Click here to switch to the map view.

The map label for this gene is desC

Identifier: 17232483

GI number: 17232483

Start: 5963080

End: 5963937

Strand: Reverse

Name: desC

Synonym: all4991

Alternate gene names: NA

Gene position: 5963937-5963080 (Counterclockwise)

Preceding gene: 17232486

Following gene: 17232481

Centisome position: 92.99

GC content: 44.41

Gene sequence:

>858_bases
ATGACCGTAAAACATCTGGCAATCGCCCCTGAGGGGAAGAAGTCATTGCGCCTCAGTTGGACAAACGTGGCATTTTTTAC
CACAATTCACGCTCTAGCTTTGTTGGCTCCTTGGTTTTTTTCCTGGTCAGCATTGGGTTTGCTGTTGTTTCTCCACTGGT
TGTTTGGCAGTATTGGTATTTGCCTTGGGTACCACAGATTACTTAGTCACAAGAGTTTTCAAGTACCCAAATGGCTGGAA
TATGCGATCGCCACTATCGGTGCATTGGCTATGCAGGGAGGGCCAATTTTTTGGATTGGAGGACATCGCCAGCATCATGC
TCACACCGAAGATGTCTATCTAGATCCATACTCTTCCCAGCGTGGATTTTGGTGGAGCCATATGTTGTGGATTTTATATC
CTCGCTCCGAATTTTTCGACTATGAAATCTATCAAAAGTATGCGCCTGATTTAGCAAGACAACCATTCTATCGTTGGTTA
GATCGTTATTTTCTCCTGTTGCAAATTCCTTTTGGATTAATGCTTTACGCTATCGGAGGATGGTCTTTCGTCATCTATGG
TGTAGTTCTCAGAGCAGTATTGCTATGGCACTCTACTTGGTTTGTCAACTCTGCCACCCATATGTGGGGCTATCGTACCT
TTAACGCTGATGATAATGCACGTAATTTGTGGTGGGTATCTATAGTAACCTATGGCGAAGGTTGGCACAACAACCATCAC
ACTTACCCCAACGTAGCCAAAGCTGGGTTCCAGTGGTGGGAAGTTGATGTCACTTGGTGGAGTATTAAACTGTTGCAGAC
TTTAGGTTTGGCGAAGAAAGTAGTTTTACCGCCATCACAAAGAATGAATCAAGGTTGA

Upstream 100 bases:

>100_bases
GCTTAATTTTGTAGTTTGCTTCCCGTGGGGTATTTTGAATTGGTATGATGCACCAGGTACAAGAGCAAATCGCTACCTGA
TCCATTAATTAGGAATTGTT

Downstream 100 bases:

>100_bases
ATCAGAATTGCCTAATTTTGCTGGCGCAGCCTACTCTTCTCCTTCTCCTGTCGGAGACGCTAACGCGAACGAGAACGCTA
CGCGAACCCGTAGGGTATGA

Product: delta-9 desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTVKHLAIAPEGKKSLRLSWTNVAFFTTIHALALLAPWFFSWSALGLLLFLHWLFGSIGICLGYHRLLSHKSFQVPKWLE
YAIATIGALAMQGGPIFWIGGHRQHHAHTEDVYLDPYSSQRGFWWSHMLWILYPRSEFFDYEIYQKYAPDLARQPFYRWL
DRYFLLLQIPFGLMLYAIGGWSFVIYGVVLRAVLLWHSTWFVNSATHMWGYRTFNADDNARNLWWVSIVTYGEGWHNNHH
TYPNVAKAGFQWWEVDVTWWSIKLLQTLGLAKKVVLPPSQRMNQG

Sequences:

>Translated_285_residues
MTVKHLAIAPEGKKSLRLSWTNVAFFTTIHALALLAPWFFSWSALGLLLFLHWLFGSIGICLGYHRLLSHKSFQVPKWLE
YAIATIGALAMQGGPIFWIGGHRQHHAHTEDVYLDPYSSQRGFWWSHMLWILYPRSEFFDYEIYQKYAPDLARQPFYRWL
DRYFLLLQIPFGLMLYAIGGWSFVIYGVVLRAVLLWHSTWFVNSATHMWGYRTFNADDNARNLWWVSIVTYGEGWHNNHH
TYPNVAKAGFQWWEVDVTWWSIKLLQTLGLAKKVVLPPSQRMNQG
>Mature_284_residues
TVKHLAIAPEGKKSLRLSWTNVAFFTTIHALALLAPWFFSWSALGLLLFLHWLFGSIGICLGYHRLLSHKSFQVPKWLEY
AIATIGALAMQGGPIFWIGGHRQHHAHTEDVYLDPYSSQRGFWWSHMLWILYPRSEFFDYEIYQKYAPDLARQPFYRWLD
RYFLLLQIPFGLMLYAIGGWSFVIYGVVLRAVLLWHSTWFVNSATHMWGYRTFNADDNARNLWWVSIVTYGEGWHNNHHT
YPNVAKAGFQWWEVDVTWWSIKLLQTLGLAKKVVLPPSQRMNQG

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=288, Percent_Identity=27.7777777777778, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI148596961, Length=267, Percent_Identity=27.3408239700375, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17561776, Length=258, Percent_Identity=28.6821705426357, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17561774, Length=255, Percent_Identity=28.6274509803922, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17540878, Length=206, Percent_Identity=29.126213592233, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321383, Length=270, Percent_Identity=31.1111111111111, Blast_Score=115, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24646500, Length=252, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646303, Length=281, Percent_Identity=28.1138790035587, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646299, Length=281, Percent_Identity=28.1138790035587, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646305, Length=281, Percent_Identity=28.1138790035587, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646301, Length=281, Percent_Identity=28.1138790035587, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646297, Length=281, Percent_Identity=28.1138790035587, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24662393, Length=271, Percent_Identity=29.8892988929889, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24646295, Length=281, Percent_Identity=26.6903914590747, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI21358571, Length=220, Percent_Identity=28.6363636363636, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21358573, Length=237, Percent_Identity=29.957805907173, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33469; Mature: 33338

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKHLAIAPEGKKSLRLSWTNVAFFTTIHALALLAPWFFSWSALGLLLFLHWLFGSIGI
CCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLGYHRLLSHKSFQVPKWLEYAIATIGALAMQGGPIFWIGGHRQHHAHTEDVYLDPYSSQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCC
RGFWWSHMLWILYPRSEFFDYEIYQKYAPDLARQPFYRWLDRYFLLLQIPFGLMLYAIGG
CCCHHHEEEEEEECCCHHCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WSFVIYGVVLRAVLLWHSTWFVNSATHMWGYRTFNADDNARNLWWVSIVTYGEGWHNNHH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
TYPNVAKAGFQWWEVDVTWWSIKLLQTLGLAKKVVLPPSQRMNQG
CCCCHHHCCCEEEEEEEEHHHHHHHHHHCCHHEEECCCHHHCCCC
>Mature Secondary Structure 
TVKHLAIAPEGKKSLRLSWTNVAFFTTIHALALLAPWFFSWSALGLLLFLHWLFGSIGI
CCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLGYHRLLSHKSFQVPKWLEYAIATIGALAMQGGPIFWIGGHRQHHAHTEDVYLDPYSSQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCC
RGFWWSHMLWILYPRSEFFDYEIYQKYAPDLARQPFYRWLDRYFLLLQIPFGLMLYAIGG
CCCHHHEEEEEEECCCHHCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WSFVIYGVVLRAVLLWHSTWFVNSATHMWGYRTFNADDNARNLWWVSIVTYGEGWHNNHH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
TYPNVAKAGFQWWEVDVTWWSIKLLQTLGLAKKVVLPPSQRMNQG
CCCCHHHCCCEEEEEEEEHHHHHHHHHHCCHHEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA