| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231605
Identifier: 17231605
GI number: 17231605
Start: 4956600
End: 4957184
Strand: Reverse
Name: 17231605
Synonym: all4113
Alternate gene names: NA
Gene position: 4957184-4956600 (Counterclockwise)
Preceding gene: 17231608
Following gene: 17231602
Centisome position: 77.29
GC content: 47.69
Gene sequence:
>585_bases ATGGAAGCGGAATCAGAAATGCGCTCGTCACCTACTGTAGGGGGAGCGCCTACCCTCTACGGAATTGCCAATACAATTCG TCTCACAGGCTGGATTACTCTTTGGGTACAACTGGGACTGGCTGTGGTTGCTGGTTTAGCTTTACTTTTCGCCTCCACTG GCCGCGGCTTTGCAGAGCAACCAAACGCAGGACTGGGAATTGGCATATTTTGGGCTGTCTGCGGTGTTATAGCTTTATTG TTTAGTGTGTATTGGGATTTTCGTTACACCCGCATCGGTAAGCATTTAGCAAATCCCAATCCGGCTTTACACCCCAGCAA GGCAGATACAACTCAAGCGATTCGGTTAGGAATAATAGTAAGTTTAGTGGGAATACTACTAACCCTCATAGGTGCTGGTG CAACCTTGGGTGTACTCATTGCAAAATCTATTTCCCAACCACCAGGGGTAGCCATTACTGACCCCAACAAAATTATCAGG GCGCTGGATGTGTTTGTGATGGTAGGGAATATCAATGGTATTGCGGCCCATTTTGTGGGGGCGATCGCTTCAATTTGGCT ACTGGAGAGAGTACATCAGCATTAA
Upstream 100 bases:
>100_bases TTATGTCTCCTGGGTGGAGGGGTGTTCTGTCTGTGGGTGGGCGTTTGTGTACAAGAGGGGAAATATCGTAGTGATTGGGG CATAAGCAAAGGAAATTGAT
Downstream 100 bases:
>100_bases TGATGATTTGAATTTGTTTCTTTTTCCCCTACCAATTCCAGACACAACTCCCGAAAATGATCGCCCCGTGCTTCAAAATT GGGGTATTGGTCGAAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEAESEMRSSPTVGGAPTLYGIANTIRLTGWITLWVQLGLAVVAGLALLFASTGRGFAEQPNAGLGIGIFWAVCGVIALL FSVYWDFRYTRIGKHLANPNPALHPSKADTTQAIRLGIIVSLVGILLTLIGAGATLGVLIAKSISQPPGVAITDPNKIIR ALDVFVMVGNINGIAAHFVGAIASIWLLERVHQH
Sequences:
>Translated_194_residues MEAESEMRSSPTVGGAPTLYGIANTIRLTGWITLWVQLGLAVVAGLALLFASTGRGFAEQPNAGLGIGIFWAVCGVIALL FSVYWDFRYTRIGKHLANPNPALHPSKADTTQAIRLGIIVSLVGILLTLIGAGATLGVLIAKSISQPPGVAITDPNKIIR ALDVFVMVGNINGIAAHFVGAIASIWLLERVHQH >Mature_194_residues MEAESEMRSSPTVGGAPTLYGIANTIRLTGWITLWVQLGLAVVAGLALLFASTGRGFAEQPNAGLGIGIFWAVCGVIALL FSVYWDFRYTRIGKHLANPNPALHPSKADTTQAIRLGIIVSLVGILLTLIGAGATLGVLIAKSISQPPGVAITDPNKIIR ALDVFVMVGNINGIAAHFVGAIASIWLLERVHQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20443; Mature: 20443
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAESEMRSSPTVGGAPTLYGIANTIRLTGWITLWVQLGLAVVAGLALLFASTGRGFAEQ CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PNAGLGIGIFWAVCGVIALLFSVYWDFRYTRIGKHLANPNPALHPSKADTTQAIRLGIIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH SLVGILLTLIGAGATLGVLIAKSISQPPGVAITDPNKIIRALDVFVMVGNINGIAAHFVG HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHH AIASIWLLERVHQH HHHHHHHHHHHHCC >Mature Secondary Structure MEAESEMRSSPTVGGAPTLYGIANTIRLTGWITLWVQLGLAVVAGLALLFASTGRGFAEQ CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PNAGLGIGIFWAVCGVIALLFSVYWDFRYTRIGKHLANPNPALHPSKADTTQAIRLGIIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH SLVGILLTLIGAGATLGVLIAKSISQPPGVAITDPNKIIRALDVFVMVGNINGIAAHFVG HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHH AIASIWLLERVHQH HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA