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The map label for this gene is atpB [H]

Identifier: 17232531

GI number: 17232531

Start: 6010081

End: 6011529

Strand: Reverse

Name: atpB [H]

Synonym: all5039

Alternate gene names: 17232531

Gene position: 6011529-6010081 (Counterclockwise)

Preceding gene: 17232532

Following gene: 17232530

Centisome position: 93.73

GC content: 48.03

Gene sequence:

>1449_bases
ATGGTCACCACCGCAGAAAAAACAAACATCGGTTACATTACCCAAATCATTGGTCCGGTTGTAGACGTTAAATTCCCTAA
CGGAAAATTACCGCAAATCTACAACGCTCTGACCATCAAAGGCACTAACGAAGCTGGACAGCAACTCAACCTCACCGTAG
AAGTACAGCAACTTTTGGGCGACAACCAAATACGCGCCGTTGCTATGAGTTCCACGGATGGTTTAGTCCGTGGTCTGGAA
GTCGTCGATACAGGCGCTCCCATCAGCGTACCCGTTGGTAAAGCAACTCTCGGACGGATTTTCAACGTTCTTGGCGAACC
TGTAGACAACAGAGGCCCAGTCAACAACCAAGAAACCCTACCCATCCACCGTCCGGCTCCCAAATTAACCGAACTGGAAA
CTAAACCTTCCGTTTTCGAGACCGGGATTAAAGTTGTTGACCTCCTCACACCCTATCGACGCGGCGGTAAAATTGGTCTG
TTCGGCGGTGCGGGTGTCGGCAAAACCGTAATCATGATGGAGTTGATTAACAACATTGCAACCCAGCATGGTGGCGTGTC
TGTGTTCGCTGGCGTGGGAGAGCGTACCCGTGAAGGGAATGACCTCTACAACGAAATGATTGAATCTGGGGTAATCAACA
ACGAAAACCTCAACGAATCGAAGATTGCGTTGGTGTACGGTCAGATGAACGAACCACCCGGAGCAAGAATGCGGGTTGGT
TTGTCTGGTTTGACAATGGCTGAATACTTCCGTGATGTCAACAAGCAAGACGTATTGTTGTTTATTGACAACATTTTCCG
GTTCGTACAAGCAGGTTCTGAAGTATCAGCGTTGTTGGGTCGGATGCCTTCTGCTGTGGGATATCAGCCAACTTTGGGTA
CTGATGTAGGTCAATTGCAAGAACGGATTACATCTACTACCGAAGGTTCTATTACCTCAATTCAAGCTGTATATGTACCT
GCGGATGACTTGACAGACCCCGCACCTGCAACCACCTTTGCTCACTTAGATGGTACAACTGTACTATCTCGTGGCTTGGC
ATCTAAAGGTATTTATCCTGCGGTAGATCCGCTAGGTTCCACCTCTACCATGTTGCAACCCAACATTGTTGGTGACGAAC
ACTACAATACTGCTCGTGCTGTCCAATCGACCCTGCAACGCTACAAAGAATTGCAAGACATCATCGCTATTCTGGGTCTA
GATGAACTGTCTGAAGAAGACAGACTCATCGTAGCACGGGCCCGGAAAGTTGAGCGTTTCTTGTCTCAACCCTTCTTTGT
CGCTGAAGTATTCACAGGTTCTCCTGGTAAGTACGTGAAGTTAGAAGACACCATCAAAGGGTTCCAGAAGATTCTATCTG
GTGAGTTGGATGATCTGCCAGAGCAAGCCTTCTACTTGGTAGGCGACATCAACGAAGCGATCGCCAAAGCCGAAAAAATC
AAAGGCTAA

Upstream 100 bases:

>100_bases
AACTCTGTCCCCCTCCGGTGTTAGAGTGAAAGATGACATTGCATAATCTTATGTCTTCTAAGACCCATTCTGAAATATAG
CTTCAACCATTAGGCGCAGC

Downstream 100 bases:

>100_bases
TTTGTTAGTAGTCAGTAGTCAGTAGTCAGTAGATTTGAAGGCTGACGACTGACGACTGACAACTGACAACTGACAATTCA
CAATGGAAGACTTATGACCC

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MVTTAEKTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLGDNQIRAVAMSSTDGLVRGLE
VVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGL
FGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVG
LSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERITSTTEGSITSIQAVYVP
ADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGL
DELSEEDRLIVARARKVERFLSQPFFVAEVFTGSPGKYVKLEDTIKGFQKILSGELDDLPEQAFYLVGDINEAIAKAEKI
KG

Sequences:

>Translated_482_residues
MVTTAEKTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLGDNQIRAVAMSSTDGLVRGLE
VVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGL
FGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVG
LSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERITSTTEGSITSIQAVYVP
ADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGL
DELSEEDRLIVARARKVERFLSQPFFVAEVFTGSPGKYVKLEDTIKGFQKILSGELDDLPEQAFYLVGDINEAIAKAEKI
KG
>Mature_482_residues
MVTTAEKTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLGDNQIRAVAMSSTDGLVRGLE
VVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGL
FGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVG
LSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERITSTTEGSITSIQAVYVP
ADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGL
DELSEEDRLIVARARKVERFLSQPFFVAEVFTGSPGKYVKLEDTIKGFQKILSGELDDLPEQAFYLVGDINEAIAKAEKI
KG

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=470, Percent_Identity=69.1489361702128, Blast_Score=661, Evalue=0.0,
Organism=Homo sapiens, GI19913428, Length=449, Percent_Identity=26.7260579064588, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI19913426, Length=454, Percent_Identity=25.7709251101322, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI19913424, Length=301, Percent_Identity=28.2392026578073, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI50345984, Length=396, Percent_Identity=24.4949494949495, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4757810, Length=396, Percent_Identity=24.4949494949495, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1790170, Length=470, Percent_Identity=67.4468085106383, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=369, Percent_Identity=27.9132791327913, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790172, Length=430, Percent_Identity=24.4186046511628, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25144756, Length=470, Percent_Identity=67.0212765957447, Blast_Score=636, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17570191, Length=427, Percent_Identity=25.9953161592506, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17510931, Length=437, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17565854, Length=325, Percent_Identity=27.6923076923077, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=302, Percent_Identity=25.8278145695364, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988080, Length=302, Percent_Identity=25.8278145695364, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988074, Length=265, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322581, Length=475, Percent_Identity=66.7368421052632, Blast_Score=639, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=442, Percent_Identity=26.6968325791855, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6319370, Length=305, Percent_Identity=25.2459016393443, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6320016, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24638766, Length=470, Percent_Identity=67.6595744680851, Blast_Score=642, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=474, Percent_Identity=67.0886075949367, Blast_Score=637, Evalue=0.0,
Organism=Drosophila melanogaster, GI24583992, Length=325, Percent_Identity=28.3076923076923, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281361666, Length=438, Percent_Identity=25.5707762557078, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646341, Length=438, Percent_Identity=25.5707762557078, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17136796, Length=438, Percent_Identity=25.5707762557078, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI20129479, Length=337, Percent_Identity=27.893175074184, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24583988, Length=325, Percent_Identity=28, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24583986, Length=325, Percent_Identity=28, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24583984, Length=325, Percent_Identity=28, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24658560, Length=302, Percent_Identity=25.1655629139073, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24638768, Length=96, Percent_Identity=50, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 52017; Mature: 52017

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTAEKTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLG
CCCCCCCCCCHHHHHHHHCCEEEECCCCCCCHHHCEEEEECCCCCCCEEEEEEEHHHHHC
DNQIRAVAMSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETL
CCCEEEEEECCCCHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
TQHGGVSVFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVG
HCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEC
LSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQ
CCCCHHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
ERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGS
HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCC
TSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGLDELSEEDRLIVARARKVERF
CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH
LSQPFFVAEVFTGSPGKYVKLEDTIKGFQKILSGELDDLPEQAFYLVGDINEAIAKAEKI
HCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCHHCCCHHHEEEECCHHHHHHHHHHC
KG
CC
>Mature Secondary Structure
MVTTAEKTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLG
CCCCCCCCCCHHHHHHHHCCEEEECCCCCCCHHHCEEEEECCCCCCCEEEEEEEHHHHHC
DNQIRAVAMSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETL
CCCEEEEEECCCCHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
TQHGGVSVFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVG
HCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEC
LSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQ
CCCCHHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
ERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGS
HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCC
TSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGLDELSEEDRLIVARARKVERF
CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH
LSQPFFVAEVFTGSPGKYVKLEDTIKGFQKILSGELDDLPEQAFYLVGDINEAIAKAEKI
HCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCHHCCCHHHEEEECCHHHHHHHHHHC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA