Click here to switch to the map view.

The map label for this gene is 17231796

Identifier: 17231796

GI number: 17231796

Start: 5158678

End: 5160072

Strand: Reverse

Name: 17231796

Synonym: all4304

Alternate gene names: NA

Gene position: 5160072-5158678 (Counterclockwise)

Preceding gene: 17231798

Following gene: 17231795

Centisome position: 80.45

GC content: 45.02

Gene sequence:

>1395_bases
ATGTTAGAAGGTTCAATTCTACAACAGCTAGAAGCGTCCCATCGCTACAGCACCAGACCAGTCCGATTCGGGGTGTATTA
CAAAAATACCCTGGTTGCGCTTTGTCATGCTTTAGAAGACCATATATTGGCGGATGAGAATTCACCTTTGGTAATTACTG
CCTTCCAACGGGGTAAGTGGTATTTGCAAGAGGCTGAAAGATATGCAGACATCGCTCAGTGCAGTCGCCAAATTGCTATT
ATGGCAGCACCGGATGCAGGCTTTGCTGAACATCCCACTAGCCAAATGCCGAATGTCGATTTAGTGGCTTTAGATCCATC
TGACCCAGTAGCTCAAGAATGGCATTTGATTATTTTGTCGCCTAAATACACGGCAATGGTACTTTGTCAAGAGTTGTCTG
ATGCTGATTATGGGGTAGGTGGCAGACCGGCTTCTGATGTCGAGCGTAAATTTTATGGCTTGTGGACTTTTGAGCCAGAA
CTAGTTAAAGAAACGGCAGAGTTAGCGATCGCTCATATTCAAAAATACAATCCAGAATTAGCAAAGAAACTCCTGATTCA
TGATCAGGAAATAGGAAGGGGTGCGATCGCATCAACAGACCTGACCACAGTTGTTTCCCGTGTTGTAGATTATCTGCAAA
TAGGACAAGAACAATTATCTATCCCCGCCGCCGTGCGTCATCAAGCCTTAGATAGTAACTTGGTTTCCAACGAAATCCAG
GCATTTCTGCGGATGGCGCAACTGATGGATTTGGCTGATATCACAAATCCACAAGCCGCTACAGAAGTAGCAGCCTTAGC
AGAAACCCTGGGACAGCTTTTGGATTTACCTGCATGGCAGATTAAAAGATTAAAACTAGCAGGATTGTTGCACCGCATAG
ATCCACTGCAAAAAGCAGAGAGTATTTTTACACCTGGAACTTCAACTCACCACCAAGAATCAGCCCCCAGTTGTCCTTTG
ACTTGCTCTTTAGTCCCAGGAGCGCAAGCATTACGCAAAATGTCAAGATTACGGGCAGTAGCTCAAATTATTACTCATCA
AACTGAGTGGTGGGATGGGACAGGGGAACCTGCGGGTTTAGCTGGTGACGAAATTCCTCTAGAGTCGAGAATTTTGGCGT
TAGTTGCAGACTTTCAGTGGCAAGTTAACCAAAAAAGAGCCGCTAGCAAAAATCGGCAAGAAATATTTGTGCAAGCCTTG
GAAGAATGCCGACAGCAAGCAAACCGCTTTGACCCTAAACTAATAGATGCCCTATTTTTATTAGTCATGGGTTTGCAACA
AGGACTCGACTTACCCCTAATGACACCAAAAGTCAGCATCGGTATGTGGCTACTTGATTCCCGATGGGATAGCCAGAGCA
AGACTAGTGAAGAGATGAGTAGTTACCCACAATGA

Upstream 100 bases:

>100_bases
GCAAAGCACAGTAAACTAAAGATTCAGCAGCATAAATTTATCACCTCTGGATTAAATCCTGTTTTCCCTAGCGCCTTGGC
GATTCATATAATCAAACCCC

Downstream 100 bases:

>100_bases
ATATTGACGCTATTAAACTAGGACAACTCAAACAACTGCCAGGGGCGAATTTAGAAGATGAGGAACTTTCTCAACTGGAT
TTAAGCCGCATTAATTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sensor Protein; Two-Component Sensor Histidine Kinase; Metal Dependent Phosphohydrolase; Sensory Transduction Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And; Sensor Histidine Kinase; Anti-Sigma-Factor Antagonist; Diguanylate Cyclase Domain Protein

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLEGSILQQLEASHRYSTRPVRFGVYYKNTLVALCHALEDHILADENSPLVITAFQRGKWYLQEAERYADIAQCSRQIAI
MAAPDAGFAEHPTSQMPNVDLVALDPSDPVAQEWHLIILSPKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPE
LVKETAELAIAHIQKYNPELAKKLLIHDQEIGRGAIASTDLTTVVSRVVDYLQIGQEQLSIPAAVRHQALDSNLVSNEIQ
AFLRMAQLMDLADITNPQAATEVAALAETLGQLLDLPAWQIKRLKLAGLLHRIDPLQKAESIFTPGTSTHHQESAPSCPL
TCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGLAGDEIPLESRILALVADFQWQVNQKRAASKNRQEIFVQAL
EECRQQANRFDPKLIDALFLLVMGLQQGLDLPLMTPKVSIGMWLLDSRWDSQSKTSEEMSSYPQ

Sequences:

>Translated_464_residues
MLEGSILQQLEASHRYSTRPVRFGVYYKNTLVALCHALEDHILADENSPLVITAFQRGKWYLQEAERYADIAQCSRQIAI
MAAPDAGFAEHPTSQMPNVDLVALDPSDPVAQEWHLIILSPKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPE
LVKETAELAIAHIQKYNPELAKKLLIHDQEIGRGAIASTDLTTVVSRVVDYLQIGQEQLSIPAAVRHQALDSNLVSNEIQ
AFLRMAQLMDLADITNPQAATEVAALAETLGQLLDLPAWQIKRLKLAGLLHRIDPLQKAESIFTPGTSTHHQESAPSCPL
TCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGLAGDEIPLESRILALVADFQWQVNQKRAASKNRQEIFVQAL
EECRQQANRFDPKLIDALFLLVMGLQQGLDLPLMTPKVSIGMWLLDSRWDSQSKTSEEMSSYPQ
>Mature_464_residues
MLEGSILQQLEASHRYSTRPVRFGVYYKNTLVALCHALEDHILADENSPLVITAFQRGKWYLQEAERYADIAQCSRQIAI
MAAPDAGFAEHPTSQMPNVDLVALDPSDPVAQEWHLIILSPKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPE
LVKETAELAIAHIQKYNPELAKKLLIHDQEIGRGAIASTDLTTVVSRVVDYLQIGQEQLSIPAAVRHQALDSNLVSNEIQ
AFLRMAQLMDLADITNPQAATEVAALAETLGQLLDLPAWQIKRLKLAGLLHRIDPLQKAESIFTPGTSTHHQESAPSCPL
TCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGLAGDEIPLESRILALVADFQWQVNQKRAASKNRQEIFVQAL
EECRQQANRFDPKLIDALFLLVMGLQQGLDLPLMTPKVSIGMWLLDSRWDSQSKTSEEMSSYPQ

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51649; Mature: 51649

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGSILQQLEASHRYSTRPVRFGVYYKNTLVALCHALEDHILADENSPLVITAFQRGKW
CCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH
YLQEAERYADIAQCSRQIAIMAAPDAGFAEHPTSQMPNVDLVALDPSDPVAQEWHLIILS
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEC
PKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPELVKETAELAIAHIQKYNPEL
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHH
AKKLLIHDQEIGRGAIASTDLTTVVSRVVDYLQIGQEQLSIPAAVRHQALDSNLVSNEIQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHH
AFLRMAQLMDLADITNPQAATEVAALAETLGQLLDLPAWQIKRLKLAGLLHRIDPLQKAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHH
SIFTPGTSTHHQESAPSCPLTCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGL
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGDEIPLESRILALVADFQWQVNQKRAASKNRQEIFVQALEECRQQANRFDPKLIDALFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVMGLQQGLDLPLMTPKVSIGMWLLDSRWDSQSKTSEEMSSYPQ
HHHHHHHCCCCCCCCCCHHHCEEEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MLEGSILQQLEASHRYSTRPVRFGVYYKNTLVALCHALEDHILADENSPLVITAFQRGKW
CCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH
YLQEAERYADIAQCSRQIAIMAAPDAGFAEHPTSQMPNVDLVALDPSDPVAQEWHLIILS
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEC
PKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPELVKETAELAIAHIQKYNPEL
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHH
AKKLLIHDQEIGRGAIASTDLTTVVSRVVDYLQIGQEQLSIPAAVRHQALDSNLVSNEIQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHH
AFLRMAQLMDLADITNPQAATEVAALAETLGQLLDLPAWQIKRLKLAGLLHRIDPLQKAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHH
SIFTPGTSTHHQESAPSCPLTCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGL
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGDEIPLESRILALVADFQWQVNQKRAASKNRQEIFVQALEECRQQANRFDPKLIDALFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVMGLQQGLDLPLMTPKVSIGMWLLDSRWDSQSKTSEEMSSYPQ
HHHHHHHCCCCCCCCCCHHHCEEEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA