| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is kojP [H]
Identifier: 17232481
GI number: 17232481
Start: 5959869
End: 5962148
Strand: Reverse
Name: kojP [H]
Synonym: all4989
Alternate gene names: 17232481
Gene position: 5962148-5959869 (Counterclockwise)
Preceding gene: 17232483
Following gene: 17232480
Centisome position: 92.96
GC content: 45.13
Gene sequence:
>2280_bases ATGCTTGACGACGTAGATATATCGGTGGAAAATTCCCTTGAGCCATTGCTAGATTCCCATGAATGGAATGTGATTGAGAC AGAATTTAACCCTACACAACTACACCATAAAGAAACTGTTTTCACTCTCAGCAATGGTTATCTAGGAACCAGGGGAAGTT TGGAGGAAGGATATCAAGAAGATTTTCCCGCCACAATGATTCATGGCATTTATGACGATACGCAAATTTCCCACACAGAA TTGGTAAATTGTCCTCACTGGCTGCCGTTGGTAGTGGAGGTGGCAGGTGAACGATTTAGCATGAATTCGGGGGAAGTTCT CCATTACGAGCGTCGGTTGGACTTGCGCTTGGGTTTACTTAGTCGTGATGTGCGGTGGCGTTCTCCCCAAGGCCATACCT TAGACTTACACTTTGAGCGTTTTGCTAGTTTGGCAGATCAACACGTATTGGCGATTCGTTGTCAAATCACATCTGTAGAT TTTACAGGTGAAATTACCGTGACAGCGCGATTTGATGCGGAACCAAAAACCCAAGGCGTTCCCCATTGGCAGACTTTAAA CCAAGGAGGCGTAGACCAGATTCTTTGGTTACAAAGTCAAACCCTGCATTCTGGTGTTGGCTTGGGGATGAGTGCCAAGT TAATCATAGATGGTGATGAGACTGCGGTTGTTTCTGTCAAAAATGCCGGTATTCCAACTTTGGAGACTACTTTTGAATGT AACCCAGGAAAAACAGTCATTGTGGAAAAAATTGTGACTGTGTTTACTTCCAGAGAAACAGAAACTCCAATTGCCGCCGC ACTAGAAAGATTAGCTGATGAACCCAGATACACAACCCTATTAGCTGCCCATATTGCCGCTTGGGAGCAAGTTTGGCAAA ATAGCGACATTATTATTGAAGGCGATCGCCAAGCCCAACTCAGTGTCCGTTACAATCTTTTTCAGTTACTATCCGTAGCA CCACGCCACGACGATCATGTAAGTATAGCCCCTAAAACTCTGTCTGGCTTTGCCTATAGCGGACACATTTTTTGGGACAC CGAAATATTTATCCTCCCCTTCCTCACATTCACCCAACCAGATTTAGCGCGAAACTTACTCACCTACCGCTACCACACCT TACCAGGCGCAAGACGCAAAGCCCAAGAAGCTGGTTATCAAGGAGCAATGTTCGCTTGGGAAAGTGCTACCACAGGTGAT GAAGTTACCCCTCGGTGGGTTCCTGGTGCTAATGGTGAATTAATTAGAATTTGGTGCGGTGATCTTGAAGTACACATTAC AGCCGATGTGGCTTATGCAGTTTGGCACTACTGGCAAACTACCAACGATGATGAATGGATGCACGACTATGGTGCAGAAA TAATTCTCGATACAGCCGTGTTTTGGGAAAGTCGCGTCCAGTGGAACGAACAACGCCACAGCTACGACATTCTCGATGTA ATTGGCCCCGATGAAAACCACGATCGCGTCAATAATAACGCCTTTACCAACCTCATGGTACAGTGGCACTTACAATCAGC TTTAGCCCTGTGGGATTGGTTCAAACACGTTTATCCCGAAAAAGCCGCGCAACTAGTAGAACAACTTAACCTAACTACAG AACGTCTACACTGTTGGGCAGAAATTCAAGAACGTATCTTTGTCAATGAAGATTTAACTACAGGTTTAATCGAACAATTT GAAGGCTTTTTTCAATTAGAAGATGTCAACCTAGCTGATTACGAACCCCGCACAAAATCTTTGCAAGGTTTGTTAGGGAT TGAAGCCACTAGTCAAAAGCAAATACTCAAGCAGCCTGATGTGTTGATGCTACTTTACTTGCTACGTCAGGCTTATGACT ATAACACCCTCAAGGTTAACTGGGACTATTACACCCAACGCACCGACCATACTTATGGTTCTTCACTAGGCCCAGCAATT CATGCCGTCTTAGCTTGCGATCTTAATAACCCTACAGAAGCCTACACTCATTTTTTAAGAGCTGCGTTAGTAGATTTAGA AGATGTCAGACTCAACGCCGCCGAGGGAATCCACGCCGCCAGCGCAGGAGGAGTTTGGCAAGCTGTTGTTTTAGGGTTCG GGGGTGTGAGAATGACTCAATTTGGCCCGATGGCTTGTCCTAATCTCCCGCCAACTTGGAAACGCTTGAAATTTAAGCTG CAATGGCGCAATGAATGGTACGAGTTTGATTTACAACCAGAAACAGCAATGGCAATGGTGACACAGGAAGCTCAAGTTCC TGTTTTTGCCACTGTACAAGCTGTAATGAGTAATGGGTAA
Upstream 100 bases:
>100_bases ACGTATCAACAGTGAAAGCCAGGATTTTGTTATCTATGAATCCTATCGATTATGTTTCATCTTGACAACAGCCATCTGCA AATTTTAGGTTTTCTAACTC
Downstream 100 bases:
>100_bases TGGGTAATGGGTAATGGGTAATGGGTAATTAGTTTTTCCCATTACCAATTAGTATGAGGGGTTGACTCTCCATCCAACTA GAGAGTTCACAATAGGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MLDDVDISVENSLEPLLDSHEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSLEEGYQEDFPATMIHGIYDDTQISHTE LVNCPHWLPLVVEVAGERFSMNSGEVLHYERRLDLRLGLLSRDVRWRSPQGHTLDLHFERFASLADQHVLAIRCQITSVD FTGEITVTARFDAEPKTQGVPHWQTLNQGGVDQILWLQSQTLHSGVGLGMSAKLIIDGDETAVVSVKNAGIPTLETTFEC NPGKTVIVEKIVTVFTSRETETPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PRHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPDLARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELIRIWCGDLEVHITADVAYAVWHYWQTTNDDEWMHDYGAEIILDTAVFWESRVQWNEQRHSYDILDV IGPDENHDRVNNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVEQLNLTTERLHCWAEIQERIFVNEDLTTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPPTWKRLKFKL QWRNEWYEFDLQPETAMAMVTQEAQVPVFATVQAVMSNG
Sequences:
>Translated_759_residues MLDDVDISVENSLEPLLDSHEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSLEEGYQEDFPATMIHGIYDDTQISHTE LVNCPHWLPLVVEVAGERFSMNSGEVLHYERRLDLRLGLLSRDVRWRSPQGHTLDLHFERFASLADQHVLAIRCQITSVD FTGEITVTARFDAEPKTQGVPHWQTLNQGGVDQILWLQSQTLHSGVGLGMSAKLIIDGDETAVVSVKNAGIPTLETTFEC NPGKTVIVEKIVTVFTSRETETPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PRHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPDLARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELIRIWCGDLEVHITADVAYAVWHYWQTTNDDEWMHDYGAEIILDTAVFWESRVQWNEQRHSYDILDV IGPDENHDRVNNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVEQLNLTTERLHCWAEIQERIFVNEDLTTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPPTWKRLKFKL QWRNEWYEFDLQPETAMAMVTQEAQVPVFATVQAVMSNG >Mature_759_residues MLDDVDISVENSLEPLLDSHEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSLEEGYQEDFPATMIHGIYDDTQISHTE LVNCPHWLPLVVEVAGERFSMNSGEVLHYERRLDLRLGLLSRDVRWRSPQGHTLDLHFERFASLADQHVLAIRCQITSVD FTGEITVTARFDAEPKTQGVPHWQTLNQGGVDQILWLQSQTLHSGVGLGMSAKLIIDGDETAVVSVKNAGIPTLETTFEC NPGKTVIVEKIVTVFTSRETETPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PRHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPDLARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELIRIWCGDLEVHITADVAYAVWHYWQTTNDDEWMHDYGAEIILDTAVFWESRVQWNEQRHSYDILDV IGPDENHDRVNNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVEQLNLTTERLHCWAEIQERIFVNEDLTTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPPTWKRLKFKL QWRNEWYEFDLQPETAMAMVTQEAQVPVFATVQAVMSNG
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=444, Percent_Identity=29.954954954955, Blast_Score=159, Evalue=8e-39, Organism=Escherichia coli, GI1787575, Length=714, Percent_Identity=31.7927170868347, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6325283, Length=521, Percent_Identity=23.4165067178503, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24583760, Length=309, Percent_Identity=30.42071197411, Blast_Score=133, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 86311; Mature: 86311
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDVDISVENSLEPLLDSHEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSLEEGYQE CCCCCEEECCCCCHHHHCCCCCCEEEECCCCHHCCCCEEEEEEECCCCCCCCCHHHCHHH DFPATMIHGIYDDTQISHTELVNCPHWLPLVVEVAGERFSMNSGEVLHYERRLDLRLGLL CCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHCCCEECCCCCCEEEEEECCCEEECHH SRDVRWRSPQGHTLDLHFERFASLADQHVLAIRCQITSVDFTGEITVTARFDAEPKTQGV CCCCEECCCCCCEEEEEHHHHHHHHCCEEEEEEEEEEEEEECEEEEEEEEECCCCCCCCC PHWQTLNQGGVDQILWLQSQTLHSGVGLGMSAKLIIDGDETAVVSVKNAGIPTLETTFEC CCHHHCCCCCCCCEEEEEHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEEEC NPGKTVIVEKIVTVFTSRETETPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIE CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE GDRQAQLSVRYNLFQLLSVAPRHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQP CCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCHHCCEEEECEEEECCEEEEEEEECCCCH DLARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGDEVTPRWVPGANGELIRIWCG HHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEC DLEVHITADVAYAVWHYWQTTNDDEWMHDYGAEIILDTAVFWESRVQWNEQRHSYDILDV CEEEEEEEHHHEEHHHHHCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHCHHCCCEEEEEE IGPDENHDRVNNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVEQLNLTTERLHCWA CCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH EIQERIFVNEDLTTGLIEQFEGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPD HHHHHEEECCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC VLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAIHAVLACDLNNPTEAYTHFLR HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHH AALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPPTWKRLKFKL HHHHCHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHEEEEE QWRNEWYEFDLQPETAMAMVTQEAQVPVFATVQAVMSNG EECCCEEEEECCCCHHHHEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLDDVDISVENSLEPLLDSHEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSLEEGYQE CCCCCEEECCCCCHHHHCCCCCCEEEECCCCHHCCCCEEEEEEECCCCCCCCCHHHCHHH DFPATMIHGIYDDTQISHTELVNCPHWLPLVVEVAGERFSMNSGEVLHYERRLDLRLGLL CCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHCCCEECCCCCCEEEEEECCCEEECHH SRDVRWRSPQGHTLDLHFERFASLADQHVLAIRCQITSVDFTGEITVTARFDAEPKTQGV CCCCEECCCCCCEEEEEHHHHHHHHCCEEEEEEEEEEEEEECEEEEEEEEECCCCCCCCC PHWQTLNQGGVDQILWLQSQTLHSGVGLGMSAKLIIDGDETAVVSVKNAGIPTLETTFEC CCHHHCCCCCCCCEEEEEHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEEEC NPGKTVIVEKIVTVFTSRETETPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIE CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE GDRQAQLSVRYNLFQLLSVAPRHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQP CCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCHHCCEEEECEEEECCEEEEEEEECCCCH DLARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGDEVTPRWVPGANGELIRIWCG HHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEC DLEVHITADVAYAVWHYWQTTNDDEWMHDYGAEIILDTAVFWESRVQWNEQRHSYDILDV CEEEEEEEHHHEEHHHHHCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHCHHCCCEEEEEE IGPDENHDRVNNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVEQLNLTTERLHCWA CCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH EIQERIFVNEDLTTGLIEQFEGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPD HHHHHEEECCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC VLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAIHAVLACDLNNPTEAYTHFLR HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHH AALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPPTWKRLKFKL HHHHCHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHEEEEE QWRNEWYEFDLQPETAMAMVTQEAQVPVFATVQAVMSNG EECCCEEEEECCCCHHHHEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA