| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232575
Identifier: 17232575
GI number: 17232575
Start: 6054612
End: 6054839
Strand: Reverse
Name: 17232575
Synonym: asl5083
Alternate gene names: NA
Gene position: 6054839-6054612 (Counterclockwise)
Preceding gene: 17232577
Following gene: 17232574
Centisome position: 94.4
GC content: 42.98
Gene sequence:
>228_bases GTGGGCGATCGCTTCCCAGGCTTTTTCTGTAAATTGGTTGGGATTAGTTGGTTGCATAGGCTGATTGAGGGACGACCAAA TTTAAATGCTCAAATGCAGATAGAACAATTTGTTCTCATATCGTCATTTTACGGAGAGTTGCACCATCACCGGGATCGGT CTTCACGTCTTACTAGAGTAGTATTACTTCCCTATTTACTCATCCCTCTTGCAGCAGTAAGCAACTAA
Upstream 100 bases:
>100_bases TCAAAATCCCACTGGCCAAACCATCTTGTTCCAGTAGCGCCTTCATCAGGTGTTCGCTTTCTATCTGCTGCTGTTGATGC TGTTTAGCAATCTCAGGAGT
Downstream 100 bases:
>100_bases ATGGAGTTAATTGACTAAAAATTCCTCTAAATAAGTAGATAGGCGCATAACACGAAAAACATCTCTGGCGTAACTTCTAG ACAGTCTGATAAATCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN
Sequences:
>Translated_75_residues MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN >Mature_74_residues GDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRVVLLPYLLIPLAAVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8676; Mature: 8545
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLLPYLLIPLAAVSN HHHHHHHHHHHHCCC >Mature Secondary Structure GDRFPGFFCKLVGISWLHRLIEGRPNLNAQMQIEQFVLISSFYGELHHHRDRSSRLTRV CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLLPYLLIPLAAVSN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA