTVQINNVGVDPNSGLVELPENVTDPSQQIATGCSNTNSSSFVATGRGGVPQNP CCCCCEEEEEEEEECCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCC TQEVRSDRTWSDTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVN HHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC LQSSLTCTAFHKG EECCEEEEEEECC >Mature Secondary Structure TGSSISHIDGLIQANGSANLFLLNPNGIIFGSNARLNIGGSFLGTTADSINFSDGFIFS CCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCEEEECCCEEECCCCCCCCCCCEEEE TTDTTTPSLLTMSVPIGLQMGQNSGSIQVQGQGHNLLHPTNFLAPVTRDPQLGGLRLFPG ECCCCCCEEEEEEECEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC KTLALLGNGIQLDAGVLIAESGHIELGSMTAGTVHLNTNTPIWKFDYHSGQILSDIYLTR CEEEEECCCEEEECCEEEEECCCEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHEEE AALIDTSGNPGGSIHLQGKDIHIQNSSSVFIQHQGQQRPGSIKINADLLAMSGALPQKNP EEEEECCCCCCCEEEEECCEEEEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCC SFILSENLGSGYGANIDVSARQLIVQDGGGILSTTYTNGGKGGDITVTAAESIQIIGFSP CEEEECCCCCCCCCEEECCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECEEEEEEECC INFRASGINSPSFPGGGKGGNISIATRDLIVKEGGTITSLVEGGGSGGNIHMTADIISLF CCEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHH GENPGSGGASAIATSTFFGGDGGVITINTRQLILRASGVISASTSDTGNAGDLTIYASES CCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCEEEECCCCCCCCCCEEEEECCE VEVDGSNSVLRDHSRITASGQRFRPRYLQNRGLSAFPSGNGGNLTIISPTIKVSNEGYIA EEECCCCCEEECCCEEEECCCCCCCHHHHCCCCEECCCCCCCEEEEEECEEEECCCCEEE AENIGSGNGGYLQIQTDSLLLEQQGQIRTAAASGQGGSLGLIVGDILLMRHNSLISARAG ECCCCCCCCCEEEEEECEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEECCCEEEEECC NNGNGGNITVISPLIVGLENSDIIANAVAGNGGKIQITTQGLLGLEFRDGETSESDITAS CCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCEEEC SQFGVSGTVQINNVGVDPNSGLVELPENVTDPSQQIATGCSNTNSSSFVATGRGGVPQNP CCCCCEEEEEEEEECCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCC TQEVRSDRTWSDTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVN HHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC LQSSLTCTAFHKG EECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA