| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231905
Identifier: 17231905
GI number: 17231905
Start: 5289468
End: 5291696
Strand: Reverse
Name: 17231905
Synonym: all4413
Alternate gene names: NA
Gene position: 5291696-5289468 (Counterclockwise)
Preceding gene: 17231906
Following gene: 17231903
Centisome position: 82.51
GC content: 39.7
Gene sequence:
>2229_bases ATGGAGCAGTATGCAGGTTATGGGAGTTTGATTGAGGTGTTGAAGTCTGCGTCTGGTTTGTTGGGGTTGGAACGGACTTC TCGGTTACATCAGGATTTGGTGTCTATATGTGGTTATTTAGAGAATCCTAATTTTCGGATTGCGGTTTTTGGCCCTTTTA ATCATGGTAAGTCTACTTTGTTAAATGCGGTTTTGGGTAGTCGTGCTTTACCAATTGATTTGATTCCCACTACAGGGGCG GCTATTACGGTTAAGTATGGTTCTAGTGTGCGATCGCGTATCATGTTGGTAGACGGTACAGAAGTCTATCGCAGTGGTAC CGATGTTTTACAGCAGTTTGCTATTCTTGATGGTAATAGACAGATGCGCCGAGATGTGGCATCTGTAGAGGTTTTTTGTC CCCATCCGTTTTTAGAAACTGGTGTTGAGTTTGTTGATTTACCAGGAACTAATGATCGGGAGGAGCAAGATAATTTAGTT AAGGAGCAATTATTGAGTGCAGATTTGGTGGTGCAATTACTGGATGCGCGCAAGTTGATGACTTTGGGTGAACGGGAAAA TTTGCGTGATTGGTTATTGGATAGGGGTATTAAAACAGTTATTTTTGTTGCTAATTTTATTAATTTACTGGAGCCGGAGG AACAACAACAGGTACAAAGTCGGCTCAGGTTTGTTGCAGAAAGTTTCCGGGCTGAGTTACCAGCAGGATTCAGTAATTTG TATCGGGTTGATGCTTTACCTGCTTTACGCGCCAGGTTAAAAGGTGATGTGGCGGCGGCTAGTAGTAGCGGTTTAGCGGC GTTTGAAACAGCTTTGCAAAATGTTGTGGGTATCTTACAACAAAATCGGGGTAGTGTAAGGTTGCCAAGAGTGGAGGCGA TCGCATCCCAAATTCAATTATCATTAAAGCATAAAATTGACCCTATTGCTAATGAGTTTAATGCTTTTGATGAGAAATAC AATGCTAAAATTTCTATCAAACAAAAGGCTCAAGATTTAATTAGCAGAGGCTTTGCTGCTAGTATTTCTGAATTAAACGA TTGGCTATCTCTACCTAATTTACTTGCCAAATACCAAGCCAATGCTGCTGTTGCTTTGGCAGAAAATAATTTCAAATCTT GGCAAATAAACAATCTGAAAAAAGACTTGAATGAGTTACAAATATCTGTCGTGAAGTGGCTCTATCAAGCTTATGAATTT TTCCACGCAGAACGACCAGAAGATTTATTAATTCCTTTACCTAGTGAACCAATTATTACCCTACCTCCTAAGTCTGATCA TAGTGATACTTGGAGCGAACCAGGTTCAATTGCTGTCGGTGGTGGTATCGGTTGGCTATTAGGTGGGCCTGTTGGTGCGG CTGTGGTTGGTAGTGTTTCCTATTTACTCAACAAAAATGTACAACAGCAAGATGACCAATTGGCGAAGGAATCCTATCAT CAACAAGTTGCCAAACTTTGTATAGCTGCAACGGAAGAGTATTTTTCTCATCTTAGCCATCAAGGCTTATCAATCTTAGC TGAATACGAACGTCAAGCTGAAAAAGTAATTTGCTTTAAAGTTACTCAAGAACCACAAGAAATTACTAAAAAACGTGCAG AGTTACAACTATTACAACAGGGTTTTAATCAACTACTGGGTGAGTTAGCAAAAGTTAAAATTTCTTCTAACTATCAACCT TATGTAGAAACGCCACAAGTTACTCAAACTCAACAAAAATCTGGGCAAAAACAAGAACGCATATATACTCGCCCATCTAC AGCTACACCTAACCCACCACGACAGGAAAATACAGCCAAAACTACTGAGAAAAAAGTTGAACCGCCAAAGCAGCAAGTTT ATTCACCACCACCAAAAACTACTCCCTCACCTAATCCAGCCGAATTAGAAGCGAAGTTTCACAAATGGGAAATGGATGAG GAAATAGCACGGATGAAAGCAGAGATGCGTTCTCCTGGTTATCAGAATGGTAAGCAGCAACCAAATCAAAATACGCAAGC ACCTAAACCACCCCAAAGCCAAACAGAAAAAGATAAAATTGCTCATGCTTATAAGGTTTTAGGACTACCACAAGATGCAG CTTTTGCTGATATTAAACAGACTTATAAAACTTTAGTCAAAAAATGGCATCCAGATTTATTTGTAAATCAACCGCAGATG CAAAAACAAGCGCAAGAAAAAATGCGTTTGTTTAATGAAGCTTATACAGTATTGTCTGATCAAAAATAG
Upstream 100 bases:
>100_bases ACGCGGAGGGGCGCTGAGGTTGGCGCAGAGGGGCGCAGAGATGTAAGAGGAGAGGGGAGTTTTTTCTTCTCTCTTTGTTT TTATTGAGGAGAGGGGTTGT
Downstream 100 bases:
>100_bases GGGTGTAGGGGTTTAGAGGAAGAAAAAACCGGGATAAACCCGGTATTATTTTATGCTTGCACTCGAATCGTTAGCAAAAC TGTAGCTGTGAGTATTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MEQYAGYGSLIEVLKSASGLLGLERTSRLHQDLVSICGYLENPNFRIAVFGPFNHGKSTLLNAVLGSRALPIDLIPTTGA AITVKYGSSVRSRIMLVDGTEVYRSGTDVLQQFAILDGNRQMRRDVASVEVFCPHPFLETGVEFVDLPGTNDREEQDNLV KEQLLSADLVVQLLDARKLMTLGERENLRDWLLDRGIKTVIFVANFINLLEPEEQQQVQSRLRFVAESFRAELPAGFSNL YRVDALPALRARLKGDVAAASSSGLAAFETALQNVVGILQQNRGSVRLPRVEAIASQIQLSLKHKIDPIANEFNAFDEKY NAKISIKQKAQDLISRGFAASISELNDWLSLPNLLAKYQANAAVALAENNFKSWQINNLKKDLNELQISVVKWLYQAYEF FHAERPEDLLIPLPSEPIITLPPKSDHSDTWSEPGSIAVGGGIGWLLGGPVGAAVVGSVSYLLNKNVQQQDDQLAKESYH QQVAKLCIAATEEYFSHLSHQGLSILAEYERQAEKVICFKVTQEPQEITKKRAELQLLQQGFNQLLGELAKVKISSNYQP YVETPQVTQTQQKSGQKQERIYTRPSTATPNPPRQENTAKTTEKKVEPPKQQVYSPPPKTTPSPNPAELEAKFHKWEMDE EIARMKAEMRSPGYQNGKQQPNQNTQAPKPPQSQTEKDKIAHAYKVLGLPQDAAFADIKQTYKTLVKKWHPDLFVNQPQM QKQAQEKMRLFNEAYTVLSDQK
Sequences:
>Translated_742_residues MEQYAGYGSLIEVLKSASGLLGLERTSRLHQDLVSICGYLENPNFRIAVFGPFNHGKSTLLNAVLGSRALPIDLIPTTGA AITVKYGSSVRSRIMLVDGTEVYRSGTDVLQQFAILDGNRQMRRDVASVEVFCPHPFLETGVEFVDLPGTNDREEQDNLV KEQLLSADLVVQLLDARKLMTLGERENLRDWLLDRGIKTVIFVANFINLLEPEEQQQVQSRLRFVAESFRAELPAGFSNL YRVDALPALRARLKGDVAAASSSGLAAFETALQNVVGILQQNRGSVRLPRVEAIASQIQLSLKHKIDPIANEFNAFDEKY NAKISIKQKAQDLISRGFAASISELNDWLSLPNLLAKYQANAAVALAENNFKSWQINNLKKDLNELQISVVKWLYQAYEF FHAERPEDLLIPLPSEPIITLPPKSDHSDTWSEPGSIAVGGGIGWLLGGPVGAAVVGSVSYLLNKNVQQQDDQLAKESYH QQVAKLCIAATEEYFSHLSHQGLSILAEYERQAEKVICFKVTQEPQEITKKRAELQLLQQGFNQLLGELAKVKISSNYQP YVETPQVTQTQQKSGQKQERIYTRPSTATPNPPRQENTAKTTEKKVEPPKQQVYSPPPKTTPSPNPAELEAKFHKWEMDE EIARMKAEMRSPGYQNGKQQPNQNTQAPKPPQSQTEKDKIAHAYKVLGLPQDAAFADIKQTYKTLVKKWHPDLFVNQPQM QKQAQEKMRLFNEAYTVLSDQK >Mature_742_residues MEQYAGYGSLIEVLKSASGLLGLERTSRLHQDLVSICGYLENPNFRIAVFGPFNHGKSTLLNAVLGSRALPIDLIPTTGA AITVKYGSSVRSRIMLVDGTEVYRSGTDVLQQFAILDGNRQMRRDVASVEVFCPHPFLETGVEFVDLPGTNDREEQDNLV KEQLLSADLVVQLLDARKLMTLGERENLRDWLLDRGIKTVIFVANFINLLEPEEQQQVQSRLRFVAESFRAELPAGFSNL YRVDALPALRARLKGDVAAASSSGLAAFETALQNVVGILQQNRGSVRLPRVEAIASQIQLSLKHKIDPIANEFNAFDEKY NAKISIKQKAQDLISRGFAASISELNDWLSLPNLLAKYQANAAVALAENNFKSWQINNLKKDLNELQISVVKWLYQAYEF FHAERPEDLLIPLPSEPIITLPPKSDHSDTWSEPGSIAVGGGIGWLLGGPVGAAVVGSVSYLLNKNVQQQDDQLAKESYH QQVAKLCIAATEEYFSHLSHQGLSILAEYERQAEKVICFKVTQEPQEITKKRAELQLLQQGFNQLLGELAKVKISSNYQP YVETPQVTQTQQKSGQKQERIYTRPSTATPNPPRQENTAKTTEKKVEPPKQQVYSPPPKTTPSPNPAELEAKFHKWEMDE EIARMKAEMRSPGYQNGKQQPNQNTQAPKPPQSQTEKDKIAHAYKVLGLPQDAAFADIKQTYKTLVKKWHPDLFVNQPQM QKQAQEKMRLFNEAYTVLSDQK
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.genitalium MG148 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001401 [H]
Pfam domain/function: PF00350 Dynamin_N [H]
EC number: NA
Molecular weight: Translated: 83081; Mature: 83081
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQYAGYGSLIEVLKSASGLLGLERTSRLHQDLVSICGYLENPNFRIAVFGPFNHGKSTL CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH LNAVLGSRALPIDLIPTTGAAITVKYGSSVRSRIMLVDGTEVYRSGTDVLQQFAILDGNR HHHHHCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECHHHHHCHHHHHHHHHHHCCCH QMRRDVASVEVFCPHPFLETGVEFVDLPGTNDREEQDNLVKEQLLSADLVVQLLDARKLM HHHHHHHHEEEECCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGERENLRDWLLDRGIKTVIFVANFINLLEPEEQQQVQSRLRFVAESFRAELPAGFSNL HCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH YRVDALPALRARLKGDVAAASSSGLAAFETALQNVVGILQQNRGSVRLPRVEAIASQIQL HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH SLKHKIDPIANEFNAFDEKYNAKISIKQKAQDLISRGFAASISELNDWLSLPNLLAKYQA HHHHCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC NAAVALAENNFKSWQINNLKKDLNELQISVVKWLYQAYEFFHAERPEDLLIPLPSEPIIT CCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE LPPKSDHSDTWSEPGSIAVGGGIGWLLGGPVGAAVVGSVSYLLNKNVQQQDDQLAKESYH CCCCCCCCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QQVAKLCIAATEEYFSHLSHQGLSILAEYERQAEKVICFKVTQEPQEITKKRAELQLLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHH GFNQLLGELAKVKISSNYQPYVETPQVTQTQQKSGQKQERIYTRPSTATPNPPRQENTAK HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHEEECCCCCCCCCCCCCCCHH TTEKKVEPPKQQVYSPPPKTTPSPNPAELEAKFHKWEMDEEIARMKAEMRSPGYQNGKQQ HHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC PNQNTQAPKPPQSQTEKDKIAHAYKVLGLPQDAAFADIKQTYKTLVKKWHPDLFVNQPQM CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH QKQAQEKMRLFNEAYTVLSDQK HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEQYAGYGSLIEVLKSASGLLGLERTSRLHQDLVSICGYLENPNFRIAVFGPFNHGKSTL CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH LNAVLGSRALPIDLIPTTGAAITVKYGSSVRSRIMLVDGTEVYRSGTDVLQQFAILDGNR HHHHHCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECHHHHHCHHHHHHHHHHHCCCH QMRRDVASVEVFCPHPFLETGVEFVDLPGTNDREEQDNLVKEQLLSADLVVQLLDARKLM HHHHHHHHEEEECCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGERENLRDWLLDRGIKTVIFVANFINLLEPEEQQQVQSRLRFVAESFRAELPAGFSNL HCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH YRVDALPALRARLKGDVAAASSSGLAAFETALQNVVGILQQNRGSVRLPRVEAIASQIQL HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH SLKHKIDPIANEFNAFDEKYNAKISIKQKAQDLISRGFAASISELNDWLSLPNLLAKYQA HHHHCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC NAAVALAENNFKSWQINNLKKDLNELQISVVKWLYQAYEFFHAERPEDLLIPLPSEPIIT CCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE LPPKSDHSDTWSEPGSIAVGGGIGWLLGGPVGAAVVGSVSYLLNKNVQQQDDQLAKESYH CCCCCCCCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QQVAKLCIAATEEYFSHLSHQGLSILAEYERQAEKVICFKVTQEPQEITKKRAELQLLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHH GFNQLLGELAKVKISSNYQPYVETPQVTQTQQKSGQKQERIYTRPSTATPNPPRQENTAK HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHEEECCCCCCCCCCCCCCCHH TTEKKVEPPKQQVYSPPPKTTPSPNPAELEAKFHKWEMDEEIARMKAEMRSPGYQNGKQQ HHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC PNQNTQAPKPPQSQTEKDKIAHAYKVLGLPQDAAFADIKQTYKTLVKKWHPDLFVNQPQM CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH QKQAQEKMRLFNEAYTVLSDQK HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8920183 [H]