Click here to switch to the map view.

The map label for this gene is 17232180

Identifier: 17232180

GI number: 17232180

Start: 5594727

End: 5595614

Strand: Reverse

Name: 17232180

Synonym: all4688

Alternate gene names: NA

Gene position: 5595614-5594727 (Counterclockwise)

Preceding gene: 17232181

Following gene: 17232179

Centisome position: 87.24

GC content: 40.2

Gene sequence:

>888_bases
GTGAGCAAACCCATTTTCGAGTTGGTTGATCAACTACCAACTAGTGGTTTAACTGTATCTATGCTAAACGCCTTAGATTT
TGTTGCTCCTGGTGAGTGGCAAAATACGGTTGGCTTCGTTAATACCATTAAGACTGTCACTGGTGAAACTGATGAAAGCT
TGATTCAGCAAATTGGTGAACGGGCAATTTATCTCTTCAATGATCGCTCCCAAGGATATCAAACAGCATTGTGGCTCTAT
CAAACTGTTGATAATACAGATAAAGCCTTAGGTGCAGCTGCTTTAGCTAACAAGGTCGGTGAAAAGTTACCCCTGTTGGG
TTTTCTCAACTCAGTTACACCCAAACCCGACAAAGCTCAAACTATAGACTTATGCCTGAAATTAGTGGCTGAACTAGTGG
CTTTCTGCCAAATCAACGGTATTCCTGGGGACAGTATCGGCGATTTCGTTGGCTCACTTGGTGAGTATAGTGGTGAGTCG
CTGATTCGCATGGTAGCTTTAGTTTGTGTTGATGGTTTAATACCTTTAGGCCCAGATTTTATTAGTAAGGCTATATCTGC
TTTAAGTCAAACTAATCCTCAAGAATTAGAGAAAAATTCCACTTTTCAAGGTATTAAAGACGTGATTCCTGGTGGAAATG
CTGGCAGTAAACTCAACTTTATGGGAGAAAGTTTTGATTCGGTAAAAGGTTGGATGAATGGTCTAGTTAGTAGTAACAAT
TTAAGCCCACAAAAAGTAGTTCACAACTTGAGTCACTTTGTAGAAATCGCTGATGACAAACTAGATTATTTGGCTGCTTT
CTTAGATGTAGCTACTAATTACTACGAACACACAGGAACACAAACCTTGGCAAGACGATTGATTGAAAGAGCCGTAGCGG
AGATTTAA

Upstream 100 bases:

>100_bases
ACTCAAATAAGTACCGTTTCTCTGCGTTTAAGACTCAACCCTGAATTCGCTACCATTCGACCCAAAACAGATAATAAAAC
CTCATAATTAGGAGATTGTT

Downstream 100 bases:

>100_bases
GCTAAGAGATAGTAGCAAAATTTCTACCTTTGCTATAAGAATCAGATTTAATTTCTGTTGGCGTAGCCTGCACTTGTGCA
TAAAATTCTTCAGTATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSKPIFELVDQLPTSGLTVSMLNALDFVAPGEWQNTVGFVNTIKTVTGETDESLIQQIGERAIYLFNDRSQGYQTALWLY
QTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLCLKLVAELVAFCQINGIPGDSIGDFVGSLGEYSGES
LIRMVALVCVDGLIPLGPDFISKAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFMGESFDSVKGWMNGLVSSNN
LSPQKVVHNLSHFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI

Sequences:

>Translated_295_residues
MSKPIFELVDQLPTSGLTVSMLNALDFVAPGEWQNTVGFVNTIKTVTGETDESLIQQIGERAIYLFNDRSQGYQTALWLY
QTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLCLKLVAELVAFCQINGIPGDSIGDFVGSLGEYSGES
LIRMVALVCVDGLIPLGPDFISKAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFMGESFDSVKGWMNGLVSSNN
LSPQKVVHNLSHFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI
>Mature_294_residues
SKPIFELVDQLPTSGLTVSMLNALDFVAPGEWQNTVGFVNTIKTVTGETDESLIQQIGERAIYLFNDRSQGYQTALWLYQ
TVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLCLKLVAELVAFCQINGIPGDSIGDFVGSLGEYSGESL
IRMVALVCVDGLIPLGPDFISKAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFMGESFDSVKGWMNGLVSSNNL
SPQKVVHNLSHFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31893; Mature: 31761

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPIFELVDQLPTSGLTVSMLNALDFVAPGEWQNTVGFVNTIKTVTGETDESLIQQIGE
CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
RAIYLFNDRSQGYQTALWLYQTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQ
HEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHH
TIDLCLKLVAELVAFCQINGIPGDSIGDFVGSLGEYSGESLIRMVALVCVDGLIPLGPDF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH
ISKAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFMGESFDSVKGWMNGLVSSNN
HHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCC
LSPQKVVHNLSHFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKPIFELVDQLPTSGLTVSMLNALDFVAPGEWQNTVGFVNTIKTVTGETDESLIQQIGE
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
RAIYLFNDRSQGYQTALWLYQTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQ
HEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHH
TIDLCLKLVAELVAFCQINGIPGDSIGDFVGSLGEYSGESLIRMVALVCVDGLIPLGPDF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH
ISKAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFMGESFDSVKGWMNGLVSSNN
HHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCC
LSPQKVVHNLSHFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA