| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is glkA [H]
Identifier: 17232494
GI number: 17232494
Start: 5974840
End: 5975775
Strand: Reverse
Name: glkA [H]
Synonym: all5002
Alternate gene names: 17232494
Gene position: 5975775-5974840 (Counterclockwise)
Preceding gene: 17232495
Following gene: 17232491
Centisome position: 93.17
GC content: 46.37
Gene sequence:
>936_bases ATGACTTCTGCTGTGGTGGTTTGGTGTGAGGAATTGAATGTGGGGAATTCTCAAGTAATTGGCATTGACTTGGGGGGAAC AGCAATTAAATTGGGGCGATTTAGCAAAGATGGGACTTGTTCACAATCTTTGACTGTGGCGACTCCCCAACCAGCAACCC CGGAAGCGGTTTTTCTGGTCATGGTGGATGCGATCGCGCAAATTGACCCAGATAATGAAACTATAGCTATTGGTGTGGGT ACTCCTGGCCCGGCTGATGCTCAAGGACGCATTGCTCAAATTGCTATTAACTTACCGCAATGGGAAAATGTACCTTTGGC GGATTGGTTAGAAGCGAAAACTAACAAGCCGACAGTAATTGAAAATGATGCCAACTGTGCGGGAATCGCTGAGGCTTGGT TAGGAGCCGGTCGCCACTGCCAAAACTTTATCATGTTAACTTTGGGGACTGGTGTTGGTGGCGCAATTTTTTTAGATGGC AAATTATTTGTCGGACATCGTGGCGCAGCTGGTGAACTGGGACTAATTACACTCCAACCCGATGGCCCTATGTGTAAAAG CGGCAACCCTGGTTCTTTAGAGCAGTACACTTCCATTAAAGCTATTCGTCGCCTGACTGGTAAAGAACCTGCGGAATTAG GTATGCTAGCTCAAGCTGGAGATCCAGAAGCCTTACAATTTTGGCAAGAATACGGACAAAATTTAGGTATAGGTTTAACG AGTTTAATTTATGTTCTCACACCACAGGCGATCGTGCTTGGCGGTGGTGTAAGTGCCAGCTGTGAATTTTTCTTACCAAC TCTCAAAGCCGAAATCGAAAAGCGAGTTATGTCCACATCTCGCGCAGGGTTACAAATCTTGCCAGCAGAGTTAGGTAACT CAGCCGGAATGGTAGGCGCAGCAAGATTAGCTTGGGAAAAGTTTGGTAATTGGTAA
Upstream 100 bases:
>100_bases ACTGAGAACTTAGAATTTTTTGGCCCAGAAATCCCAAAAAGCTAATATGCTTTTGTGAAATACCCTAAATGGGTAATTAT CGTCAGCTTCATCAAAGCTG
Downstream 100 bases:
>100_bases TGGGTGATTCAAAACTATTGACTATCGACTAAGAAAAAGAATGTCCTGTGGTTTTTTGGACGTATTGCAAAACTTTCTTA TAAGAATCTGGGCTACTGAC
Product: sugar kinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTSAVVVWCEELNVGNSQVIGIDLGGTAIKLGRFSKDGTCSQSLTVATPQPATPEAVFLVMVDAIAQIDPDNETIAIGVG TPGPADAQGRIAQIAINLPQWENVPLADWLEAKTNKPTVIENDANCAGIAEAWLGAGRHCQNFIMLTLGTGVGGAIFLDG KLFVGHRGAAGELGLITLQPDGPMCKSGNPGSLEQYTSIKAIRRLTGKEPAELGMLAQAGDPEALQFWQEYGQNLGIGLT SLIYVLTPQAIVLGGGVSASCEFFLPTLKAEIEKRVMSTSRAGLQILPAELGNSAGMVGAARLAWEKFGNW
Sequences:
>Translated_311_residues MTSAVVVWCEELNVGNSQVIGIDLGGTAIKLGRFSKDGTCSQSLTVATPQPATPEAVFLVMVDAIAQIDPDNETIAIGVG TPGPADAQGRIAQIAINLPQWENVPLADWLEAKTNKPTVIENDANCAGIAEAWLGAGRHCQNFIMLTLGTGVGGAIFLDG KLFVGHRGAAGELGLITLQPDGPMCKSGNPGSLEQYTSIKAIRRLTGKEPAELGMLAQAGDPEALQFWQEYGQNLGIGLT SLIYVLTPQAIVLGGGVSASCEFFLPTLKAEIEKRVMSTSRAGLQILPAELGNSAGMVGAARLAWEKFGNW >Mature_310_residues TSAVVVWCEELNVGNSQVIGIDLGGTAIKLGRFSKDGTCSQSLTVATPQPATPEAVFLVMVDAIAQIDPDNETIAIGVGT PGPADAQGRIAQIAINLPQWENVPLADWLEAKTNKPTVIENDANCAGIAEAWLGAGRHCQNFIMLTLGTGVGGAIFLDGK LFVGHRGAAGELGLITLQPDGPMCKSGNPGSLEQYTSIKAIRRLTGKEPAELGMLAQAGDPEALQFWQEYGQNLGIGLTS LIYVLTPQAIVLGGGVSASCEFFLPTLKAEIEKRVMSTSRAGLQILPAELGNSAGMVGAARLAWEKFGNW
Specific function: Required for glucose repression of many different genes [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=283, Percent_Identity=26.5017667844523, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI298566325, Length=266, Percent_Identity=27.4436090225564, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI190014632, Length=266, Percent_Identity=27.4436090225564, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI4885285, Length=266, Percent_Identity=27.4436090225564, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1786891, Length=305, Percent_Identity=26.2295081967213, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787363, Length=301, Percent_Identity=28.2392026578073, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787878, Length=244, Percent_Identity=25.8196721311475, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790522, Length=299, Percent_Identity=26.4214046822742, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081733, Length=302, Percent_Identity=26.8211920529801, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI87082230, Length=244, Percent_Identity=28.2786885245902, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87082127, Length=215, Percent_Identity=23.2558139534884, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 32585; Mature: 32454
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAVVVWCEELNVGNSQVIGIDLGGTAIKLGRFSKDGTCSQSLTVATPQPATPEAVFLV CCCEEEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHH MVDAIAQIDPDNETIAIGVGTPGPADAQGRIAQIAINLPQWENVPLADWLEAKTNKPTVI HHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEE ENDANCAGIAEAWLGAGRHCQNFIMLTLGTGVGGAIFLDGKLFVGHRGAAGELGLITLQP ECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCEEEEECCCCCCCEEEEEECC DGPMCKSGNPGSLEQYTSIKAIRRLTGKEPAELGMLAQAGDPEALQFWQEYGQNLGIGLT CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCEEECCCCHHHHHHHHHHCCCCCCCHH SLIYVLTPQAIVLGGGVSASCEFFLPTLKAEIEKRVMSTSRAGLQILPAELGNSAGMVGA HHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHH ARLAWEKFGNW HHHHHHHHCCC >Mature Secondary Structure TSAVVVWCEELNVGNSQVIGIDLGGTAIKLGRFSKDGTCSQSLTVATPQPATPEAVFLV CCEEEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHH MVDAIAQIDPDNETIAIGVGTPGPADAQGRIAQIAINLPQWENVPLADWLEAKTNKPTVI HHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEE ENDANCAGIAEAWLGAGRHCQNFIMLTLGTGVGGAIFLDGKLFVGHRGAAGELGLITLQP ECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCEEEEECCCCCCCEEEEEECC DGPMCKSGNPGSLEQYTSIKAIRRLTGKEPAELGMLAQAGDPEALQFWQEYGQNLGIGLT CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCEEECCCCHHHHHHHHHHCCCCCCCHH SLIYVLTPQAIVLGGGVSASCEFFLPTLKAEIEKRVMSTSRAGLQILPAELGNSAGMVGA HHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHH ARLAWEKFGNW HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435260; 12000953 [H]