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The map label for this gene is 17232386

Identifier: 17232386

GI number: 17232386

Start: 5833876

End: 5834301

Strand: Reverse

Name: 17232386

Synonym: all4894

Alternate gene names: NA

Gene position: 5834301-5833876 (Counterclockwise)

Preceding gene: 17232387

Following gene: 17232384

Centisome position: 90.97

GC content: 42.25

Gene sequence:

>426_bases
ATGTACAGAAACTTATCAAAACCCATGGCTGACATTGTTGACACTGCTGTAAATGCTGGTTCCTTTAACACTTTAGTTGC
TGCGGTTAAGGCTGCTGGGCTAGTAGATACACTCAAAGGTGTTGGTCCATTCACAGTTTTTGCTCCTACCGATGAAGCAT
TTGCTAAACTACCACAAGGTACCGTAGATGCTTTGCTAAAAGACATTCCCAAGCTTAAGAAAATCCTGACTTATCATGTT
GTTTCGGGTAAAGTCCTAGCAGCTGATGTAGTTAAGCTGAAGTCAGCCACTACTGTACAGGGTTCAGATGTAAAAATCGA
CGCATCTAATGGTGTCCAAATCAATGATGCTAAAGTTGCGACTCCCGATGTTGCTGCTGATAACGGTGTTATTCACGTAA
TTGATACGGTGTTGATTCCTGCGTAA

Upstream 100 bases:

>100_bases
AAGCTTGAGTAAGCTTCAAAATAGTTTTGGCTCACTCAAATTAAGTACATCTCTAAAGATAGATACAATTCTTCATGAAA
AAGTTTACTTTTGTATCTAG

Downstream 100 bases:

>100_bases
GCAAGGGTTTGCATAAATAACACACACATTTTTGGGGCAGCGATTAACTACGGTCGCTGCCCCATCAATTTATAATTAAT
GTTTAAAATCTTTGCCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYRNLSKPMADIVDTAVNAGSFNTLVAAVKAAGLVDTLKGVGPFTVFAPTDEAFAKLPQGTVDALLKDIPKLKKILTYHV
VSGKVLAADVVKLKSATTVQGSDVKIDASNGVQINDAKVATPDVAADNGVIHVIDTVLIPA

Sequences:

>Translated_141_residues
MYRNLSKPMADIVDTAVNAGSFNTLVAAVKAAGLVDTLKGVGPFTVFAPTDEAFAKLPQGTVDALLKDIPKLKKILTYHV
VSGKVLAADVVKLKSATTVQGSDVKIDASNGVQINDAKVATPDVAADNGVIHVIDTVLIPA
>Mature_141_residues
MYRNLSKPMADIVDTAVNAGSFNTLVAAVKAAGLVDTLKGVGPFTVFAPTDEAFAKLPQGTVDALLKDIPKLKKILTYHV
VSGKVLAADVVKLKSATTVQGSDVKIDASNGVQINDAKVATPDVAADNGVIHVIDTVLIPA

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=146, Percent_Identity=43.1506849315069, Blast_Score=100, Evalue=4e-22,
Organism=Homo sapiens, GI209862911, Length=134, Percent_Identity=30.5970149253731, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI209863011, Length=134, Percent_Identity=30.5970149253731, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI209863034, Length=134, Percent_Identity=30.5970149253731, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI209862907, Length=134, Percent_Identity=30.5970149253731, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI61743980, Length=113, Percent_Identity=39.8230088495575, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574452, Length=138, Percent_Identity=31.1594202898551, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 14581; Mature: 14581

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNLSKPMADIVDTAVNAGSFNTLVAAVKAAGLVDTLKGVGPFTVFAPTDEAFAKLPQG
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC
TVDALLKDIPKLKKILTYHVVSGKVLAADVVKLKSATTVQGSDVKIDASNGVQINDAKVA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCEEEECCCCEEECCCEEC
TPDVAADNGVIHVIDTVLIPA
CCCCCCCCCEEEEEEEHHCCC
>Mature Secondary Structure
MYRNLSKPMADIVDTAVNAGSFNTLVAAVKAAGLVDTLKGVGPFTVFAPTDEAFAKLPQG
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC
TVDALLKDIPKLKKILTYHVVSGKVLAADVVKLKSATTVQGSDVKIDASNGVQINDAKVA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCEEEECCCCEEECCCEEC
TPDVAADNGVIHVIDTVLIPA
CCCCCCCCCEEEEEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]