| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232437
Identifier: 17232437
GI number: 17232437
Start: 5899337
End: 5900287
Strand: Reverse
Name: 17232437
Synonym: all4945
Alternate gene names: NA
Gene position: 5900287-5899337 (Counterclockwise)
Preceding gene: 17232438
Following gene: 17232433
Centisome position: 91.99
GC content: 38.07
Gene sequence:
>951_bases ATGACTAGGTTTCCCTACGACCAATTCGCCAAAGATTATCTTAAAGAATTATTACAGCCATTGGGAGATGTAGAAACAAG TCGCAAAGTACCTACAGAAATACGAGAGATTGATGTTTACTTTGCACCTTCACCCCCATCAAGCAATAGTACAATACAAA TAGGGCTGTTAGGAAAAATCGCCTCTGAGCCTGCACTAATTGAACCATTCAGAAATGCAGCTACAATTGCAGAAATTCGT AGTTGTATGAACAAATTATTTGACATCTTTGCTGAAATTAAGCGTCAGGCTAAAGGTGAAAAAAACCGCACTGCCGAATC AGAATTACCGCGCTTATGGATTTTGTCACCCACAGCCTCTGAATCTATACTAGACGGCTTTAGAACTAGCATAGATGAGG AAAAATGGGGTAAGGGTATACATTTTTTAGGTGAATATTTACGAACGGCTATTGTGGCTATTCATCAATTACCTTGTACA GAAGATACATTGTGGTTGAGAATTTTAGGAAAAGGAAAAGTTCAAAAACAAGCAATAGAGGAATTAGAAGCGCTTCCCTA CACAAACCCCATACGTTCCAAAGCAATTGATTTATTATTGAGTTTAAAGACCACCTTAGAAGTAAGTCAAAATCTAGACG AAGAGGATAGAGATTTAATTATGCGCTTATCACCTATTTATGAGCAGAAATTAGCAGAAGCTAAACAACAAGGTCTTCAG GAAGGCCTTCAAGAAGGACTTCAGGAAGGTCTTCAGGAAGGTCTTCAAGAAGGAATCCAAGCCGAACGTCGTCAAGTTAT AGAGAATGTATTGCAAGTTCGATTTGGCTCTTTAGATGCAGAATTAAGCGCAGTTATTGAACCTCTATTGAAATTAACTC CTGAACAATTCACTCCTATATTACTGCAACTATCGAGGGAAGAACTATTAAATAGGTTCCTCAATTCCTAA
Upstream 100 bases:
>100_bases CAGAAACTCATGATTAGGCTGGGCTGAAGAGCTATGAGATGCGATCGCTGGTACAGGCTCACACTCATATAAAATATCAC TATCATCCTACAATCAGTCC
Downstream 100 bases:
>100_bases TGTTAGGAAACACCAAAAAATAAAAACTCCATCCCCTTATGGGTGGAGTTTTGTCAGTAGTCAGTCATTAGGGTGCGTCA GTGTAAGAAAACCTAACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTRFPYDQFAKDYLKELLQPLGDVETSRKVPTEIREIDVYFAPSPPSSNSTIQIGLLGKIASEPALIEPFRNAATIAEIR SCMNKLFDIFAEIKRQAKGEKNRTAESELPRLWILSPTASESILDGFRTSIDEEKWGKGIHFLGEYLRTAIVAIHQLPCT EDTLWLRILGKGKVQKQAIEELEALPYTNPIRSKAIDLLLSLKTTLEVSQNLDEEDRDLIMRLSPIYEQKLAEAKQQGLQ EGLQEGLQEGLQEGLQEGIQAERRQVIENVLQVRFGSLDAELSAVIEPLLKLTPEQFTPILLQLSREELLNRFLNS
Sequences:
>Translated_316_residues MTRFPYDQFAKDYLKELLQPLGDVETSRKVPTEIREIDVYFAPSPPSSNSTIQIGLLGKIASEPALIEPFRNAATIAEIR SCMNKLFDIFAEIKRQAKGEKNRTAESELPRLWILSPTASESILDGFRTSIDEEKWGKGIHFLGEYLRTAIVAIHQLPCT EDTLWLRILGKGKVQKQAIEELEALPYTNPIRSKAIDLLLSLKTTLEVSQNLDEEDRDLIMRLSPIYEQKLAEAKQQGLQ EGLQEGLQEGLQEGLQEGIQAERRQVIENVLQVRFGSLDAELSAVIEPLLKLTPEQFTPILLQLSREELLNRFLNS >Mature_315_residues TRFPYDQFAKDYLKELLQPLGDVETSRKVPTEIREIDVYFAPSPPSSNSTIQIGLLGKIASEPALIEPFRNAATIAEIRS CMNKLFDIFAEIKRQAKGEKNRTAESELPRLWILSPTASESILDGFRTSIDEEKWGKGIHFLGEYLRTAIVAIHQLPCTE DTLWLRILGKGKVQKQAIEELEALPYTNPIRSKAIDLLLSLKTTLEVSQNLDEEDRDLIMRLSPIYEQKLAEAKQQGLQE GLQEGLQEGLQEGLQEGIQAERRQVIENVLQVRFGSLDAELSAVIEPLLKLTPEQFTPILLQLSREELLNRFLNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35798; Mature: 35666
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFPYDQFAKDYLKELLQPLGDVETSRKVPTEIREIDVYFAPSPPSSNSTIQIGLLGKI CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCEEEEEEHHHH ASEPALIEPFRNAATIAEIRSCMNKLFDIFAEIKRQAKGEKNRTAESELPRLWILSPTAS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCH ESILDGFRTSIDEEKWGKGIHFLGEYLRTAIVAIHQLPCTEDTLWLRILGKGKVQKQAIE HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHH ELEALPYTNPIRSKAIDLLLSLKTTLEVSQNLDEEDRDLIMRLSPIYEQKLAEAKQQGLQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLQEGLQEGLQEGLQEGIQAERRQVIENVLQVRFGSLDAELSAVIEPLLKLTPEQFTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH LLQLSREELLNRFLNS HHHHHHHHHHHHHHCC >Mature Secondary Structure TRFPYDQFAKDYLKELLQPLGDVETSRKVPTEIREIDVYFAPSPPSSNSTIQIGLLGKI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCEEEEEEHHHH ASEPALIEPFRNAATIAEIRSCMNKLFDIFAEIKRQAKGEKNRTAESELPRLWILSPTAS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCH ESILDGFRTSIDEEKWGKGIHFLGEYLRTAIVAIHQLPCTEDTLWLRILGKGKVQKQAIE HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHH ELEALPYTNPIRSKAIDLLLSLKTTLEVSQNLDEEDRDLIMRLSPIYEQKLAEAKQQGLQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLQEGLQEGLQEGLQEGIQAERRQVIENVLQVRFGSLDAELSAVIEPLLKLTPEQFTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH LLQLSREELLNRFLNS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA