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The map label for this gene is padR [H]

Identifier: 17232464

GI number: 17232464

Start: 5936120

End: 5936659

Strand: Reverse

Name: padR [H]

Synonym: all4972

Alternate gene names: 17232464

Gene position: 5936659-5936120 (Counterclockwise)

Preceding gene: 17232470

Following gene: 17232463

Centisome position: 92.56

GC content: 40.0

Gene sequence:

>540_bases
ATGGGTTTATCGCAAGCAATCCTGACCTGTTTAATTGATGCTCCCCACAGTGGTTATGATCTTTCTAAAGTTTTCAGCGA
ATCTGTAGGTTATTTTTGGCAAGCTTCCCAGCAACAAATCTACAGAGAACTAGGTAAACTGGAGTCTGCTGGTTTGATTG
TGTCCGAGGTGATTCCCCGTGAAGGTCGCCTTGATAAAAAAGTTTACTCAATCACCGAACAGGGAAAGCAGCAGCTGATT
GAGTGGATGCACAAACCCAGCGAACCTGATGTAATCAGAGAAGATTTGTTAGTCAAAATTTTTTCCGGTGGTCTAGTACC
AGTCAGTCTATTGATAGAAGATGTCACACGTCATCGCCGAATCCATTTAGAAAAATTACTTACCTATGGAGAGATTGAAA
AAGAGAAATTTCCATACCCGAAAGAACTCAATAAGGAAGAAAAATTGAGAACTTTAGTTTTAAAGGCGGGTATTAAATAT
GAGCAAGCCTGGATAGAGTGGTGTGATGATGCGCTTGAAGTTTTAAAAAATCTACCATAG

Upstream 100 bases:

>100_bases
ATTTACTGTATACAACATTTTATAATCATAAAATTTTATTCAACTTGTTGTATACAAGCTCTAGTGTACACTTAAGAAAA
TATCTGTCAAGTAGTTCTTT

Downstream 100 bases:

>100_bases
GAAGGAAGATAATTATGCTAAATATTTAATATTGACAAAATAAAACCCCAGAAATGAAAAATTCCAGGGTTATCCTCGTG
AACCACAGTTTTATTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MGLSQAILTCLIDAPHSGYDLSKVFSESVGYFWQASQQQIYRELGKLESAGLIVSEVIPREGRLDKKVYSITEQGKQQLI
EWMHKPSEPDVIREDLLVKIFSGGLVPVSLLIEDVTRHRRIHLEKLLTYGEIEKEKFPYPKELNKEEKLRTLVLKAGIKY
EQAWIEWCDDALEVLKNLP

Sequences:

>Translated_179_residues
MGLSQAILTCLIDAPHSGYDLSKVFSESVGYFWQASQQQIYRELGKLESAGLIVSEVIPREGRLDKKVYSITEQGKQQLI
EWMHKPSEPDVIREDLLVKIFSGGLVPVSLLIEDVTRHRRIHLEKLLTYGEIEKEKFPYPKELNKEEKLRTLVLKAGIKY
EQAWIEWCDDALEVLKNLP
>Mature_178_residues
GLSQAILTCLIDAPHSGYDLSKVFSESVGYFWQASQQQIYRELGKLESAGLIVSEVIPREGRLDKKVYSITEQGKQQLIE
WMHKPSEPDVIREDLLVKIFSGGLVPVSLLIEDVTRHRRIHLEKLLTYGEIEKEKFPYPKELNKEEKLRTLVLKAGIKYE
QAWIEWCDDALEVLKNLP

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 20638; Mature: 20507

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSQAILTCLIDAPHSGYDLSKVFSESVGYFWQASQQQIYRELGKLESAGLIVSEVIPR
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
EGRLDKKVYSITEQGKQQLIEWMHKPSEPDVIREDLLVKIFSGGLVPVSLLIEDVTRHRR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IHLEKLLTYGEIEKEKFPYPKELNKEEKLRTLVLKAGIKYEQAWIEWCDDALEVLKNLP
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLSQAILTCLIDAPHSGYDLSKVFSESVGYFWQASQQQIYRELGKLESAGLIVSEVIPR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
EGRLDKKVYSITEQGKQQLIEWMHKPSEPDVIREDLLVKIFSGGLVPVSLLIEDVTRHRR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IHLEKLLTYGEIEKEKFPYPKELNKEEKLRTLVLKAGIKYEQAWIEWCDDALEVLKNLP
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]