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The map label for this gene is atpC [H]

Identifier: 17232530

GI number: 17232530

Start: 6009574

End: 6009987

Strand: Reverse

Name: atpC [H]

Synonym: all5038

Alternate gene names: 17232530

Gene position: 6009987-6009574 (Counterclockwise)

Preceding gene: 17232531

Following gene: 17232529

Centisome position: 93.7

GC content: 50.24

Gene sequence:

>414_bases
ATGACCCTAACTGTCCGTGTAATTTCCCCAGATAAAACAGTGTGGGATGCGGAAGCTGATGAAGTGATTTTACCCAGCAC
TACCGGTCAGCTAGGTATCCTGAGTGGACACGCACCACTTTTAACCGCACTAGATACAGGCGTACTACGAGTACGCACCA
GCAAGAGTCAAAATTGGCAAGCGATCGCCCTATTGGGTGGCTTTGCCGAAGTTGAAGAAGATGAAGTCACCATTCTTGTC
AATGGTGGTGAACGCGGCGACACGATTAACCTAGAAGAAGCACGTACTGCTTACAGCCAAGCGCAAACAAAGCTGAATCA
AGTACCCGCAGGCGATCGTCAAGCCCAAATCCAAGCTAATCAAGCCTTTAAACGCGCCCGCGCTCGTTTTCAAGCGGCTG
GCGGTTTGGCATAA

Upstream 100 bases:

>100_bases
AGGCTAATTTGTTAGTAGTCAGTAGTCAGTAGTCAGTAGATTTGAAGGCTGACGACTGACGACTGACAACTGACAACTGA
CAATTCACAATGGAAGACTT

Downstream 100 bases:

>100_bases
AAAAATACAAGCAGAATTTTTTAGGGTGGGCAATTTGCTCATCCTTCTTTGTTTTAAGGATATGGGGTTTTGGGACAATA
CGGTTCAGTTAAGTCTAAAA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTLTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQAIALLGGFAEVEEDEVTILV
NGGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQANQAFKRARARFQAAGGLA

Sequences:

>Translated_137_residues
MTLTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQAIALLGGFAEVEEDEVTILV
NGGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQANQAFKRARARFQAAGGLA
>Mature_136_residues
TLTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQAIALLGGFAEVEEDEVTILVN
GGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQANQAFKRARARFQAAGGLA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 14657; Mature: 14525

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQ
CEEEEEEECCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHHCCCEEEEEECCCCCEE
AIALLGGFAEVEEDEVTILVNGGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQAN
EEEEECCCCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QAFKRARARFQAAGGLA
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQ
EEEEEEECCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHHCCCEEEEEECCCCCEE
AIALLGGFAEVEEDEVTILVNGGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQAN
EEEEECCCCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QAFKRARARFQAAGGLA
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA