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The map label for this gene is arnC [H]

Identifier: 17231618

GI number: 17231618

Start: 4971074

End: 4972318

Strand: Reverse

Name: arnC [H]

Synonym: all4126

Alternate gene names: 17231618

Gene position: 4972318-4971074 (Counterclockwise)

Preceding gene: 17231619

Following gene: 17231617

Centisome position: 77.53

GC content: 43.78

Gene sequence:

>1245_bases
ATGAAAATCAACATCGCCAATGAATTATTAACTGTCCCAACTGGCCTTTTACAAGTCTCTGATGTACCACCGAATAGTGT
CGGTACTGGTCATAGAGATATATATTTTTCTCTAATAATCCCCACCTATAAAGAACGGGACAATATTGAAAATGTTGTCA
AAATTTTGAGTCAAACTCTAGATGAATTTATCCCAGGAGATTACGAATTAATTGTTGTGGATGATGATAGCCCAGACATG
ACTTGGGAAGTTGCCCACTCTTTGACTGAAGAGTATCCCCAACTGCGGGTAATGCGACGACAACAGGAACGAGGGCTATC
TTCCGCCGTCGTTCGTGGTTGGCAGGTAGCGAGAGGAAAAGTTCTAGGGGTAATTGATGGAGATTTACAGCATCCACCAG
AAGTTTTAACACAACTGTTGACAAAAATTACCCAGGGAGCAGATTTGGCATTAGCCAGTCGTCACGTAGATGGTGGCGGT
GTCAGTAGTTGGAGTGTAGTCAGACGTTTCTTGTCTCGTGGCGCTCAAGTTTTGGGGTTAATGCTGCTACCGGGAGTATT
GGGAAGAGTTTCTGACCCCATGAGTGGCTATTTTATGGTGCGTCGCAGTAGTGTAGCCGGGGCAACACTCAACCCAGTGG
GATACAAAATTCTGTTAGAGGTAATTGGGCGGGGTAATGTCAAAAATATTGCTGAAGTTGGTTATGTGTTCTGCGAACGC
CAGCAGGGTGAAAGTAAAGTCACATGGAAGCAATACATAGACTATGTTCACCATTTAGTCCGGTTGCGTTTATCTACTGG
GCGTGTAGGTCGAGTCAAGCAAAAAATAAACTTCCCTATAGATCGATTTCTGCGCTTTGCCTTGGTGGGACTGAGTGGAG
TGTTTGTAGATATGGTACTGCTGTATTTACTCAGTGACCCCTCAACCTTGGCTTTGCCCCTGACTCGCAGCAAAATTATT
GCAGGTGAAATCGCTATCTTCAATAACTTTTTGTGGAATGATGCTTGGACGTTTGCTGATGTGACCATGAAACAACAGGA
ATGGCATCAACGCCTGAAGCGATTTGCTAAATTTAACGTTATTTGTTTGGCGGGATTGGTGCTGAATGTATTGGTGTTGA
ATTTAGTGTTTAATTTCCTCATTCCTAACCGCTACGTTGCTAACCTAGTAGCGATCGCCGTTGCTACTATTTGGAATTTC
TGGGTTAACCTCAAACTTAGCTGGCGAGTCACTGACGTAAAATAG

Upstream 100 bases:

>100_bases
GAAGGATAATAGATTCCCTCAAAAGCAACTGACTAATGACAACTGACTATTAACGCCTACTGTACACATAAGCTCTATTT
TTTACCTCACATCTACATTT

Downstream 100 bases:

>100_bases
TCAGCGAACTTAAATTGTCATGTGCGGTCTAATATATACAAATTGACTTGTTCTGCCACTTGGCTTTTCGCAAGGAATAG
ATTGGTTTGTATAATTGGCA

Product: dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKINIANELLTVPTGLLQVSDVPPNSVGTGHRDIYFSLIIPTYKERDNIENVVKILSQTLDEFIPGDYELIVVDDDSPDM
TWEVAHSLTEEYPQLRVMRRQQERGLSSAVVRGWQVARGKVLGVIDGDLQHPPEVLTQLLTKITQGADLALASRHVDGGG
VSSWSVVRRFLSRGAQVLGLMLLPGVLGRVSDPMSGYFMVRRSSVAGATLNPVGYKILLEVIGRGNVKNIAEVGYVFCER
QQGESKVTWKQYIDYVHHLVRLRLSTGRVGRVKQKINFPIDRFLRFALVGLSGVFVDMVLLYLLSDPSTLALPLTRSKII
AGEIAIFNNFLWNDAWTFADVTMKQQEWHQRLKRFAKFNVICLAGLVLNVLVLNLVFNFLIPNRYVANLVAIAVATIWNF
WVNLKLSWRVTDVK

Sequences:

>Translated_414_residues
MKINIANELLTVPTGLLQVSDVPPNSVGTGHRDIYFSLIIPTYKERDNIENVVKILSQTLDEFIPGDYELIVVDDDSPDM
TWEVAHSLTEEYPQLRVMRRQQERGLSSAVVRGWQVARGKVLGVIDGDLQHPPEVLTQLLTKITQGADLALASRHVDGGG
VSSWSVVRRFLSRGAQVLGLMLLPGVLGRVSDPMSGYFMVRRSSVAGATLNPVGYKILLEVIGRGNVKNIAEVGYVFCER
QQGESKVTWKQYIDYVHHLVRLRLSTGRVGRVKQKINFPIDRFLRFALVGLSGVFVDMVLLYLLSDPSTLALPLTRSKII
AGEIAIFNNFLWNDAWTFADVTMKQQEWHQRLKRFAKFNVICLAGLVLNVLVLNLVFNFLIPNRYVANLVAIAVATIWNF
WVNLKLSWRVTDVK
>Mature_414_residues
MKINIANELLTVPTGLLQVSDVPPNSVGTGHRDIYFSLIIPTYKERDNIENVVKILSQTLDEFIPGDYELIVVDDDSPDM
TWEVAHSLTEEYPQLRVMRRQQERGLSSAVVRGWQVARGKVLGVIDGDLQHPPEVLTQLLTKITQGADLALASRHVDGGG
VSSWSVVRRFLSRGAQVLGLMLLPGVLGRVSDPMSGYFMVRRSSVAGATLNPVGYKILLEVIGRGNVKNIAEVGYVFCER
QQGESKVTWKQYIDYVHHLVRLRLSTGRVGRVKQKINFPIDRFLRFALVGLSGVFVDMVLLYLLSDPSTLALPLTRSKII
AGEIAIFNNFLWNDAWTFADVTMKQQEWHQRLKRFAKFNVICLAGLVLNVLVLNLVFNFLIPNRYVANLVAIAVATIWNF
WVNLKLSWRVTDVK

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=241, Percent_Identity=32.3651452282158, Blast_Score=115, Evalue=1e-25,
Organism=Escherichia coli, GI1788588, Length=234, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71999402, Length=235, Percent_Identity=31.9148936170213, Blast_Score=111, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6325441, Length=238, Percent_Identity=34.453781512605, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24585265, Length=247, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 46569; Mature: 46569

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINIANELLTVPTGLLQVSDVPPNSVGTGHRDIYFSLIIPTYKERDNIENVVKILSQTL
CEEEHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
DEFIPGDYELIVVDDDSPDMTWEVAHSLTEEYPQLRVMRRQQERGLSSAVVRGWQVARGK
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VLGVIDGDLQHPPEVLTQLLTKITQGADLALASRHVDGGGVSSWSVVRRFLSRGAQVLGL
EEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
MLLPGVLGRVSDPMSGYFMVRRSSVAGATLNPVGYKILLEVIGRGNVKNIAEVGYVFCER
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
QQGESKVTWKQYIDYVHHLVRLRLSTGRVGRVKQKINFPIDRFLRFALVGLSGVFVDMVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYLLSDPSTLALPLTRSKIIAGEIAIFNNFLWNDAWTFADVTMKQQEWHQRLKRFAKFNV
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ICLAGLVLNVLVLNLVFNFLIPNRYVANLVAIAVATIWNFWVNLKLSWRVTDVK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
>Mature Secondary Structure
MKINIANELLTVPTGLLQVSDVPPNSVGTGHRDIYFSLIIPTYKERDNIENVVKILSQTL
CEEEHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
DEFIPGDYELIVVDDDSPDMTWEVAHSLTEEYPQLRVMRRQQERGLSSAVVRGWQVARGK
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VLGVIDGDLQHPPEVLTQLLTKITQGADLALASRHVDGGGVSSWSVVRRFLSRGAQVLGL
EEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
MLLPGVLGRVSDPMSGYFMVRRSSVAGATLNPVGYKILLEVIGRGNVKNIAEVGYVFCER
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
QQGESKVTWKQYIDYVHHLVRLRLSTGRVGRVKQKINFPIDRFLRFALVGLSGVFVDMVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYLLSDPSTLALPLTRSKIIAGEIAIFNNFLWNDAWTFADVTMKQQEWHQRLKRFAKFNV
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ICLAGLVLNVLVLNLVFNFLIPNRYVANLVAIAVATIWNFWVNLKLSWRVTDVK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA