| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232182
Identifier: 17232182
GI number: 17232182
Start: 5596323
End: 5596967
Strand: Reverse
Name: 17232182
Synonym: all4690
Alternate gene names: NA
Gene position: 5596967-5596323 (Counterclockwise)
Preceding gene: 17232186
Following gene: 17232181
Centisome position: 87.26
GC content: 43.26
Gene sequence:
>645_bases ATGTTGCTAAAACCAGATCAACGTTTGAAATTAGACGATACAGATGACAACTTATTTTATGCCTATCCCCGTTTTGTCAC TCATGTGGATGAAGGTTTTATTCAACGGTTGACTGATTTATATAGAGAACGATTACAGCCCAACACACGCATATTAGACA TGATGAGTAGTTGGGTGTCACATCTACCAGAAGAGATAAAATTTGCCCATGTGGAGGGACACGGACTCAACGCTGAGGAA CTAAAACGCAATCCCCGACTTAATCATTACTTTGTGCAGAACCTCAACGAAAATCCGGGTTTACCCTTGCCAGATCAAGA ATTTGATGCTGTTCTCAATTGTGTTTCCGTACAGTACCTACAATATCCAGAAGCAGTATTTTCCGAAATTCATCGCATCC TCAAACCTGGTGGTGTAGCAATCATCAGCTTTTCTAACAGAATGTTCTATCAAAAAGCAATCCAAGCTTGGCGCGATGCT TCCGAGCCAGGACGTTTAGAATTAGTGAAACGCTACTTCGCCTCAGTACCCGGATTTAGCACTCCAGAAATTATTGCTCG TAAGTCAACAGCACCCAATTTCTTGCAGTGGTTAGGTGCGCCAGGGGGAGATCCCTTTTATGCTGCGATCGCGCATCGAA AGTAG
Upstream 100 bases:
>100_bases TTTTTCAAATTGGTATGAGTTGATTTACCTTAACTTTATTAAAATATGTTAAGGAGAATTTCTCTCCAAGAAGAACTGAA AGTTTTCCATACAGGCATCT
Downstream 100 bases:
>100_bases CGTCAACATTGATCACCTATTCCCGAATTGGATCAAAAGATAAATTTTTGGGTATGAATTGACAGCAGCGCAGATAATTG CCTCAAAGCTCAAGCATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQRLTDLYRERLQPNTRILDMMSSWVSHLPEEIKFAHVEGHGLNAEE LKRNPRLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYLQYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDA SEPGRLELVKRYFASVPGFSTPEIIARKSTAPNFLQWLGAPGGDPFYAAIAHRK
Sequences:
>Translated_214_residues MLLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQRLTDLYRERLQPNTRILDMMSSWVSHLPEEIKFAHVEGHGLNAEE LKRNPRLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYLQYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDA SEPGRLELVKRYFASVPGFSTPEIIARKSTAPNFLQWLGAPGGDPFYAAIAHRK >Mature_214_residues MLLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQRLTDLYRERLQPNTRILDMMSSWVSHLPEEIKFAHVEGHGLNAEE LKRNPRLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYLQYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDA SEPGRLELVKRYFASVPGFSTPEIIARKSTAPNFLQWLGAPGGDPFYAAIAHRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24688; Mature: 24688
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQRLTDLYRERLQPNTRILDMMSSWVS CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HLPEEIKFAHVEGHGLNAEELKRNPRLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYL HCHHHHEEEEECCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDASEPGRLELVKRYFASVPGFS HCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC TPEIIARKSTAPNFLQWLGAPGGDPFYAAIAHRK CHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCCCC >Mature Secondary Structure MLLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQRLTDLYRERLQPNTRILDMMSSWVS CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HLPEEIKFAHVEGHGLNAEELKRNPRLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYL HCHHHHEEEEECCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDASEPGRLELVKRYFASVPGFS HCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC TPEIIARKSTAPNFLQWLGAPGGDPFYAAIAHRK CHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA