| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232171
Identifier: 17232171
GI number: 17232171
Start: 5579894
End: 5580583
Strand: Reverse
Name: 17232171
Synonym: all4679
Alternate gene names: NA
Gene position: 5580583-5579894 (Counterclockwise)
Preceding gene: 17232172
Following gene: 17232169
Centisome position: 87.01
GC content: 42.17
Gene sequence:
>690_bases ATGTCTGTCACCGAAGAATTTGTTACCCCAGAAGATGTTATCTTTCCTCCAGGGGATTTATATAGTGACGAACCACCTTT GGAAAGTTATTTACATTTACAACAATTAATACTGTTATTAAAGTGTTTAGAGTGGTGGTGGCAAGACCGCAATGACTTTT TTGCCGCCGGGAACCTGACTATTTATTACAGTCCCACTCAGCGTAAGTCAGAATATTTTCGAGGCCCAGACTTTTTTGTG GTGCTGGGAACAGAACGCCGTCCCCGCAAAAGTTGGGTTGTCTGGCAAGAAGAAGGTAGATATCCTAACGTGATTGTGGA AATACTATCAGATTCTACCGCCACTACAGACAGAGGTTTAAAAAAGCAAATCTACCAAGACACATTCCGCACACCTGAGT ACTTCTGGTTTGATCCTGATACTTTGGAGTTTGCCGGCTTTGTGTTGATGGCTGGTAAATATCAACCAATTGAAGCAAAT CCCCAAGGTTGGCTATGGAGTCAGCAGTTAGAGTTATATTTAGGAGTGAATCAGCAAAATTTACGCTTTTACACGGACGA AGGAGAACTAGTCCCCACACCAGAAGAAACTGCACAACAAGAAAAACAACGCGCTGATCAAGAAAAAGAACGCAGCGATC GCTTAAGAGCGAAGCTGCGAGAATTAAACATAGATCCAGATACTATTTAA
Upstream 100 bases:
>100_bases TATCAAATTGCTCTTTCCATAGTCATAAATCCTGAATAGTTACGACTGCAATCTGTATTTATTGTTAGGCTAAACTTATA AGACTGAGACACTTGTTACT
Downstream 100 bases:
>100_bases CCCAAGTTGCTAGTTATCTAGATATAGTCTCTTTAGTTGGTAATTGTTAATTGGTAATTGAAAAGAGATTTTTACCCATT ACCCATTACCTATGAATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSVTEEFVTPEDVIFPPGDLYSDEPPLESYLHLQQLILLLKCLEWWWQDRNDFFAAGNLTIYYSPTQRKSEYFRGPDFFV VLGTERRPRKSWVVWQEEGRYPNVIVEILSDSTATTDRGLKKQIYQDTFRTPEYFWFDPDTLEFAGFVLMAGKYQPIEAN PQGWLWSQQLELYLGVNQQNLRFYTDEGELVPTPEETAQQEKQRADQEKERSDRLRAKLRELNIDPDTI
Sequences:
>Translated_229_residues MSVTEEFVTPEDVIFPPGDLYSDEPPLESYLHLQQLILLLKCLEWWWQDRNDFFAAGNLTIYYSPTQRKSEYFRGPDFFV VLGTERRPRKSWVVWQEEGRYPNVIVEILSDSTATTDRGLKKQIYQDTFRTPEYFWFDPDTLEFAGFVLMAGKYQPIEAN PQGWLWSQQLELYLGVNQQNLRFYTDEGELVPTPEETAQQEKQRADQEKERSDRLRAKLRELNIDPDTI >Mature_228_residues SVTEEFVTPEDVIFPPGDLYSDEPPLESYLHLQQLILLLKCLEWWWQDRNDFFAAGNLTIYYSPTQRKSEYFRGPDFFVV LGTERRPRKSWVVWQEEGRYPNVIVEILSDSTATTDRGLKKQIYQDTFRTPEYFWFDPDTLEFAGFVLMAGKYQPIEANP QGWLWSQQLELYLGVNQQNLRFYTDEGELVPTPEETAQQEKQRADQEKERSDRLRAKLRELNIDPDTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27136; Mature: 27004
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTEEFVTPEDVIFPPGDLYSDEPPLESYLHLQQLILLLKCLEWWWQDRNDFFAAGNLT CCCCCHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEE IYYSPTQRKSEYFRGPDFFVVLGTERRPRKSWVVWQEEGRYPNVIVEILSDSTATTDRGL EEECCCCCCHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHH KKQIYQDTFRTPEYFWFDPDTLEFAGFVLMAGKYQPIEANPQGWLWSQQLELYLGVNQQN HHHHHHHHCCCCCEEEECCCHHHHHCEEEECCCCCCCCCCCCCCEECCEEEEEECCCCCC LRFYTDEGELVPTPEETAQQEKQRADQEKERSDRLRAKLRELNIDPDTI CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SVTEEFVTPEDVIFPPGDLYSDEPPLESYLHLQQLILLLKCLEWWWQDRNDFFAAGNLT CCCCHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEE IYYSPTQRKSEYFRGPDFFVVLGTERRPRKSWVVWQEEGRYPNVIVEILSDSTATTDRGL EEECCCCCCHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHH KKQIYQDTFRTPEYFWFDPDTLEFAGFVLMAGKYQPIEANPQGWLWSQQLELYLGVNQQN HHHHHHHHCCCCCEEEECCCHHHHHCEEEECCCCCCCCCCCCCCEECCEEEEEECCCCCC LRFYTDEGELVPTPEETAQQEKQRADQEKERSDRLRAKLRELNIDPDTI CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA