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The map label for this gene is clpS [H]

Identifier: 17231817

GI number: 17231817

Start: 5177362

End: 5177643

Strand: Reverse

Name: clpS [H]

Synonym: asl4325

Alternate gene names: 17231817

Gene position: 5177643-5177362 (Counterclockwise)

Preceding gene: 17231819

Following gene: 17231816

Centisome position: 80.73

GC content: 50.0

Gene sequence:

>282_bases
GTGTCAGTCGAAACCATTGAGAAGCGTTCCACATCCCGCAAGCTCGCGCCTCGGTATCGCGTTTTGCTCCATAACGACGA
CCACAACTCTATGGAGTACGTGGTGCAAGTACTAATCACCACCGTGCCGAGCCTAACCCAGCCTCAAGCTGTGAGCATCA
TGATGGAAGCCCATACTAATGGGCTAGCCTTAGTTATTACCTGCGCTCAAGAACACGCAGAATTTTACTGCGAAACCCTC
AAAGATCACGGTCTTAGCAGCACAATAGAACCCGATGAATAA

Upstream 100 bases:

>100_bases
AGAATTTTGATGAAAATGCTATAAAATGGGTAGATAACTGTATAGTGATCACTGTACAGAGCCTGTGTTGTAGTAACTCC
AAAAACCAAGAGCAAAAGCT

Downstream 100 bases:

>100_bases
ATCGGTAACCAGGTAAACTTCTCAGTTAGCTCAATTACCCAGGGGTTTTAGAGAAAGCAAATATCTCACCCCCATAATGA
ATATTGCCAACCGCGCAGTA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNGLALVITCAQEHAEFYCETL
KDHGLSSTIEPDE

Sequences:

>Translated_93_residues
MSVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNGLALVITCAQEHAEFYCETL
KDHGLSSTIEPDE
>Mature_92_residues
SVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNGLALVITCAQEHAEFYCETLK
DHGLSSTIEPDE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10471; Mature: 10340

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTN
CCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEECCCC
GLALVITCAQEHAEFYCETLKDHGLSSTIEPDE
CEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTN
CCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEECCCC
GLALVITCAQEHAEFYCETLKDHGLSSTIEPDE
CEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA