| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231841
Identifier: 17231841
GI number: 17231841
Start: 5211894
End: 5213093
Strand: Reverse
Name: 17231841
Synonym: all4349
Alternate gene names: NA
Gene position: 5213093-5211894 (Counterclockwise)
Preceding gene: 17231842
Following gene: 17231840
Centisome position: 81.28
GC content: 31.17
Gene sequence:
>1200_bases ATGACACAATGGACAGGTAGGAAATCATTTAAATTCATAAAACATGACTTCAAAAGCTTGTTAATTTCTTTCCAACAACG ATTTCCACGATATTTAATCGTCTGTATTATATGTGCCGTAATAATTCGACTAATCTGTGTTCCTAATAAATCTGTTGATT ATAAATATTTTTTAGCGCCTTGGTATGATTTTATAGTTTCCAACGGCGGATTTAGCGCATTAAAATATAGTTTTGCTGAC TATACACCACCCTACCTCTACTGGATTTTAATAGCTGGTACCGTGCTTTCAGGATTACCGAAAATTCTGGCAATCAAGCT TTTCGCCATGTCTGTTGATTTTGTTTGTGCTTTTTTCACTTACAAAATAGTCAAACTTAAATATCCGGAAGGAAGGAAAG CAATTTTTGCCTTCATCACAGTCATTTTAAGTCCTGTCGTTATTTACAATAGTGCCTTGTGGGGTCAATGTGACAGCATA TATACAACAGGATTAATTGCCTGTATTTACTTTTTATCTATACAAAAACAACTTTCAGCGTTAGTGAGTTTTGGCATAGC ATTGTCTTTTAAATTGCAAGCAATGTTTCTTTCGCCTTTATTATTAATTTTTTTAATAAAAAACAGAATAAAATGGTACT ACTTACCAATACCTTTTTTAGTATATTTAATAGCAATTATGCCAGCCTGGGTCGCAGGAAGACCAATACAGGAATTATTG TTAATATATTTTAATCAAGCTAATAAATACAAAGAATTAGCTAAGAACGCACCTAATATTTATCAATGGATTCCGAATAA TTCTTATAATATTGTTGCTCCTCTAGGTGTAATAATAACTATATTTGCAATATTTTTATTAACTTACGTCGTATATAAAA GTAAACTAGAAATTACTCTAGACAGACTGATCCATTTAGCCACTACGATAGTTTTATTAGTTCCTTATATTCTCCCAAAA ATGCACGAGAGATATTTTTATCCTGCCGATATCTGTTCCATTATTTTTGCTTTTTATTTTCCCCATTATCGTTGGATAGC TATCTTAGTGCCAATGTCGTCATTTTTCAGCTATTTAGGAACACCTATATATATCAAATTATTTTCTATACCTTTAGCTT TTGTACTTTGGTTTGTTGTTAAAACTTGTGATTTAATTTATCCGAGATATCAAGCGAAGTTTTACTTGAATAATCAGTAA
Upstream 100 bases:
>100_bases CTATCCTCTGCGTAGGCGATCGCTTCTTGTTATTTAGCCAGTTCCCTAAGTCAGATATAATAATCACAATTTATGTGCTA CAGCACTGCATTTACCATCT
Downstream 100 bases:
>100_bases TTAAGTTTGAGTCAAGAATCAGTCAGGGAAAGTATCTCATATAATTGGGTTTTGTCTTTTAGCTGACTATTATGCTTGGG TTATATATGTTGATTTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTQWTGRKSFKFIKHDFKSLLISFQQRFPRYLIVCIICAVIIRLICVPNKSVDYKYFLAPWYDFIVSNGGFSALKYSFAD YTPPYLYWILIAGTVLSGLPKILAIKLFAMSVDFVCAFFTYKIVKLKYPEGRKAIFAFITVILSPVVIYNSALWGQCDSI YTTGLIACIYFLSIQKQLSALVSFGIALSFKLQAMFLSPLLLIFLIKNRIKWYYLPIPFLVYLIAIMPAWVAGRPIQELL LIYFNQANKYKELAKNAPNIYQWIPNNSYNIVAPLGVIITIFAIFLLTYVVYKSKLEITLDRLIHLATTIVLLVPYILPK MHERYFYPADICSIIFAFYFPHYRWIAILVPMSSFFSYLGTPIYIKLFSIPLAFVLWFVVKTCDLIYPRYQAKFYLNNQ
Sequences:
>Translated_399_residues MTQWTGRKSFKFIKHDFKSLLISFQQRFPRYLIVCIICAVIIRLICVPNKSVDYKYFLAPWYDFIVSNGGFSALKYSFAD YTPPYLYWILIAGTVLSGLPKILAIKLFAMSVDFVCAFFTYKIVKLKYPEGRKAIFAFITVILSPVVIYNSALWGQCDSI YTTGLIACIYFLSIQKQLSALVSFGIALSFKLQAMFLSPLLLIFLIKNRIKWYYLPIPFLVYLIAIMPAWVAGRPIQELL LIYFNQANKYKELAKNAPNIYQWIPNNSYNIVAPLGVIITIFAIFLLTYVVYKSKLEITLDRLIHLATTIVLLVPYILPK MHERYFYPADICSIIFAFYFPHYRWIAILVPMSSFFSYLGTPIYIKLFSIPLAFVLWFVVKTCDLIYPRYQAKFYLNNQ >Mature_398_residues TQWTGRKSFKFIKHDFKSLLISFQQRFPRYLIVCIICAVIIRLICVPNKSVDYKYFLAPWYDFIVSNGGFSALKYSFADY TPPYLYWILIAGTVLSGLPKILAIKLFAMSVDFVCAFFTYKIVKLKYPEGRKAIFAFITVILSPVVIYNSALWGQCDSIY TTGLIACIYFLSIQKQLSALVSFGIALSFKLQAMFLSPLLLIFLIKNRIKWYYLPIPFLVYLIAIMPAWVAGRPIQELLL IYFNQANKYKELAKNAPNIYQWIPNNSYNIVAPLGVIITIFAIFLLTYVVYKSKLEITLDRLIHLATTIVLLVPYILPKM HERYFYPADICSIIFAFYFPHYRWIAILVPMSSFFSYLGTPIYIKLFSIPLAFVLWFVVKTCDLIYPRYQAKFYLNNQ
Specific function: Unknown
COG id: COG5542
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46424; Mature: 46293
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQWTGRKSFKFIKHDFKSLLISFQQRFPRYLIVCIICAVIIRLICVPNKSVDYKYFLAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHH WYDFIVSNGGFSALKYSFADYTPPYLYWILIAGTVLSGLPKILAIKLFAMSVDFVCAFFT HHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH YKIVKLKYPEGRKAIFAFITVILSPVVIYNSALWGQCDSIYTTGLIACIYFLSIQKQLSA HHHHEEECCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LVSFGIALSFKLQAMFLSPLLLIFLIKNRIKWYYLPIPFLVYLIAIMPAWVAGRPIQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHH LIYFNQANKYKELAKNAPNIYQWIPNNSYNIVAPLGVIITIFAIFLLTYVVYKSKLEITL HHHHHCCHHHHHHHCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLIHLATTIVLLVPYILPKMHERYFYPADICSIIFAFYFPHYRWIAILVPMSSFFSYLG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC TPIYIKLFSIPLAFVLWFVVKTCDLIYPRYQAKFYLNNQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure TQWTGRKSFKFIKHDFKSLLISFQQRFPRYLIVCIICAVIIRLICVPNKSVDYKYFLAP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHH WYDFIVSNGGFSALKYSFADYTPPYLYWILIAGTVLSGLPKILAIKLFAMSVDFVCAFFT HHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH YKIVKLKYPEGRKAIFAFITVILSPVVIYNSALWGQCDSIYTTGLIACIYFLSIQKQLSA HHHHEEECCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LVSFGIALSFKLQAMFLSPLLLIFLIKNRIKWYYLPIPFLVYLIAIMPAWVAGRPIQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHH LIYFNQANKYKELAKNAPNIYQWIPNNSYNIVAPLGVIITIFAIFLLTYVVYKSKLEITL HHHHHCCHHHHHHHCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLIHLATTIVLLVPYILPKMHERYFYPADICSIIFAFYFPHYRWIAILVPMSSFFSYLG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC TPIYIKLFSIPLAFVLWFVVKTCDLIYPRYQAKFYLNNQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA