| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232181
Identifier: 17232181
GI number: 17232181
Start: 5595705
End: 5596214
Strand: Reverse
Name: 17232181
Synonym: all4689
Alternate gene names: NA
Gene position: 5596214-5595705 (Counterclockwise)
Preceding gene: 17232182
Following gene: 17232180
Centisome position: 87.25
GC content: 43.73
Gene sequence:
>510_bases ATGAACTTTCCTCGTTCCCGTAGAATTCTAGCAGCTGTATTGCTGTCTGTTTTGTTATTGACTACCGCCTGTACCCCTAA AGCACCAGGGCGATTTGACCAAGCACAGCAGGAAAGTAGCCGCCAAAAAACTGGCCAAGCGGTAGCTAAAACTGCAACTC AGGGTGAGAAATTTAACAAATTTTTCCCAAAAGAAGAAGCCGGATATCAACGGGTTTATACCCAGGAGAAAAAGGGCTTT GCTGAAGCCAAGTTGAAAAAAGATGGCAAAGATTTAGCAATGTTATCTATTTCAGATACTAGCAGTACACCTGGAGCCGC CGCGAAATTCTCTAATAGTACCAAGAACATCGGTGGATATCAGGCGGTGGAAGTAGGTAATACGCAAACAGCAGTTTTAG TCGGTAAATACCAGGTAAAAGTCCTGTCACGTTCTCCGTCATTTACTGCAAGCGATCGCGCCGACTGGATAGAAAAATTT AATCTCGATGGCTTGGCTAAACTCAAATAA
Upstream 100 bases:
>100_bases TTGATCACCTATTCCCGAATTGGATCAAAAGATAAATTTTTGGGTATGAATTGACAGCAGCGCAGATAATTGCCTCAAAG CTCAAGCATCAGGAGTAGAC
Downstream 100 bases:
>100_bases GTACCGTTTCTCTGCGTTTAAGACTCAACCCTGAATTCGCTACCATTCGACCCAAAACAGATAATAAAACCTCATAATTA GGAGATTGTTGTGAGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNFPRSRRILAAVLLSVLLLTTACTPKAPGRFDQAQQESSRQKTGQAVAKTATQGEKFNKFFPKEEAGYQRVYTQEKKGF AEAKLKKDGKDLAMLSISDTSSTPGAAAKFSNSTKNIGGYQAVEVGNTQTAVLVGKYQVKVLSRSPSFTASDRADWIEKF NLDGLAKLK
Sequences:
>Translated_169_residues MNFPRSRRILAAVLLSVLLLTTACTPKAPGRFDQAQQESSRQKTGQAVAKTATQGEKFNKFFPKEEAGYQRVYTQEKKGF AEAKLKKDGKDLAMLSISDTSSTPGAAAKFSNSTKNIGGYQAVEVGNTQTAVLVGKYQVKVLSRSPSFTASDRADWIEKF NLDGLAKLK >Mature_169_residues MNFPRSRRILAAVLLSVLLLTTACTPKAPGRFDQAQQESSRQKTGQAVAKTATQGEKFNKFFPKEEAGYQRVYTQEKKGF AEAKLKKDGKDLAMLSISDTSSTPGAAAKFSNSTKNIGGYQAVEVGNTQTAVLVGKYQVKVLSRSPSFTASDRADWIEKF NLDGLAKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18415; Mature: 18415
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPRSRRILAAVLLSVLLLTTACTPKAPGRFDQAQQESSRQKTGQAVAKTATQGEKFNK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH FFPKEEAGYQRVYTQEKKGFAEAKLKKDGKDLAMLSISDTSSTPGAAAKFSNSTKNIGGY CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCE QAVEVGNTQTAVLVGKYQVKVLSRSPSFTASDRADWIEKFNLDGLAKLK EEEEECCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNFPRSRRILAAVLLSVLLLTTACTPKAPGRFDQAQQESSRQKTGQAVAKTATQGEKFNK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH FFPKEEAGYQRVYTQEKKGFAEAKLKKDGKDLAMLSISDTSSTPGAAAKFSNSTKNIGGY CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCE QAVEVGNTQTAVLVGKYQVKVLSRSPSFTASDRADWIEKFNLDGLAKLK EEEEECCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA