| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231865
Identifier: 17231865
GI number: 17231865
Start: 5237939
End: 5238394
Strand: Direct
Name: 17231865
Synonym: alr4373
Alternate gene names: NA
Gene position: 5237939-5238394 (Clockwise)
Preceding gene: 17231862
Following gene: 17231872
Centisome position: 81.67
GC content: 40.13
Gene sequence:
>456_bases GTGATGGTTATATTTGGCATCTTTGTATTTCCAGGTACTTCTGGTAGTGTTGCCCAAGTCGGTGCAAAAACAGTACCCAT AGAAGTAGATTTGGTTGTTCGCGGTTTAAATGTGCGCGATCCACAACAGTTAGCTGGCAATGGGTTGAAAACAGGCGGTA AAACTAAGGTTATTATCCGCAATCAACCTTATGGTGAGATTGAAATTAAGTCTGTGGAACAGTTACCAAGAACCGTAGTC GCTACTCAACCAGATGGTTCTGTGAAAGAATTACCAGATCCCAAAGCTAATAATTTTAGTACAGATATGCTTTTAACCTT AAACGGTAAAGCCCAAGTTACTAAGGACGGCCCTGTTTTAGGCAACAGTAAGGTAAAAATTGGTATGCCCTTTGAGTTGG AAGGCTTCAACTACAATTTCAATGCAACTGTCATTGATGTCAGATTACAAAGTTAG
Upstream 100 bases:
>100_bases CTCACATTGATTTGGAAAAATTTTTATGGCTATTTTAGATTCCAAAGGTCGCTTGTTTGGCAAAGTCAACATTCTGGATT TAGGGGCTTTGCTCGTTATT
Downstream 100 bases:
>100_bases GGATTGGGGACTGGGGATTGGGGACTGGGGACTAGGGATTGGGGACTAGGGATTGGGGACTGGGGATTGGGGACTGGGGA TTGGGGACTGGGGACTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKTGGKTKVIIRNQPYGEIEIKSVEQLPRTVV ATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVLGNSKVKIGMPFELEGFNYNFNATVIDVRLQS
Sequences:
>Translated_151_residues MMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKTGGKTKVIIRNQPYGEIEIKSVEQLPRTVV ATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVLGNSKVKIGMPFELEGFNYNFNATVIDVRLQS >Mature_151_residues MMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKTGGKTKVIIRNQPYGEIEIKSVEQLPRTVV ATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVLGNSKVKIGMPFELEGFNYNFNATVIDVRLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16228; Mature: 16228
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKTGGKTKVIIR CEEEEEEEEECCCCCCCEECCCEECCEEEEEEEECCCCCCHHHHHCCCCCCCCCEEEEEE NQPYGEIEIKSVEQLPRTVVATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVL CCCCCEEEEECHHCCCCEEEEECCCCCHHCCCCCCCCCCCCEEEEEECCCEEEECCCCEE GNSKVKIGMPFELEGFNYNFNATVIDVRLQS CCCEEEEECCEEECCCCCCCCEEEEEEEECC >Mature Secondary Structure MMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKTGGKTKVIIR CEEEEEEEEECCCCCCCEECCCEECCEEEEEEEECCCCCCHHHHHCCCCCCCCCEEEEEE NQPYGEIEIKSVEQLPRTVVATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVL CCCCCEEEEECHHCCCCEEEEECCCCCHHCCCCCCCCCCCCEEEEEECCCEEEECCCCEE GNSKVKIGMPFELEGFNYNFNATVIDVRLQS CCCEEEEECCEEECCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA