| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231619
Identifier: 17231619
GI number: 17231619
Start: 4972867
End: 4974561
Strand: Reverse
Name: 17231619
Synonym: all4127
Alternate gene names: NA
Gene position: 4974561-4972867 (Counterclockwise)
Preceding gene: 17231620
Following gene: 17231618
Centisome position: 77.56
GC content: 39.76
Gene sequence:
>1695_bases ATGAATCCTGGGGTTCCAGTTACTAAACTTAATAAACTAGTTTCTCTAGAAACTTTAGCATTAGTAGCGATCGCTATCGC CGTGCTATTACGTATAGTGAATTTAGGTAGCCGAGAATTTTGGTATGACGAAGTGCTATCTCTACTCTTAGCTACAGGCC AAAAAAGTGCCTACCAGACCCCCAAAGATATACCAGTAGCCTTGGCTGAATATTTGCCGTTACTCTCCTTACCTGTTGAA TCGGGTTTTAGTGCAGTTATCTCTACCGTAAAAGAATTACTGCTGAGTCTACTGGGAGGGGAACCGCATCCACCATTATT TTATTTGAGTCAGCATTTTTGGTTGCGCCTTTTCGGTAACAGCGAAGCAGTCATGCGGAGTTTAAATACATTATTCAGTA TTGGCGCGATCGCTAGTGCTTACAGTTTAGGTAAAGTTTTTATTGGACATCGTGGCGGCTTACTGCTGGCGGCGTTTCTG GGAATCAACCCCTTTTATTTATTCCACTCTCTGAATGTGCGGATGTATGCGCCTTTAGTTTTGTGGACAACACTAAGTGC TGCTTCACTCTTTCATCTAATTCATCAACCTACCGATTCAAAAGCTAATCATAACTGTCGTCATAAGTTGTGGTGGAACA TCCTATTTATCGGTTCCATTGCTGCTGGTTTGTTGACCTTTTATTTTTATTTATATTGGGTAATAGCTTTAGCCGTTTTA GTGCTTTACCTTGATAGGCAGCATTGGTGGCAACATGGTTTGCGTTTAGGCGCAGGAGTGATGCTAACCGTCCCTTGGAT GCTGTGGGGGGGTATTAAACAAATCCGTAGTGCAGATTTGAACAGGTTTGGTAATCTTAAAAATACTGGTTCAGCAATAT TAACTCACTTGCAAGACACAACTCAGACCTTAGCCAGTAATTTAGTCTTGGGAGACTGGATAACAAGCTTACCCACAATC AGTATAGTTATAGTTGGTTGTTTAGCGATCGCCTTGATCATTGCCTCTAGTCTGAAACTTTGGCGACAAGGTGAGCGAAA AAACTTGACTGTAGCTTTAATATTAGGAATTTTGCCTCTTTTAATAGCTTTAGGATTAGATATAGTCACTAAAAAGACTA CTTTAAATTTTGGTGGTGGAAGAACCATGATCATTATTCTTCCTGGGTGTTTATTATTATTAACTTTGTGGTTAGAAAAA GCCTTTTCTTCACAATGGCGCACACTAGTAGTTTCTGGTTTATTGCTGTTATATCTCACCATTGGCATCAGCGATTTTAG TTTACGACAGCGCTCAATTTTTCATGCAGTCGCCGAAATCATCTCCCAACATAAAGAACAACCAACTCTCATAGCCATGA ACTCTAAAGCTTGGGGTCATGTTTTGCGTTTAGCATATTACGCACCTGCAAAAGCCCCAGTGATGTTATTAGCTGAACAT CCTGCGGATTTAGCAACTTCACTGGAAAATGTGTTAAAAAATGAAACCCAAAAATATCCCCGGATTCTTTGGTTAGAAAG TGCAAATCCTGTATGGTCGAAATTAAAAACACCAGCGCAGATAGAAATAGAACATCAGAAGGTACAGAAAATTTTATCAA AGCAGTTTCAACTAACAAAAACTCAAAATCTCACGGGTACGATGAACTTAGATAGTTTTACCCTTAAAGTTTACAAGCGT TCTGCCAATAGTTGA
Upstream 100 bases:
>100_bases TACTTATGATAATCGCAAAGACATATTTAACACAAATATTACAGTAGTCTGTGAATATTCTTGGTATCATCAGGACAGCA ACATATAAGCAAATATATTG
Downstream 100 bases:
>100_bases AATTTACAGAATATACTCAGCAAAAACTGAATCAAATATTTAAATTGTGTGGTTAACATATTTCTCAATGGCATTGATGG AATAATCGTCATATTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MNPGVPVTKLNKLVSLETLALVAIAIAVLLRIVNLGSREFWYDEVLSLLLATGQKSAYQTPKDIPVALAEYLPLLSLPVE SGFSAVISTVKELLLSLLGGEPHPPLFYLSQHFWLRLFGNSEAVMRSLNTLFSIGAIASAYSLGKVFIGHRGGLLLAAFL GINPFYLFHSLNVRMYAPLVLWTTLSAASLFHLIHQPTDSKANHNCRHKLWWNILFIGSIAAGLLTFYFYLYWVIALAVL VLYLDRQHWWQHGLRLGAGVMLTVPWMLWGGIKQIRSADLNRFGNLKNTGSAILTHLQDTTQTLASNLVLGDWITSLPTI SIVIVGCLAIALIIASSLKLWRQGERKNLTVALILGILPLLIALGLDIVTKKTTLNFGGGRTMIIILPGCLLLLTLWLEK AFSSQWRTLVVSGLLLLYLTIGISDFSLRQRSIFHAVAEIISQHKEQPTLIAMNSKAWGHVLRLAYYAPAKAPVMLLAEH PADLATSLENVLKNETQKYPRILWLESANPVWSKLKTPAQIEIEHQKVQKILSKQFQLTKTQNLTGTMNLDSFTLKVYKR SANS
Sequences:
>Translated_564_residues MNPGVPVTKLNKLVSLETLALVAIAIAVLLRIVNLGSREFWYDEVLSLLLATGQKSAYQTPKDIPVALAEYLPLLSLPVE SGFSAVISTVKELLLSLLGGEPHPPLFYLSQHFWLRLFGNSEAVMRSLNTLFSIGAIASAYSLGKVFIGHRGGLLLAAFL GINPFYLFHSLNVRMYAPLVLWTTLSAASLFHLIHQPTDSKANHNCRHKLWWNILFIGSIAAGLLTFYFYLYWVIALAVL VLYLDRQHWWQHGLRLGAGVMLTVPWMLWGGIKQIRSADLNRFGNLKNTGSAILTHLQDTTQTLASNLVLGDWITSLPTI SIVIVGCLAIALIIASSLKLWRQGERKNLTVALILGILPLLIALGLDIVTKKTTLNFGGGRTMIIILPGCLLLLTLWLEK AFSSQWRTLVVSGLLLLYLTIGISDFSLRQRSIFHAVAEIISQHKEQPTLIAMNSKAWGHVLRLAYYAPAKAPVMLLAEH PADLATSLENVLKNETQKYPRILWLESANPVWSKLKTPAQIEIEHQKVQKILSKQFQLTKTQNLTGTMNLDSFTLKVYKR SANS >Mature_564_residues MNPGVPVTKLNKLVSLETLALVAIAIAVLLRIVNLGSREFWYDEVLSLLLATGQKSAYQTPKDIPVALAEYLPLLSLPVE SGFSAVISTVKELLLSLLGGEPHPPLFYLSQHFWLRLFGNSEAVMRSLNTLFSIGAIASAYSLGKVFIGHRGGLLLAAFL GINPFYLFHSLNVRMYAPLVLWTTLSAASLFHLIHQPTDSKANHNCRHKLWWNILFIGSIAAGLLTFYFYLYWVIALAVL VLYLDRQHWWQHGLRLGAGVMLTVPWMLWGGIKQIRSADLNRFGNLKNTGSAILTHLQDTTQTLASNLVLGDWITSLPTI SIVIVGCLAIALIIASSLKLWRQGERKNLTVALILGILPLLIALGLDIVTKKTTLNFGGGRTMIIILPGCLLLLTLWLEK AFSSQWRTLVVSGLLLLYLTIGISDFSLRQRSIFHAVAEIISQHKEQPTLIAMNSKAWGHVLRLAYYAPAKAPVMLLAEH PADLATSLENVLKNETQKYPRILWLESANPVWSKLKTPAQIEIEHQKVQKILSKQFQLTKTQNLTGTMNLDSFTLKVYKR SANS
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62734; Mature: 62734
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPGVPVTKLNKLVSLETLALVAIAIAVLLRIVNLGSREFWYDEVLSLLLATGQKSAYQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC PKDIPVALAEYLPLLSLPVESGFSAVISTVKELLLSLLGGEPHPPLFYLSQHFWLRLFGN CCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEECC SEAVMRSLNTLFSIGAIASAYSLGKVFIGHRGGLLLAAFLGINPFYLFHSLNVRMYAPLV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEECCHHHHHHHH LWTTLSAASLFHLIHQPTDSKANHNCRHKLWWNILFIGSIAAGLLTFYFYLYWVIALAVL HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLYLDRQHWWQHGLRLGAGVMLTVPWMLWGGIKQIRSADLNRFGNLKNTGSAILTHLQDT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TQTLASNLVLGDWITSLPTISIVIVGCLAIALIIASSLKLWRQGERKNLTVALILGILPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LIALGLDIVTKKTTLNFGGGRTMIIILPGCLLLLTLWLEKAFSSQWRTLVVSGLLLLYLT HHHCCCHHEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGISDFSLRQRSIFHAVAEIISQHKEQPTLIAMNSKAWGHVLRLAYYAPAKAPVMLLAEH HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECC PADLATSLENVLKNETQKYPRILWLESANPVWSKLKTPAQIEIEHQKVQKILSKQFQLTK CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH TQNLTGTMNLDSFTLKVYKRSANS CCCCEEEECCCHHHHHHHHCCCCC >Mature Secondary Structure MNPGVPVTKLNKLVSLETLALVAIAIAVLLRIVNLGSREFWYDEVLSLLLATGQKSAYQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC PKDIPVALAEYLPLLSLPVESGFSAVISTVKELLLSLLGGEPHPPLFYLSQHFWLRLFGN CCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEECC SEAVMRSLNTLFSIGAIASAYSLGKVFIGHRGGLLLAAFLGINPFYLFHSLNVRMYAPLV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEECCHHHHHHHH LWTTLSAASLFHLIHQPTDSKANHNCRHKLWWNILFIGSIAAGLLTFYFYLYWVIALAVL HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLYLDRQHWWQHGLRLGAGVMLTVPWMLWGGIKQIRSADLNRFGNLKNTGSAILTHLQDT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TQTLASNLVLGDWITSLPTISIVIVGCLAIALIIASSLKLWRQGERKNLTVALILGILPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LIALGLDIVTKKTTLNFGGGRTMIIILPGCLLLLTLWLEKAFSSQWRTLVVSGLLLLYLT HHHCCCHHEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGISDFSLRQRSIFHAVAEIISQHKEQPTLIAMNSKAWGHVLRLAYYAPAKAPVMLLAEH HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECC PADLATSLENVLKNETQKYPRILWLESANPVWSKLKTPAQIEIEHQKVQKILSKQFQLTK CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH TQNLTGTMNLDSFTLKVYKRSANS CCCCEEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA