| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yajQ [C]
Identifier: 17232154
GI number: 17232154
Start: 5562537
End: 5563028
Strand: Reverse
Name: yajQ [C]
Synonym: all4662
Alternate gene names: 17232154
Gene position: 5563028-5562537 (Counterclockwise)
Preceding gene: 17232155
Following gene: 17232151
Centisome position: 86.74
GC content: 40.24
Gene sequence:
>492_bases ATGGCTTCCACTTATTCCTTTGACATTGTGAGCGATTTTGATCGGCAAGAACTAGTTAACGCTGTTGATCAAGTCATCAG AGACCTGAAAAGTCGTTACGACCTCAAAGATACTCAGACAACTGTCGAGTTGGGTGAAGAAAAAATCACTATTGGTACGG ATAGCGAGTTTACCCTAGAGTCTGTTCACAACATTCTTCGGGAAAAAGCCGCCAAGCGTAATCTCTCACAAAAAATCTTT GATTTTGGCAAAGTAGAATCAGCCAGTGGTAATCGCGTCCGTCAAGAAATAACTCTCAAAAAAGGTATCAGTCAAGACAT CGCCAAGCAAATTTCTAAATTGATTCGGGACGAATTCAAAAAAGTCCAAGCTTCAATTCAAGGTGATGCTGTGCGAGTAT CTGCTAAAGCAAAAGATGATTTGCAAATTGTCATCCAACGCTTGAAACAAGAAGACTATCCAGTGGCTTTGCAGTTCACT AATTATCGTTAA
Upstream 100 bases:
>100_bases ATTCAAGCTCAAGGTTGATTAAGAACTGGGGACTGGGATTTTTCTCAATCCATGTTCTAACCTTAATCTAAAATCCAAAA TCGCAAGTTAGACATTCTTT
Downstream 100 bases:
>100_bases AAGGTAATTTCAAGACATGAAAAAGCGGGGATATCTGACGATACTTTCCCCGCTTATTTGTTAGTTGACAATTTTAAGTC AGCTAAAACAATGCTACGGA
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MASTYSFDIVSDFDRQELVNAVDQVIRDLKSRYDLKDTQTTVELGEEKITIGTDSEFTLESVHNILREKAAKRNLSQKIF DFGKVESASGNRVRQEITLKKGISQDIAKQISKLIRDEFKKVQASIQGDAVRVSAKAKDDLQIVIQRLKQEDYPVALQFT NYR
Sequences:
>Translated_163_residues MASTYSFDIVSDFDRQELVNAVDQVIRDLKSRYDLKDTQTTVELGEEKITIGTDSEFTLESVHNILREKAAKRNLSQKIF DFGKVESASGNRVRQEITLKKGISQDIAKQISKLIRDEFKKVQASIQGDAVRVSAKAKDDLQIVIQRLKQEDYPVALQFT NYR >Mature_162_residues ASTYSFDIVSDFDRQELVNAVDQVIRDLKSRYDLKDTQTTVELGEEKITIGTDSEFTLESVHNILREKAAKRNLSQKIFD FGKVESASGNRVRQEITLKKGISQDIAKQISKLIRDEFKKVQASIQGDAVRVSAKAKDDLQIVIQRLKQEDYPVALQFTN YR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=160, Percent_Identity=39.375, Blast_Score=103, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18615; Mature: 18484
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTYSFDIVSDFDRQELVNAVDQVIRDLKSRYDLKDTQTTVELGEEKITIGTDSEFTLE CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHH SVHNILREKAAKRNLSQKIFDFGKVESASGNRVRQEITLKKGISQDIAKQISKLIRDEFK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KVQASIQGDAVRVSAKAKDDLQIVIQRLKQEDYPVALQFTNYR HHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure ASTYSFDIVSDFDRQELVNAVDQVIRDLKSRYDLKDTQTTVELGEEKITIGTDSEFTLE CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHH SVHNILREKAAKRNLSQKIFDFGKVESASGNRVRQEITLKKGISQDIAKQISKLIRDEFK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KVQASIQGDAVRVSAKAKDDLQIVIQRLKQEDYPVALQFTNYR HHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA