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The map label for this gene is ndhN [H]

Identifier: 17231708

GI number: 17231708

Start: 5053254

End: 5053742

Strand: Direct

Name: ndhN [H]

Synonym: alr4216

Alternate gene names: 17231708

Gene position: 5053254-5053742 (Clockwise)

Preceding gene: 17231670

Following gene: 17231714

Centisome position: 78.79

GC content: 45.81

Gene sequence:

>489_bases
ATGGCACTAATTACCACTGGTAACGGTTTAATTCGGGATCTAGAGAAATTTGGATCTGTAGGAGTTTACGTACCTCTAGA
AGGAGGTTTTGAAGGTCGATATCGGCGGCGGTTGCGTGCTGCTGGCTATACAACTCTGCAATTTACTGCTAGGGGATTAG
GCGATGTAGCAGCCTATCTCACAGGAGTTCACGGGGTAAGACCTCCCCATCTGGGCAAAAAAAGCTCTGGTAATGGTGCA
GCAGTAGGGAATGTATATTATCTGCCACCAATTGTTGGTTCTCAGCTAGAACACCTGCCACCCAAGTCTAAGGGTTTGGT
GTTGTGGATCATTGAAGGGCATATTTTATCTGATCAAGAAGTCGAGTTCTTGACCAGTTTACCAAGTCTGGAACCAAGAG
TGAAGGTAGTTGTTGAGAGAGGAGGCGATCGCACTTTCCGTTGGAAGGCTCTAAAAGATACATTCTCTGCTAGTTATCAA
GCTGTTTAG

Upstream 100 bases:

>100_bases
GCTTATTTAAAGTATAAGCTTCCTGATCTAACTGAATCTCTCACTTCACAGTAAATAATAGAGATATGGAAGTGGGATAT
GACAAAACCTCAGAAAATCT

Downstream 100 bases:

>100_bases
ATGACAGGGGACTGCTGAGACAGCGCTGCCGGAGGGTTTCCCTCCGCAGGCGACTGTGTTCGCCGTTCGCGGAGCGTTCC
GTAGGAAAGGCGTTCTCGTT

Product: hypothetical protein

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit N; NDH-1 subunit N; NDH-N [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MALITTGNGLIRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPHLGKKSSGNGA
AVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSLEPRVKVVVERGGDRTFRWKALKDTFSASYQ
AV

Sequences:

>Translated_162_residues
MALITTGNGLIRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPHLGKKSSGNGA
AVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSLEPRVKVVVERGGDRTFRWKALKDTFSASYQ
AV
>Mature_161_residues
ALITTGNGLIRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPHLGKKSSGNGAA
VGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSLEPRVKVVVERGGDRTFRWKALKDTFSASYQA
V

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhN subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020874 [H]

Pfam domain/function: PF11909 NdhN [H]

EC number: 1.6.5.3

Molecular weight: Translated: 17638; Mature: 17506

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITTGNGLIRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYL
CEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
TGVHGVRPPHLGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQE
HHCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCHHHHCCCCCCCEEEEEEECEEECCCH
VEFLTSLPSLEPRVKVVVERGGDRTFRWKALKDTFSASYQAV
HHHHHCCCCCCCEEEEEEECCCCCEEEEEEHHHHHCCCCCCC
>Mature Secondary Structure 
ALITTGNGLIRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYL
EEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
TGVHGVRPPHLGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQE
HHCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCHHHHCCCCCCCEEEEEEECEEECCCH
VEFLTSLPSLEPRVKVVVERGGDRTFRWKALKDTFSASYQAV
HHHHHCCCCCCCEEEEEEECCCCCEEEEEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA