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The map label for this gene is aapJ [H]

Identifier: 17231656

GI number: 17231656

Start: 5010491

End: 5011600

Strand: Direct

Name: aapJ [H]

Synonym: alr4164

Alternate gene names: 17231656

Gene position: 5010491-5011600 (Clockwise)

Preceding gene: 17231653

Following gene: 17231657

Centisome position: 78.12

GC content: 44.77

Gene sequence:

>1110_bases
ATGGTATTCAGCAACACTTTTCGAGGGTCATTAACTGAGATGTTTATGAATAAATTAGCTGTTATCCTGGGCGCATCATT
AATTTTTACTACTACTGCTTGTGGAGGAGATTCAGCGCCAACAACCGATACATCTACTAATTCAGGAAGTACATTAGTAG
CAAATCGCTGGAATACGATCAAAAACCGTGGTCAGTTAATTTGCGGTGTCAGTGGCGAAGTTCCAGGATTCAGTTTTGTG
GGAACTGACGGCGAGTATAGCGGTATTGATGTAGATGTTTGTCGGGCGATCGCCGCAGCTTTGTTTGACAACCCAGATGC
AGTAGAATTTCGTAACCTCAGCGCGAAAGAACGATTTACGGCGCTACAAACTGGGGAAGTAGATATTCTCAGCCGTAACA
CTACTTGGACACTCAGCCGCGCTACCTCAGTGGGTCTAGAATTTGCACCTGTAGTCTTTTACGACGGTCAAGCAATCATG
GTTCGCAAAAATAGCGCCATCAAGTCTCTAGCAGACCTGAAAGACAAAGCCATATGTGTGCAAACAGGTACTACAACTGA
GCAGAACTTAGCAGACCAAATGCGGAAGCGCAACATCACCTATAAGCCAGTTGTGTTTGAAGACGTTAACGTTACCTTTG
CTACCTACGCTGAAGGACGTTGCGATGCAATTACCGCCGACCGTTCAGCCTTGGTATCCAGACGCACAACCCTACCCACA
CCTGAGGATAATGTGGTTTTGGATGAAGTTATTTCTTCAGAACCACTTGCACCAGCCGTTGCTAGAGGAGATGCTAAATG
GAGTAACACTGTAAATTGGGTAGTTTATGCCTTAATTAAAGGTGAAGAATTAGGAATTAATGCTCAAAATTTAGGTCAAT
TTACAACTAGTAACGACCCAGATGTGAAACGCTTTTTAGGCACCGAAGGTGATTTAGGTCAAGGACTTGGTTTAACTAAC
GACTTCGCCGCCAGAATCATCAAACACGTCGGGAACTATGCCGAAGTTTACGATCGCAACCTCGGCCCCAAGACAAAGCT
TAATTTAGCACGCGGTCAAAACCAACTGTGGTCAAAAGGCGGGTTATTATACTCTCCACCATTCCGGTAA

Upstream 100 bases:

>100_bases
CCATTACTAGTTTCTATGAGCAGTTTCATAAATTAAATAGGATGGTGAGAAGTACCCAAAAGGTTCTATATTACAAACAT
CAATTTGTTGCCACGACTTT

Downstream 100 bases:

>100_bases
AAGAGTAAGGAAAAATGACTATTGACTATCTATATACAGAAATTGCACCGCAACGTCTCAATGACCAATGACCAACGAAA
AACCTCCTTTTTGGCGTGAT

Product: periplasmic amino acid-binding protein of amino acid ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVFSNTFRGSLTEMFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVPGFSFV
GTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIM
VRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPT
PEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTTSNDPDVKRFLGTEGDLGQGLGLTN
DFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR

Sequences:

>Translated_369_residues
MVFSNTFRGSLTEMFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVPGFSFV
GTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIM
VRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPT
PEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTTSNDPDVKRFLGTEGDLGQGLGLTN
DFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR
>Mature_369_residues
MVFSNTFRGSLTEMFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVPGFSFV
GTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIM
VRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPT
PEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTTSNDPDVKRFLGTEGDLGQGLGLTN
DFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=228, Percent_Identity=24.5614035087719, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788228, Length=229, Percent_Identity=26.6375545851528, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 39981; Mature: 39981

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSNTFRGSLTEMFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCHHH
KNRGQLICGVSGEVPGFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFT
CCCCCEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHH
ALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICV
EEECCCEEEEECCCEEEEECHHHCCCEEEEEEEECCCEEEEECCHHHHHHHHCCCCEEEE
QTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPT
ECCCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCEEECCHHHHHHHCCCCCC
PEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTTSNDP
CCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCCCCCCCCC
DVKRFLGTEGDLGQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEHHHCCHHHHHCC
GLLYSPPFR
CEEECCCCC
>Mature Secondary Structure
MVFSNTFRGSLTEMFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCHHH
KNRGQLICGVSGEVPGFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFT
CCCCCEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHH
ALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICV
EEECCCEEEEECCCEEEEECHHHCCCEEEEEEEECCCEEEEECCHHHHHHHHCCCCEEEE
QTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPT
ECCCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCEEECCHHHHHHHCCCCCC
PEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTTSNDP
CCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCCCCCCCCC
DVKRFLGTEGDLGQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEHHHCCHHHHHCC
GLLYSPPFR
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]