Click here to switch to the map view.

The map label for this gene is 17232574

Identifier: 17232574

GI number: 17232574

Start: 6053790

End: 6054416

Strand: Reverse

Name: 17232574

Synonym: all5082

Alternate gene names: NA

Gene position: 6054416-6053790 (Counterclockwise)

Preceding gene: 17232575

Following gene: 17232571

Centisome position: 94.4

GC content: 38.76

Gene sequence:

>627_bases
ATGACTCAAGCCATACCCAAGCTAGTAACTTTTGAGGAATTTGTCGATCGCCTACCTGAAAACTCCGGGATACGTTACGA
ACTACATAATGGAAGTATTGTTGAAATGGCACGACCTGTAGGAGACCATGAAGAAGTAAAGGGTTTTATAGCAAAAAAAA
TAACAGTGGAGTTTGCTCGATTAGACCTTCCTTTTATTATCCCCAACCAAGTTATAGTTAGACCTCTGGAAAAAGATTCT
GGCTATTTTCCCGATGTGTTGGTGCTAAATCAGACAAATCTAATAAATGAACCATTATGGAAAAAAGCATCTACCATTAG
TTTGGGCGTATCAATCCCCTTGGTAATTGAGGTTGTATCAACCAACTGGCGGGACGATTACTATTTGAAATATGCTGACT
ATGAAGAGATGGGTATCCCCGAATATTGGATTGTCGATTATGGGGCGTTGGGTGGACGTAATTTGATCGGTAATCCTAAA
CAACCAACAATCTCAGTCTGTAATTTAGTTGACGGGGAATATCAAATCAGTAAGTTTCGAGATAATGATGTTATTATCTC
CCAAACTTTTCCTGAATTAAATCTCACCCCCAACCAAATTTTTCAAGCTGGTTTGGTTAATTCGTAG

Upstream 100 bases:

>100_bases
AATATTCTCATCTTGATCAAGTCGTTGCTCATCAGTAGAGTTGCTCGAAGTAGATCTAGATTAGAGATAATATTTCCAAA
GCAGTAACTCTTTATCAGCT

Downstream 100 bases:

>100_bases
TTCGTCTCCTTAAAATGTAAATATCTCTGACAAGCTTCTCAAGATAGGATTGCAGCTTCCAAATGGATCACAATATCCTC
TTTTCTGACACCTCTAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTQAIPKLVTFEEFVDRLPENSGIRYELHNGSIVEMARPVGDHEEVKGFIAKKITVEFARLDLPFIIPNQVIVRPLEKDS
GYFPDVLVLNQTNLINEPLWKKASTISLGVSIPLVIEVVSTNWRDDYYLKYADYEEMGIPEYWIVDYGALGGRNLIGNPK
QPTISVCNLVDGEYQISKFRDNDVIISQTFPELNLTPNQIFQAGLVNS

Sequences:

>Translated_208_residues
MTQAIPKLVTFEEFVDRLPENSGIRYELHNGSIVEMARPVGDHEEVKGFIAKKITVEFARLDLPFIIPNQVIVRPLEKDS
GYFPDVLVLNQTNLINEPLWKKASTISLGVSIPLVIEVVSTNWRDDYYLKYADYEEMGIPEYWIVDYGALGGRNLIGNPK
QPTISVCNLVDGEYQISKFRDNDVIISQTFPELNLTPNQIFQAGLVNS
>Mature_207_residues
TQAIPKLVTFEEFVDRLPENSGIRYELHNGSIVEMARPVGDHEEVKGFIAKKITVEFARLDLPFIIPNQVIVRPLEKDSG
YFPDVLVLNQTNLINEPLWKKASTISLGVSIPLVIEVVSTNWRDDYYLKYADYEEMGIPEYWIVDYGALGGRNLIGNPKQ
PTISVCNLVDGEYQISKFRDNDVIISQTFPELNLTPNQIFQAGLVNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23576; Mature: 23445

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAIPKLVTFEEFVDRLPENSGIRYELHNGSIVEMARPVGDHEEVKGFIAKKITVEFAR
CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHEEEEEC
LDLPFIIPNQVIVRPLEKDSGYFPDVLVLNQTNLINEPLWKKASTISLGVSIPLVIEVVS
CCCCEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEC
TNWRDDYYLKYADYEEMGIPEYWIVDYGALGGRNLIGNPKQPTISVCNLVDGEYQISKFR
CCCCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
DNDVIISQTFPELNLTPNQIFQAGLVNS
CCCEEEEECCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TQAIPKLVTFEEFVDRLPENSGIRYELHNGSIVEMARPVGDHEEVKGFIAKKITVEFAR
CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHEEEEEC
LDLPFIIPNQVIVRPLEKDSGYFPDVLVLNQTNLINEPLWKKASTISLGVSIPLVIEVVS
CCCCEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEC
TNWRDDYYLKYADYEEMGIPEYWIVDYGALGGRNLIGNPKQPTISVCNLVDGEYQISKFR
CCCCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
DNDVIISQTFPELNLTPNQIFQAGLVNS
CCCEEEEECCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA