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The map label for this gene is crt [H]

Identifier: 17231947

GI number: 17231947

Start: 5340190

End: 5340951

Strand: Direct

Name: crt [H]

Synonym: alr4455

Alternate gene names: 17231947

Gene position: 5340190-5340951 (Clockwise)

Preceding gene: 17231946

Following gene: 17231948

Centisome position: 83.26

GC content: 43.44

Gene sequence:

>762_bases
ATGACTTTGAATCAACCTGAATATTTCACCAAATACGAAAACCTGCACTTCCATCGAGATGAAAATGGCATTCTAGAAGT
GAGAATGCACACAAACGGTAGTTCACTTGTTTTCACAGGTAAAACTCATCGAGAGTTTCCCGACGCATTCTACGACATTA
GCCGAGACAGAGATAACCGTGTTGTCATCCTCACAGGTAGTGGTGATGCTTGGATGGCTGAAATCGATTTTCCTAGTTTA
GGAGATGTCACCAATCCTCGTGAGTGGGATAAAACTTATTGGGAAGGTAAAAAGGTGCTGCAAAACCTCTTGGATATTGA
AGTACCAGTTATCTCTGCTGTCAATGGTGCAGCATTACTTCATAGTGAATACATTCTGACGACCGACATTATTCTTGCGT
CTGAAAACACTGTATTTCAAGATATGCCTCATTTAAATGCAGGTATCGTACCAGGTGACGGAGTGCATATATTATGGCCG
TTGGCACTTGGTCTTTATCGCGGGCGCTACTTCTTGTTTACTCAAGAAAAGCTGACGGCTCAACAAGCTTATGAACTTAA
TGTTGTCCATGAAGTACTGCCGCAAAGCAAACTCATGGAACGGGCTTGGGAAATTGCCAGGACACTTGCCAAACAGCCCA
CATTAAACTTGCGATACACCCGTGTGGCCTTGACTCAAAGACTGAAGCGGTTAGTTAATGAAGGGATTGGCTATGGTCTA
GCATTAGAAGGTATTACCGCCACCGATCTCCGCAATACTTAA

Upstream 100 bases:

>100_bases
TAAAAATCATCTCAAACTTGATTTCAATCAAAGAAGTCTCTGTGACGAAAGCATAGATTTAGCTACGGAAATCTGACGCT
ATGCCAACACAGAACAAATC

Downstream 100 bases:

>100_bases
CATTTTTGATACTTGACAGGAAGAGGCAGGGGGGAGGTACTTCCCCTTTTCCCCCTGCTCCCTTTCTTCTTCTTGACAGG
TGAATTTAACAGTAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Crotonase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSL
GDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWP
LALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGL
ALEGITATDLRNT

Sequences:

>Translated_253_residues
MTLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSL
GDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWP
LALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGL
ALEGITATDLRNT
>Mature_252_residues
TLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLG
DVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPL
ALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGLA
LEGITATDLRNT

Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1787659, Length=238, Percent_Identity=26.0504201680672, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI221142681, Length=208, Percent_Identity=28.3653846153846, Blast_Score=71, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI25145438, Length=193, Percent_Identity=27.979274611399, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17554946, Length=198, Percent_Identity=28.7878787878788, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24654903, Length=200, Percent_Identity=26, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.55 [H]

Molecular weight: Translated: 28843; Mature: 28712

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNR
CCCCCCHHHHHHCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCCCE
VVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALL
EEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHH
HSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTA
HCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEEEHHHHHH
QQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCE
ALEGITATDLRNT
EECCCCCCCCCCC
>Mature Secondary Structure 
TLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNR
CCCCCHHHHHHCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCCCE
VVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALL
EEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHH
HSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTA
HCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEEEHHHHHH
QQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCE
ALEGITATDLRNT
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]