Click here to switch to the map view.

The map label for this gene is 17231842

Identifier: 17231842

GI number: 17231842

Start: 5213220

End: 5214524

Strand: Reverse

Name: 17231842

Synonym: all4350

Alternate gene names: NA

Gene position: 5214524-5213220 (Counterclockwise)

Preceding gene: 17231845

Following gene: 17231841

Centisome position: 81.3

GC content: 42.53

Gene sequence:

>1305_bases
ATGTTTGAAAAGCGAATATTCATCAAAAAAATTTTATGGAAGACTGATTTTCTCCTTCCTGGAATTCTATGGTTTCTTAG
CCGTATCCTCATTTGGATAACGATGTTGTTGGTTGCGCCTAATTTACCATCAGCACCAGAAAGTTTGCCTAGTTTAAGCT
GGGAGGTTTTTGATGCTTGGGATAGCGTGCATTATAGAGCGATCGCCACTACTGGATATCAATTTGTCGATGACGGTAAG
CAGCACAATCTAGCTTTCTTTCCCTTGTTTCCCTTGTGTATTCGGTTATTGATGAATTTGGGTTTGTCTTTTGAATTAGC
TGGCCTTTTAATCAACAATGTGACATTTTTGGCAGCACTTTATGTGTTGTACTTCTGGCTGAAAAATGCTTATGGAATCA
GTATCGCTAGATGGGCTACGGCTGTAGTGTCTTGTTATCCATCGGCGATGTTTACAGGAGTAATTTATACAGAGGGGCTA
TATCTTTTTTTAAGTACAGCCGCTTTACGGGCTTTTGATCAAAAGCAGTATGGCTGGACAGGATTCTGGGGTGCATTGGC
GACAGCAACACGTCCCACAGGGATGGCCATGATTCCTGCATTTGCGATCGCTGCTTGGAAAGAACGCAGACGAACAATTG
CTTATATCGCAGGTTTAGCCACCGCTATAGGAGTCACGGTCTTTAGTTTATATTGTGCTATCCGCTTCCACAATCCTCTA
GCCTTTATCGCTGCACAACGAGGCTGGCGGCCATCTCTCGGCTTTGATTGGCAAGGATGGTTAGGTATGCTAATGAAAAT
TGTCGTGGGGTCACAAAACTGGCAGTTTGGTTGGGTTAAGCCTACATCTGGTTTGATTAATGATCCTTGGCATCCTTTGT
TGTTTATCCTGTTTGTTGGTGGAGGATATTGTTTATACTTTTTTCGGCAATATTTAAACTCCTCCAAGGTCATTTATGGT
TGTTACAGCTTAGTGTTGTTTTGGTTACTACTGGCACCAGAAGATTTAATTAATCACTTACTGAATGTATTCATGGTCTT
TGGTGGTAGTTATGCGTTGTGGTGTTTCCGTGAAAAGCTAACTCCTGTAACTGTCATGTATGGCTTTTGCGGTATCGGAC
TGCTGCTTGCTTCTGGGGGAACAATATCCTTAAGCCGCCTAGCTTATGGTATTGTGCCTTTGAGTATAGCGATCGCCATG
CTGTTATCTCGCTATCCTCGTCAAGGGTATTTTGTTTTAGGTTTATTCATCACATTACTCGCCAGGTTAGCTGTAGGATT
TGCTCAAAAACAGTGGGTGGGGTAG

Upstream 100 bases:

>100_bases
TGAAAGCCAATCATAGCTATACTAAATTTTGTCCAATTTTCTGTTGTTTATTTCTATAAGAAAAAAATGCGTAAGGGATT
TTTGGGAAAGACTCAACTCT

Downstream 100 bases:

>100_bases
AAAAATTAGTGTTTTGTCTGTGCTAACTATCCTCTGCGTAGGCGATCGCTTCTTGTTATTTAGCCAGTTCCCTAAGTCAG
ATATAATAATCACAATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFEKRIFIKKILWKTDFLLPGILWFLSRILIWITMLLVAPNLPSAPESLPSLSWEVFDAWDSVHYRAIATTGYQFVDDGK
QHNLAFFPLFPLCIRLLMNLGLSFELAGLLINNVTFLAALYVLYFWLKNAYGISIARWATAVVSCYPSAMFTGVIYTEGL
YLFLSTAALRAFDQKQYGWTGFWGALATATRPTGMAMIPAFAIAAWKERRRTIAYIAGLATAIGVTVFSLYCAIRFHNPL
AFIAAQRGWRPSLGFDWQGWLGMLMKIVVGSQNWQFGWVKPTSGLINDPWHPLLFILFVGGGYCLYFFRQYLNSSKVIYG
CYSLVLFWLLLAPEDLINHLLNVFMVFGGSYALWCFREKLTPVTVMYGFCGIGLLLASGGTISLSRLAYGIVPLSIAIAM
LLSRYPRQGYFVLGLFITLLARLAVGFAQKQWVG

Sequences:

>Translated_434_residues
MFEKRIFIKKILWKTDFLLPGILWFLSRILIWITMLLVAPNLPSAPESLPSLSWEVFDAWDSVHYRAIATTGYQFVDDGK
QHNLAFFPLFPLCIRLLMNLGLSFELAGLLINNVTFLAALYVLYFWLKNAYGISIARWATAVVSCYPSAMFTGVIYTEGL
YLFLSTAALRAFDQKQYGWTGFWGALATATRPTGMAMIPAFAIAAWKERRRTIAYIAGLATAIGVTVFSLYCAIRFHNPL
AFIAAQRGWRPSLGFDWQGWLGMLMKIVVGSQNWQFGWVKPTSGLINDPWHPLLFILFVGGGYCLYFFRQYLNSSKVIYG
CYSLVLFWLLLAPEDLINHLLNVFMVFGGSYALWCFREKLTPVTVMYGFCGIGLLLASGGTISLSRLAYGIVPLSIAIAM
LLSRYPRQGYFVLGLFITLLARLAVGFAQKQWVG
>Mature_434_residues
MFEKRIFIKKILWKTDFLLPGILWFLSRILIWITMLLVAPNLPSAPESLPSLSWEVFDAWDSVHYRAIATTGYQFVDDGK
QHNLAFFPLFPLCIRLLMNLGLSFELAGLLINNVTFLAALYVLYFWLKNAYGISIARWATAVVSCYPSAMFTGVIYTEGL
YLFLSTAALRAFDQKQYGWTGFWGALATATRPTGMAMIPAFAIAAWKERRRTIAYIAGLATAIGVTVFSLYCAIRFHNPL
AFIAAQRGWRPSLGFDWQGWLGMLMKIVVGSQNWQFGWVKPTSGLINDPWHPLLFILFVGGGYCLYFFRQYLNSSKVIYG
CYSLVLFWLLLAPEDLINHLLNVFMVFGGSYALWCFREKLTPVTVMYGFCGIGLLLASGGTISLSRLAYGIVPLSIAIAM
LLSRYPRQGYFVLGLFITLLARLAVGFAQKQWVG

Specific function: Unknown

COG id: COG5542

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48944; Mature: 48944

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKRIFIKKILWKTDFLLPGILWFLSRILIWITMLLVAPNLPSAPESLPSLSWEVFDAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHH
DSVHYRAIATTGYQFVDDGKQHNLAFFPLFPLCIRLLMNLGLSFELAGLLINNVTFLAAL
HHHHEEEEEECCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YVLYFWLKNAYGISIARWATAVVSCYPSAMFTGVIYTEGLYLFLSTAALRAFDQKQYGWT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFWGALATATRPTGMAMIPAFAIAAWKERRRTIAYIAGLATAIGVTVFSLYCAIRFHNPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFIAAQRGWRPSLGFDWQGWLGMLMKIVVGSQNWQFGWVKPTSGLINDPWHPLLFILFVG
HEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHC
GGYCLYFFRQYLNSSKVIYGCYSLVLFWLLLAPEDLINHLLNVFMVFGGSYALWCFREKL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEHHCC
TPVTVMYGFCGIGLLLASGGTISLSRLAYGIVPLSIAIAMLLSRYPRQGYFVLGLFITLL
CHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
ARLAVGFAQKQWVG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MFEKRIFIKKILWKTDFLLPGILWFLSRILIWITMLLVAPNLPSAPESLPSLSWEVFDAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHH
DSVHYRAIATTGYQFVDDGKQHNLAFFPLFPLCIRLLMNLGLSFELAGLLINNVTFLAAL
HHHHEEEEEECCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YVLYFWLKNAYGISIARWATAVVSCYPSAMFTGVIYTEGLYLFLSTAALRAFDQKQYGWT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFWGALATATRPTGMAMIPAFAIAAWKERRRTIAYIAGLATAIGVTVFSLYCAIRFHNPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFIAAQRGWRPSLGFDWQGWLGMLMKIVVGSQNWQFGWVKPTSGLINDPWHPLLFILFVG
HEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHC
GGYCLYFFRQYLNSSKVIYGCYSLVLFWLLLAPEDLINHLLNVFMVFGGSYALWCFREKL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEHHCC
TPVTVMYGFCGIGLLLASGGTISLSRLAYGIVPLSIAIAMLLSRYPRQGYFVLGLFITLL
CHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
ARLAVGFAQKQWVG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA