| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231784
Identifier: 17231784
GI number: 17231784
Start: 5146426
End: 5146929
Strand: Reverse
Name: 17231784
Synonym: all4292
Alternate gene names: NA
Gene position: 5146929-5146426 (Counterclockwise)
Preceding gene: 17231786
Following gene: 17231781
Centisome position: 80.25
GC content: 41.67
Gene sequence:
>504_bases ATGCGCCTTAAAGTATTATTGGGTAGAGCGATCGCCAGTTTAGCAATACTCAATGGATATACCATCCCACCGAGTCAAGC AATTCAGTTGCAAGATGGTACAGTCTATTTTGTCCAACCACCACGCCTTGTAGAAACTGTAACCACATACAATCAGGTCA ATGTCTGGGGCGCAACATATTATTTCACAGTCAACTTGCCAGAAAACGCTAGCGAACCCTTACAAAAACTCACAATTAAC CAACATCAGGGAGTAGATAATATTCGCTTCGACCTCAAAAATAGTTTTGCTTTTGAAGGTACACGCTCCCATAGAGGACA GAGAATTGGATTAAAAGATGCGGCTGATAATCGTCAAACCAGAACAGTATCTCTAATATTTGACCCGCCAGTATCTCCAG GTAAAACCATCACAATTGGCTTGAAACCTTGGCAAAATCCAACCATCTCAGGAGTATATCTATTTGGGGTTACAGCTTTT CCCGCAGGAGAAAAAAACTCATAG
Upstream 100 bases:
>100_bases TCTTGGTAATTTATTAATAATAAATGTTAAGTTTATGGGCTAATTATTTTAGATATTGAGCAAGTATAATTACTATCTAA TGAGTCAAACAAGCTGAGTC
Downstream 100 bases:
>100_bases CCAATTCCTCGGTTTTGGTAGATTACATTTTTACAATCACAGTAGCGGCCGTTTCCCTTTCTGGTAAGTAAGGGTATAGG GGTATAGGGGTATAAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRLKVLLGRAIASLAILNGYTIPPSQAIQLQDGTVYFVQPPRLVETVTTYNQVNVWGATYYFTVNLPENASEPLQKLTIN QHQGVDNIRFDLKNSFAFEGTRSHRGQRIGLKDAADNRQTRTVSLIFDPPVSPGKTITIGLKPWQNPTISGVYLFGVTAF PAGEKNS
Sequences:
>Translated_167_residues MRLKVLLGRAIASLAILNGYTIPPSQAIQLQDGTVYFVQPPRLVETVTTYNQVNVWGATYYFTVNLPENASEPLQKLTIN QHQGVDNIRFDLKNSFAFEGTRSHRGQRIGLKDAADNRQTRTVSLIFDPPVSPGKTITIGLKPWQNPTISGVYLFGVTAF PAGEKNS >Mature_167_residues MRLKVLLGRAIASLAILNGYTIPPSQAIQLQDGTVYFVQPPRLVETVTTYNQVNVWGATYYFTVNLPENASEPLQKLTIN QHQGVDNIRFDLKNSFAFEGTRSHRGQRIGLKDAADNRQTRTVSLIFDPPVSPGKTITIGLKPWQNPTISGVYLFGVTAF PAGEKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18476; Mature: 18476
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKVLLGRAIASLAILNGYTIPPSQAIQLQDGTVYFVQPPRLVETVTTYNQVNVWGATY CEEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHCCCEEEEEEEEE YFTVNLPENASEPLQKLTINQHQGVDNIRFDLKNSFAFEGTRSHRGQRIGLKDAADNRQT EEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCE RTVSLIFDPPVSPGKTITIGLKPWQNPTISGVYLFGVTAFPAGEKNS EEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure MRLKVLLGRAIASLAILNGYTIPPSQAIQLQDGTVYFVQPPRLVETVTTYNQVNVWGATY CEEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHCCCEEEEEEEEE YFTVNLPENASEPLQKLTINQHQGVDNIRFDLKNSFAFEGTRSHRGQRIGLKDAADNRQT EEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCE RTVSLIFDPPVSPGKTITIGLKPWQNPTISGVYLFGVTAFPAGEKNS EEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA