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The map label for this gene is yciC [H]

Identifier: 17232214

GI number: 17232214

Start: 5628088

End: 5629149

Strand: Reverse

Name: yciC [H]

Synonym: all4722

Alternate gene names: 17232214

Gene position: 5629149-5628088 (Counterclockwise)

Preceding gene: 17232215

Following gene: 17232213

Centisome position: 87.77

GC content: 36.53

Gene sequence:

>1062_bases
ATGAATACCCTAACCGCAGAAACAACAAACATAATTCCTGAAATTCCCAAACGAGGAATGCCAGTTACAATCATTACTGG
CTTTTTAGGCAGTGGTAAAACAACTCTACTCAATCAAATTCTTAAAAATAAGCATGATTTAAAAGTTGCTGTTCTCGTCA
ATGAGTTCGGTGATATTAATATTGATAGCCAGTTGTTAGTGTCTGTAGACCAAGATATGCTCGAACTGAGTAATGGCTGT
ATATGCTGCACTATCAATGATGGTTTAGTTGATGCTGTTTATCGGGTTTTGGAACGAGAAGAACGCATCGATTATTTAGT
TATTGAAACTACCGGTGTTGCTGACCCATTGCCCATTATTTTAACGTTTTTAGGTACAGAGCTTCGGGATTTGACCAATC
TCGACTCAATCCTGACAGTCGTAGATGCGGAAGCCTTTGAACCAAATCATTTCGAGAGTGAAGCTGCTTTAAAACAACTT
ACTTATGCAGACATTATTCTTCTGAATAAAACAGACTTGGCTACTTCAGAAAAAATTCAAGCATTAGAAGACTATATCCA
AACTGTCAAAGATAGTGCAAGAATCCTACATACAAAATATGGTGAAGTGGCTTTACCCTTAATTTTAGGTGTTGGTTTAA
CCCCAAAAGATGATTATACTGCTGATGATGCAGAAGATGCTCACGAACATAATCATGAACATCATAGCCATGAACACGAC
CATGACCATGACCATCATGAGCATAAACATCATCATGAACACCACTCTCATCATTTAGACAATGATGGATTTGTTTCAGT
ATCTTTTCAGTCTGATAGGCCGTTTGATGTTCATAAATTTGAGAATTTTCTCACAGAAGAAATGCCTCAGAATGTTTTCC
GTGCTAAGGGTATTTTGTGGTTTAGTGATAGTGAGTTACGCCATATATTTCAACTGAGTGGGCCTCGTTATAACTTACAC
GCTGATGAATGGCATACTTTACCTAAGAACCAATTGGTTTTCATTGGTAGAAAATTAAATACTAATCAAATTTATACACA
ACTTAACAATTGTTTGGTATGA

Upstream 100 bases:

>100_bases
CAAAATCCTTAAGCAGATTGCTGAAGTTGAATATACGTACATAGCCACAATTATTCAACAGCGTCATTGATTTCATAGTT
CACAAACATCTCATCACCCT

Downstream 100 bases:

>100_bases
TTAAGAAGTGTTAAGTAATCAAACAATTCAGTTAATAGATTTTTGCCAATCTCTAACTATTAACTAACTCACAATCTCTA
CCAACTAAACGAAATAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNTLTAETTNIIPEIPKRGMPVTIITGFLGSGKTTLLNQILKNKHDLKVAVLVNEFGDINIDSQLLVSVDQDMLELSNGC
ICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPIILTFLGTELRDLTNLDSILTVVDAEAFEPNHFESEAALKQL
TYADIILLNKTDLATSEKIQALEDYIQTVKDSARILHTKYGEVALPLILGVGLTPKDDYTADDAEDAHEHNHEHHSHEHD
HDHDHHEHKHHHEHHSHHLDNDGFVSVSFQSDRPFDVHKFENFLTEEMPQNVFRAKGILWFSDSELRHIFQLSGPRYNLH
ADEWHTLPKNQLVFIGRKLNTNQIYTQLNNCLV

Sequences:

>Translated_353_residues
MNTLTAETTNIIPEIPKRGMPVTIITGFLGSGKTTLLNQILKNKHDLKVAVLVNEFGDINIDSQLLVSVDQDMLELSNGC
ICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPIILTFLGTELRDLTNLDSILTVVDAEAFEPNHFESEAALKQL
TYADIILLNKTDLATSEKIQALEDYIQTVKDSARILHTKYGEVALPLILGVGLTPKDDYTADDAEDAHEHNHEHHSHEHD
HDHDHHEHKHHHEHHSHHLDNDGFVSVSFQSDRPFDVHKFENFLTEEMPQNVFRAKGILWFSDSELRHIFQLSGPRYNLH
ADEWHTLPKNQLVFIGRKLNTNQIYTQLNNCLV
>Mature_353_residues
MNTLTAETTNIIPEIPKRGMPVTIITGFLGSGKTTLLNQILKNKHDLKVAVLVNEFGDINIDSQLLVSVDQDMLELSNGC
ICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPIILTFLGTELRDLTNLDSILTVVDAEAFEPNHFESEAALKQL
TYADIILLNKTDLATSEKIQALEDYIQTVKDSARILHTKYGEVALPLILGVGLTPKDDYTADDAEDAHEHNHEHHSHEHD
HDHDHHEHKHHHEHHSHHLDNDGFVSVSFQSDRPFDVHKFENFLTEEMPQNVFRAKGILWFSDSELRHIFQLSGPRYNLH
ADEWHTLPKNQLVFIGRKLNTNQIYTQLNNCLV

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=359, Percent_Identity=30.9192200557103, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI33469141, Length=359, Percent_Identity=30.9192200557103, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI148727351, Length=359, Percent_Identity=30.9192200557103, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI223941779, Length=193, Percent_Identity=39.3782383419689, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI146231952, Length=359, Percent_Identity=30.6406685236769, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI223941776, Length=361, Percent_Identity=29.3628808864266, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI119120938, Length=131, Percent_Identity=41.9847328244275, Blast_Score=104, Evalue=1e-22,
Organism=Escherichia coli, GI87082430, Length=346, Percent_Identity=30.9248554913295, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1788499, Length=286, Percent_Identity=29.3706293706294, Blast_Score=104, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324356, Length=221, Percent_Identity=33.4841628959276, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40157; Mature: 40157

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLTAETTNIIPEIPKRGMPVTIITGFLGSGKTTLLNQILKNKHDLKVAVLVNEFGDIN
CCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCC
IDSQLLVSVDQDMLELSNGCICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPII
CCCHHEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
LTFLGTELRDLTNLDSILTVVDAEAFEPNHFESEAALKQLTYADIILLNKTDLATSEKIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHH
ALEDYIQTVKDSARILHTKYGEVALPLILGVGLTPKDDYTADDAEDAHEHNHEHHSHEHD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
HDHDHHEHKHHHEHHSHHLDNDGFVSVSFQSDRPFDVHKFENFLTEEMPQNVFRAKGILW
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE
FSDSELRHIFQLSGPRYNLHADEWHTLPKNQLVFIGRKLNTNQIYTQLNNCLV
ECCHHHHHHHHHCCCCEECCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure
MNTLTAETTNIIPEIPKRGMPVTIITGFLGSGKTTLLNQILKNKHDLKVAVLVNEFGDIN
CCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCC
IDSQLLVSVDQDMLELSNGCICCTINDGLVDAVYRVLEREERIDYLVIETTGVADPLPII
CCCHHEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
LTFLGTELRDLTNLDSILTVVDAEAFEPNHFESEAALKQLTYADIILLNKTDLATSEKIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHH
ALEDYIQTVKDSARILHTKYGEVALPLILGVGLTPKDDYTADDAEDAHEHNHEHHSHEHD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
HDHDHHEHKHHHEHHSHHLDNDGFVSVSFQSDRPFDVHKFENFLTEEMPQNVFRAKGILW
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE
FSDSELRHIFQLSGPRYNLHADEWHTLPKNQLVFIGRKLNTNQIYTQLNNCLV
ECCHHHHHHHHHCCCCEECCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]