| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232599
Identifier: 17232599
GI number: 17232599
Start: 6089742
End: 6092399
Strand: Reverse
Name: 17232599
Synonym: all5107
Alternate gene names: NA
Gene position: 6092399-6089742 (Counterclockwise)
Preceding gene: 17232600
Following gene: 17232598
Centisome position: 94.99
GC content: 42.48
Gene sequence:
>2658_bases ATGCAACTAAATTTTACTGGTTTAGCCTTAATTGGCACAATCTTCATATCTGCTATTGATAACAGTAGTGTTCACGCTCA AGTTATTCCTGATCCCACTCTCAACACCACTGTGACTGGTAGTAATCATTTCACCATCACCAATGGTAGCCGGGTAGGTA ATAATTTATTTCATAGCTTCAGCCAATTCTCGTTTCCTATCAACGGTTCGGCATTTTTCAACAATGCCGCAGATATACAG AATATTTTTAGTAGAGTAACAGGTGGCACTGTCTCCAACATTGATGGTCTAATTAGAGCCAATGGTAGTGCTAATTTATT TTTGCTCAATCCCAGTGGGATTATTTTTGGCAAAAATGCAAGTTTGAAAATTGGTGGTTCGTTTGTTGCTACTACTGCTG AAAGTATTAAATTTGCTGATGGATTTAAGTTTAGTGCTACAAGTCCACTGGATTCAGCTTTACTCACCTTGAGCGTGCCG ATTGGTTTGCAAATGGGCAGCAGTCCCAGTTCAATTAACGTTTATGGGTCAAAATTAGCAATTCCCGCGAGAAACACATT TGCACTAGTAGGAAATAACTTAACTTTTGACCAGAGTACAATTACTGCTACCGATGGCAGAGTTGAATTAGGGAGCGTTG CAGCAAATAATATTGTGGGACTGTCTGCAAACACTACTGGATTCAGCTTAGATTTCAATACTGTGGCTCAGTTCCAAGAT ATTAACTTTAGCAATGTAGCCAAGGTTGATACCAGTGGAAACCAAGGTGGGGCGATCGCTCTCCATGGGCAAAAAATAAC TTTGTCTGGTTCTTCAACTATCACTTCCCACACTTTAGGCACAAGTTCAGGACAAGGTATTCTAGTCAAAGCCTCTGAAT CCCTTGAACTTATTGGTCGCTCATCCCTTTCTAACACTGCAATTGCTACTCACTCTCAACCAACAGCTAGGGGACGGGGT GGTGATATAACAATTGAAACACCTCTTCTTAGTGTTTTAAATGGCGCACAAATTAACACCCGTACCAATGGAATTGGAGA TTCCGGCAATATTACAGTTAAAGCTACAACTGTTAATGTGATTGGGGAAGCCATCCATGCGCCGACAAAGCAGCGATTTA GCGTCAGTACACTAGCATCTAATACGATGAATGGTTCCCAAGGTCGAGGTGGTAATGTCACGATTGATGCCACCCAAGTC AATATTCGGGACGGTGGTGAATTACGCGCTACTGCTAGAGGAACTGGTGATGGTGGCAATATTATTGTCACAGCCAAGAA CTTAAGTGTGACAGGTGAAACTGCAACAGGTGAACCTGCATTTTTGACGGGGATGAGTACCAGTATCCGTGAATTTGCCA CAGGTAGGGGTGGAGATATAATTCTCAATGTCGGTAAACTAGAGGTCTTAAACGGCCCTGGTATTCGGACTGGTACTTAT GGTGAAGGTACATCAGGTAACATTATTGTTAATGCTGACGAAGTAATTTTGGGTGGCAGTTCGTCAACTGGAGTTGCCAC ACGATTTTTCGCATCAACAAATGGTAACTACGATTTCTCTACTGACAAACTGATTAGTCTGGGTCAGGGACAAGGTGGCG ACATTACTTTTAATGTTGGTAAGCTCAACTTACTGGACGGAGGGCGAATTTCCACCTCAACTGAAACCTATGGTAAAGCC GGAAATATTGCTATTCAAGCCAATTCCATCAATATTGCAGGTGTGAGTCAAGTACCAAGTGGGCAACTGCTTTACTCTCT GGATGCTACTGGCCCAAGTGGGTTGTATGCCTCCTCTACAGGCCCTGGTGTTGCGGGTTCCGTATATGTAACGACAAAAG ATTTGAGTCTTAGCGATCGCACCGAAATTGTAGTTAGCGGCAAAGGCACAGGAAATGCCGGCAATATGCTCATTCAGGCT AATTATTTGAAGTTGGATCTAGCTAGCAAACTTCGTTCTGAAGCCAATGCAGGCGAAGGAGGTAATATTGATCTGCAAGT GCGCGATGTCTTACTGATGCGTAATGGCAGTTTCATCAGTGCAGAGGCAGTTGGTAATGGCGGTAATATTAAAATTACAG CCCCAAATATTGTCGGTTTAGAAAACAGTGATGTTATTGCCAATGCCGTCCAAGGAAGGGGCGGTAATATTCATATTGCA ACTCAGGGAATCATTGGGTTGCAGTATCGCAATCTTCTCAATCCTAGAGAAGTTTTGACAAATGACATTACTGCTAGTTC CCAATTCAATGTCAATGGCACTGTGCAAATAAATAATATTGGTGTCGATCCAAATTCTGGGTTAGTAGAATTATCAGAAA ATCTCACCGACCCATCTCAACAAATCGCTAGTGGTTGTTCTAATAATACTGGTAGTAGCTTTGTTGCCACAGGCAAGGGT GGTGTGCCACAAAATCCTATGCAGGAAATGAGGAGCGATCGCACTTGGTCAGACATCCGCGATATCTCTGCATTCCACAA AACAGAATTAGTACAAGTACAAGCACAAACACCAAAATCTCCAGAATTACTGCTGCAAGCTAATTCCTGGCGACGTAATG CTAACGGCAAAATTGAATTAACTGCCAATCAATCTCCGACTCAGGTACAAACAGCCTTAACCTGTGCATCTGTACCTCAA AATAAATTAATGTTGTAA
Upstream 100 bases:
>100_bases AAAGGCTAAAAAGAACTCACCATAACATTACAAACTTCCTCAACTTGTAGCATTTTGCTTGGGAAAACTATACACAGGCT AGAAAATTAGAGATAAGTTG
Downstream 100 bases:
>100_bases AGTTTACTAAGCTGGGAATAATATATACGTAATAGAAACAAGAACTAGACTAATGAAATTCGCTTTTGTTGGCTTTGTTA TACTGAGTGCAATTTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MQLNFTGLALIGTIFISAIDNSSVHAQVIPDPTLNTTVTGSNHFTITNGSRVGNNLFHSFSQFSFPINGSAFFNNAADIQ NIFSRVTGGTVSNIDGLIRANGSANLFLLNPSGIIFGKNASLKIGGSFVATTAESIKFADGFKFSATSPLDSALLTLSVP IGLQMGSSPSSINVYGSKLAIPARNTFALVGNNLTFDQSTITATDGRVELGSVAANNIVGLSANTTGFSLDFNTVAQFQD INFSNVAKVDTSGNQGGAIALHGQKITLSGSSTITSHTLGTSSGQGILVKASESLELIGRSSLSNTAIATHSQPTARGRG GDITIETPLLSVLNGAQINTRTNGIGDSGNITVKATTVNVIGEAIHAPTKQRFSVSTLASNTMNGSQGRGGNVTIDATQV NIRDGGELRATARGTGDGGNIIVTAKNLSVTGETATGEPAFLTGMSTSIREFATGRGGDIILNVGKLEVLNGPGIRTGTY GEGTSGNIIVNADEVILGGSSSTGVATRFFASTNGNYDFSTDKLISLGQGQGGDITFNVGKLNLLDGGRISTSTETYGKA GNIAIQANSINIAGVSQVPSGQLLYSLDATGPSGLYASSTGPGVAGSVYVTTKDLSLSDRTEIVVSGKGTGNAGNMLIQA NYLKLDLASKLRSEANAGEGGNIDLQVRDVLLMRNGSFISAEAVGNGGNIKITAPNIVGLENSDVIANAVQGRGGNIHIA TQGIIGLQYRNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELSENLTDPSQQIASGCSNNTGSSFVATGKG GVPQNPMQEMRSDRTWSDIRDISAFHKTELVQVQAQTPKSPELLLQANSWRRNANGKIELTANQSPTQVQTALTCASVPQ NKLML
Sequences:
>Translated_885_residues MQLNFTGLALIGTIFISAIDNSSVHAQVIPDPTLNTTVTGSNHFTITNGSRVGNNLFHSFSQFSFPINGSAFFNNAADIQ NIFSRVTGGTVSNIDGLIRANGSANLFLLNPSGIIFGKNASLKIGGSFVATTAESIKFADGFKFSATSPLDSALLTLSVP IGLQMGSSPSSINVYGSKLAIPARNTFALVGNNLTFDQSTITATDGRVELGSVAANNIVGLSANTTGFSLDFNTVAQFQD INFSNVAKVDTSGNQGGAIALHGQKITLSGSSTITSHTLGTSSGQGILVKASESLELIGRSSLSNTAIATHSQPTARGRG GDITIETPLLSVLNGAQINTRTNGIGDSGNITVKATTVNVIGEAIHAPTKQRFSVSTLASNTMNGSQGRGGNVTIDATQV NIRDGGELRATARGTGDGGNIIVTAKNLSVTGETATGEPAFLTGMSTSIREFATGRGGDIILNVGKLEVLNGPGIRTGTY GEGTSGNIIVNADEVILGGSSSTGVATRFFASTNGNYDFSTDKLISLGQGQGGDITFNVGKLNLLDGGRISTSTETYGKA GNIAIQANSINIAGVSQVPSGQLLYSLDATGPSGLYASSTGPGVAGSVYVTTKDLSLSDRTEIVVSGKGTGNAGNMLIQA NYLKLDLASKLRSEANAGEGGNIDLQVRDVLLMRNGSFISAEAVGNGGNIKITAPNIVGLENSDVIANAVQGRGGNIHIA TQGIIGLQYRNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELSENLTDPSQQIASGCSNNTGSSFVATGKG GVPQNPMQEMRSDRTWSDIRDISAFHKTELVQVQAQTPKSPELLLQANSWRRNANGKIELTANQSPTQVQTALTCASVPQ NKLML >Mature_885_residues MQLNFTGLALIGTIFISAIDNSSVHAQVIPDPTLNTTVTGSNHFTITNGSRVGNNLFHSFSQFSFPINGSAFFNNAADIQ NIFSRVTGGTVSNIDGLIRANGSANLFLLNPSGIIFGKNASLKIGGSFVATTAESIKFADGFKFSATSPLDSALLTLSVP IGLQMGSSPSSINVYGSKLAIPARNTFALVGNNLTFDQSTITATDGRVELGSVAANNIVGLSANTTGFSLDFNTVAQFQD INFSNVAKVDTSGNQGGAIALHGQKITLSGSSTITSHTLGTSSGQGILVKASESLELIGRSSLSNTAIATHSQPTARGRG GDITIETPLLSVLNGAQINTRTNGIGDSGNITVKATTVNVIGEAIHAPTKQRFSVSTLASNTMNGSQGRGGNVTIDATQV NIRDGGELRATARGTGDGGNIIVTAKNLSVTGETATGEPAFLTGMSTSIREFATGRGGDIILNVGKLEVLNGPGIRTGTY GEGTSGNIIVNADEVILGGSSSTGVATRFFASTNGNYDFSTDKLISLGQGQGGDITFNVGKLNLLDGGRISTSTETYGKA GNIAIQANSINIAGVSQVPSGQLLYSLDATGPSGLYASSTGPGVAGSVYVTTKDLSLSDRTEIVVSGKGTGNAGNMLIQA NYLKLDLASKLRSEANAGEGGNIDLQVRDVLLMRNGSFISAEAVGNGGNIKITAPNIVGLENSDVIANAVQGRGGNIHIA TQGIIGLQYRNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELSENLTDPSQQIASGCSNNTGSSFVATGKG GVPQNPMQEMRSDRTWSDIRDISAFHKTELVQVQAQTPKSPELLLQANSWRRNANGKIELTANQSPTQVQTALTCASVPQ NKLML
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91321; Mature: 91321
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLNFTGLALIGTIFISAIDNSSVHAQVIPDPTLNTTVTGSNHFTITNGSRVGNNLFHSF CEEECHHHHHHEEEHEEEECCCCEEEEECCCCCCCEEEECCCEEEEECCCHHCHHHHHHH SQFSFPINGSAFFNNAADIQNIFSRVTGGTVSNIDGLIRANGSANLFLLNPSGIIFGKNA HHEECCCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCC SLKIGGSFVATTAESIKFADGFKFSATSPLDSALLTLSVPIGLQMGSSPSSINVYGSKLA CEEECCEEEEECHHHEEECCCCEECCCCCCCCEEEEEEECEEEEECCCCCEEEEECCEEE IPARNTFALVGNNLTFDQSTITATDGRVELGSVAANNIVGLSANTTGFSLDFNTVAQFQD ECCCCEEEEEECCEEECCCEEEECCCCEEECCEECCCEEEEECCCCEEEEEHHHHEEEEC INFSNVAKVDTSGNQGGAIALHGQKITLSGSSTITSHTLGTSSGQGILVKASESLELIGR CCCCCEEEEECCCCCCCEEEEECEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEC SSLSNTAIATHSQPTARGRGGDITIETPLLSVLNGAQINTRTNGIGDSGNITVKATTVNV CCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEEE IGEAIHAPTKQRFSVSTLASNTMNGSQGRGGNVTIDATQVNIRDGGELRATARGTGDGGN HHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCE IIVTAKNLSVTGETATGEPAFLTGMSTSIREFATGRGGDIILNVGKLEVLNGPGIRTGTY EEEEEECEEEECCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEECEEEEECCCCCCCCCC GEGTSGNIIVNADEVILGGSSSTGVATRFFASTNGNYDFSTDKLISLGQGQGGDITFNVG CCCCCCCEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEC KLNLLDGGRISTSTETYGKAGNIAIQANSINIAGVSQVPSGQLLYSLDATGPSGLYASST EEEEECCCEEECCCHHCCCCCCEEEEECCEEEEECCCCCCCCEEEEEECCCCCCEEECCC GPGVAGSVYVTTKDLSLSDRTEIVVSGKGTGNAGNMLIQANYLKLDLASKLRSEANAGEG CCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEHHHHHHHHCCCCCC GNIDLQVRDVLLMRNGSFISAEAVGNGGNIKITAPNIVGLENSDVIANAVQGRGGNIHIA CEEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEECCCCCEEEEHHCCCCCEEEEE TQGIIGLQYRNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELSENLTDPSQ ECCEEEEEHHHCCCHHHHHHCCCCCCCEECCCEEEEEEEECCCCCCCEEEECCCCCCHHH QIASGCSNNTGSSFVATGKGGVPQNPMQEMRSDRTWSDIRDISAFHKTELVQVQAQTPKS HHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEEECCCCC PELLLQANSWRRNANGKIELTANQSPTQVQTALTCASVPQNKLML CEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MQLNFTGLALIGTIFISAIDNSSVHAQVIPDPTLNTTVTGSNHFTITNGSRVGNNLFHSF CEEECHHHHHHEEEHEEEECCCCEEEEECCCCCCCEEEECCCEEEEECCCHHCHHHHHHH SQFSFPINGSAFFNNAADIQNIFSRVTGGTVSNIDGLIRANGSANLFLLNPSGIIFGKNA HHEECCCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCC SLKIGGSFVATTAESIKFADGFKFSATSPLDSALLTLSVPIGLQMGSSPSSINVYGSKLA CEEECCEEEEECHHHEEECCCCEECCCCCCCCEEEEEEECEEEEECCCCCEEEEECCEEE IPARNTFALVGNNLTFDQSTITATDGRVELGSVAANNIVGLSANTTGFSLDFNTVAQFQD ECCCCEEEEEECCEEECCCEEEECCCCEEECCEECCCEEEEECCCCEEEEEHHHHEEEEC INFSNVAKVDTSGNQGGAIALHGQKITLSGSSTITSHTLGTSSGQGILVKASESLELIGR CCCCCEEEEECCCCCCCEEEEECEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEC SSLSNTAIATHSQPTARGRGGDITIETPLLSVLNGAQINTRTNGIGDSGNITVKATTVNV CCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEEE IGEAIHAPTKQRFSVSTLASNTMNGSQGRGGNVTIDATQVNIRDGGELRATARGTGDGGN HHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCE IIVTAKNLSVTGETATGEPAFLTGMSTSIREFATGRGGDIILNVGKLEVLNGPGIRTGTY EEEEEECEEEECCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEECEEEEECCCCCCCCCC GEGTSGNIIVNADEVILGGSSSTGVATRFFASTNGNYDFSTDKLISLGQGQGGDITFNVG CCCCCCCEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEC KLNLLDGGRISTSTETYGKAGNIAIQANSINIAGVSQVPSGQLLYSLDATGPSGLYASST EEEEECCCEEECCCHHCCCCCCEEEEECCEEEEECCCCCCCCEEEEEECCCCCCEEECCC GPGVAGSVYVTTKDLSLSDRTEIVVSGKGTGNAGNMLIQANYLKLDLASKLRSEANAGEG CCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEHHHHHHHHCCCCCC GNIDLQVRDVLLMRNGSFISAEAVGNGGNIKITAPNIVGLENSDVIANAVQGRGGNIHIA CEEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEECCCCCEEEEHHCCCCCEEEEE TQGIIGLQYRNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELSENLTDPSQ ECCEEEEEHHHCCCHHHHHHCCCCCCCEECCCEEEEEEEECCCCCCCEEEECCCCCCHHH QIASGCSNNTGSSFVATGKGGVPQNPMQEMRSDRTWSDIRDISAFHKTELVQVQAQTPKS HHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEEECCCCC PELLLQANSWRRNANGKIELTANQSPTQVQTALTCASVPQNKLML CEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA