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The map label for this gene is yjcF [C]

Identifier: 17231795

GI number: 17231795

Start: 5158040

End: 5158681

Strand: Reverse

Name: yjcF [C]

Synonym: all4303

Alternate gene names: 17231795

Gene position: 5158681-5158040 (Counterclockwise)

Preceding gene: 17231796

Following gene: 17231792

Centisome position: 80.43

GC content: 45.95

Gene sequence:

>642_bases
ATGAATATTGACGCTATTAAACTAGGACAACTCAAACAACTGCCAGGGGCGAATTTAGAAGATGAGGAACTTTCTCAACT
GGATTTAAGCCGCATTAATTTAGCTGGCGCTCACCTTGTGGGTACTAACTTTACTCGCTCTAAACTCGAAGGTGGACATT
TAGAGGGTGCAAATTTGATGGGTGCAACTCTCCAAGAAACTGACTTGCGGGCAAACTTGATGGGAGCCAATTTGATGCAG
GCAGATTTAACAGGGGCAGACTTGCGGGGTAGTAATTTGCGTGGTGCTAATCTGATGGGAGCTAGACTTAGTGGTGTAGC
TTTGGCTGGTGCTTTTTTGAGTGGCGCTAATTTAATGAACGTCAATTTACAAGGCGTTGATCTACGGGGCGCTGACTTGC
GAGGTGTTAACCTAAGTGGTGCTAACCTGAAAGGCGCAGACTTAAGCCGTGCTGATTTGCAAGGGGCGTTGTTGAGTGAA
GCGAATCTCGAAGAAGCCGATTTACGGGGGGCGAATCTGGCGGGAGTGAATTTGACCGGGGCTAACTTACTCTGTGCAGA
GTTGGAAGGTGCAAATTTACAAGGTGTGAATACAGATAAAGCTTGTTTGGTAGGGACAATATTAGAAATTGGTAATGGGT
AA

Upstream 100 bases:

>100_bases
TACCCCTAATGACACCAAAAGTCAGCATCGGTATGTGGCTACTTGATTCCCGATGGGATAGCCAGAGCAAGACTAGTGAA
GAGATGAGTAGTTACCCACA

Downstream 100 bases:

>100_bases
TGGGTAATTGGTGATTGGTTGTTACCATTACCCATTCTCACAGTTGATATTATTCGTCCTCGTCTTCGTCGTCATAGCGG
TCTCTGCCAGAACGACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNIDAIKLGQLKQLPGANLEDEELSQLDLSRINLAGAHLVGTNFTRSKLEGGHLEGANLMGATLQETDLRANLMGANLMQ
ADLTGADLRGSNLRGANLMGARLSGVALAGAFLSGANLMNVNLQGVDLRGADLRGVNLSGANLKGADLSRADLQGALLSE
ANLEEADLRGANLAGVNLTGANLLCAELEGANLQGVNTDKACLVGTILEIGNG

Sequences:

>Translated_213_residues
MNIDAIKLGQLKQLPGANLEDEELSQLDLSRINLAGAHLVGTNFTRSKLEGGHLEGANLMGATLQETDLRANLMGANLMQ
ADLTGADLRGSNLRGANLMGARLSGVALAGAFLSGANLMNVNLQGVDLRGADLRGVNLSGANLKGADLSRADLQGALLSE
ANLEEADLRGANLAGVNLTGANLLCAELEGANLQGVNTDKACLVGTILEIGNG
>Mature_213_residues
MNIDAIKLGQLKQLPGANLEDEELSQLDLSRINLAGAHLVGTNFTRSKLEGGHLEGANLMGATLQETDLRANLMGANLMQ
ADLTGADLRGSNLRGANLMGARLSGVALAGAFLSGANLMNVNLQGVDLRGADLRGVNLSGANLKGADLSRADLQGALLSE
ANLEEADLRGANLAGVNLTGANLLCAELEGANLQGVNTDKACLVGTILEIGNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=160, Percent_Identity=36.25, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI221377802, Length=167, Percent_Identity=35.9281437125749, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 21822; Mature: 21822

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDAIKLGQLKQLPGANLEDEELSQLDLSRINLAGAHLVGTNFTRSKLEGGHLEGANLM
CCCCCEECCCHHCCCCCCCCHHHHHHHHHHHEEECCEEEEECCCCHHHCCCCCCCCCCCC
GATLQETDLRANLMGANLMQADLTGADLRGSNLRGANLMGARLSGVALAGAFLSGANLMN
CCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCEEEHHHHCCCEEEE
VNLQGVDLRGADLRGVNLSGANLKGADLSRADLQGALLSEANLEEADLRGANLAGVNLTG
EEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCEEEEEEECC
ANLLCAELEGANLQGVNTDKACLVGTILEIGNG
CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNIDAIKLGQLKQLPGANLEDEELSQLDLSRINLAGAHLVGTNFTRSKLEGGHLEGANLM
CCCCCEECCCHHCCCCCCCCHHHHHHHHHHHEEECCEEEEECCCCHHHCCCCCCCCCCCC
GATLQETDLRANLMGANLMQADLTGADLRGSNLRGANLMGARLSGVALAGAFLSGANLMN
CCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCEEEHHHHCCCEEEE
VNLQGVDLRGADLRGVNLSGANLKGADLSRADLQGALLSEANLEEADLRGANLAGVNLTG
EEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCEEEEEEECC
ANLLCAELEGANLQGVNTDKACLVGTILEIGNG
CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA