| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231631
Identifier: 17231631
GI number: 17231631
Start: 4983553
End: 4984269
Strand: Reverse
Name: 17231631
Synonym: all4139
Alternate gene names: NA
Gene position: 4984269-4983553 (Counterclockwise)
Preceding gene: 17231632
Following gene: 17231630
Centisome position: 77.71
GC content: 37.8
Gene sequence:
>717_bases ATGACCAATCCAAAGCGACAAACTACAGGGTTTATAACGTGTAATCATTGTGGAAACCATTCTCCAATGGATATTGTGGC TGAATATTACCATTCTCTAAAACCTTCTACCTATGACTCTCCAGAAGACGAGTATTATTATTCTTATCAGCCAGATGAAG GGTACAAGTATGAATTGTTATTATGCCTAGCCTGTAAAGGAGTAACGCTATGGAAGTATTTTGATGCTGATTATATAGAT CCAGAAGAAATCACGGTTGATACCCTTTACCCATTAGCTAGATCGAAGTTATCTGGTCTACCTTATCAAATTCAAAACGC ATATGAAATATCGCTTAAGGTTCGTGTCATCGATGCTAATGCTTATGCAGTTCTGTTAGGACGTATACTAGAGATGGTGT GTGCAGATCGTAAAGCTACAGGAAAGGATTTATACAATAAGCTGAATGATCTAGCTGCAAAAGGTGAAATTCCAGGCAAA TTAGTAGGAGTCGCCGATCAACTTCGACATTTACGAAATGTTGGCGCTCATGCTTCTCTGGGGGAATTAACTAAAGAAGA AATTCCAATACTAGATGATCTGTGCAGAGCAATTTTGGAATATGTCTACAGTGCGCCATACTTAGCAAATAAAGCACAAC AGCAACTTAAACGCTTGAAAGAAAAATGGGCTAAGAAAGAAGAAGTAAGTGACAAATATTCAGAAAATCCAGAATGA
Upstream 100 bases:
>100_bases ATTCTGGAACAAGAATGTCAGATATAGCTTATGACATTTATTTTTTCAATAAAGTATGCTGTGTACTGGCAAAGTGTTAT GAGGAACTGAAGGTAGATTC
Downstream 100 bases:
>100_bases TTTAGCCATATAGCAGCTTAGGGGTTTAGTGAAAATTTCAGATAATTTTGATGAGCGTTTGGCAGATTTTGAGAAATACG ATCAATGAGGCTCATGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTNPKRQTTGFITCNHCGNHSPMDIVAEYYHSLKPSTYDSPEDEYYYSYQPDEGYKYELLLCLACKGVTLWKYFDADYID PEEITVDTLYPLARSKLSGLPYQIQNAYEISLKVRVIDANAYAVLLGRILEMVCADRKATGKDLYNKLNDLAAKGEIPGK LVGVADQLRHLRNVGAHASLGELTKEEIPILDDLCRAILEYVYSAPYLANKAQQQLKRLKEKWAKKEEVSDKYSENPE
Sequences:
>Translated_238_residues MTNPKRQTTGFITCNHCGNHSPMDIVAEYYHSLKPSTYDSPEDEYYYSYQPDEGYKYELLLCLACKGVTLWKYFDADYID PEEITVDTLYPLARSKLSGLPYQIQNAYEISLKVRVIDANAYAVLLGRILEMVCADRKATGKDLYNKLNDLAAKGEIPGK LVGVADQLRHLRNVGAHASLGELTKEEIPILDDLCRAILEYVYSAPYLANKAQQQLKRLKEKWAKKEEVSDKYSENPE >Mature_237_residues TNPKRQTTGFITCNHCGNHSPMDIVAEYYHSLKPSTYDSPEDEYYYSYQPDEGYKYELLLCLACKGVTLWKYFDADYIDP EEITVDTLYPLARSKLSGLPYQIQNAYEISLKVRVIDANAYAVLLGRILEMVCADRKATGKDLYNKLNDLAAKGEIPGKL VGVADQLRHLRNVGAHASLGELTKEEIPILDDLCRAILEYVYSAPYLANKAQQQLKRLKEKWAKKEEVSDKYSENPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27120; Mature: 26989
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPKRQTTGFITCNHCGNHSPMDIVAEYYHSLKPSTYDSPEDEYYYSYQPDEGYKYELL CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHEEH LCLACKGVTLWKYFDADYIDPEEITVDTLYPLARSKLSGLPYQIQNAYEISLKVRVIDAN EEEHHCCCEEEEECCCCCCCHHHEEHHHHHHHHHHHHCCCCEEECCEEEEEEEEEEEECC AYAVLLGRILEMVCADRKATGKDLYNKLNDLAAKGEIPGKLVGVADQLRHLRNVGAHASL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH GELTKEEIPILDDLCRAILEYVYSAPYLANKAQQQLKRLKEKWAKKEEVSDKYSENPE HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNPKRQTTGFITCNHCGNHSPMDIVAEYYHSLKPSTYDSPEDEYYYSYQPDEGYKYELL CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHEEH LCLACKGVTLWKYFDADYIDPEEITVDTLYPLARSKLSGLPYQIQNAYEISLKVRVIDAN EEEHHCCCEEEEECCCCCCCHHHEEHHHHHHHHHHHHCCCCEEECCEEEEEEEEEEEECC AYAVLLGRILEMVCADRKATGKDLYNKLNDLAAKGEIPGKLVGVADQLRHLRNVGAHASL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH GELTKEEIPILDDLCRAILEYVYSAPYLANKAQQQLKRLKEKWAKKEEVSDKYSENPE HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA