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The map label for this gene is ddpX [H]

Identifier: 17231608

GI number: 17231608

Start: 4958569

End: 4959273

Strand: Reverse

Name: ddpX [H]

Synonym: all4116

Alternate gene names: 17231608

Gene position: 4959273-4958569 (Counterclockwise)

Preceding gene: 17231609

Following gene: 17231605

Centisome position: 77.32

GC content: 44.68

Gene sequence:

>705_bases
GTGATTAATTACCAGATCAGACCTTATCATCAAATACTTATTGTGGAATGTGGTGAACCGCTAGTAGAGATTCCTTTAGA
ATTATTTTCCTGGGAGTCTCCCCATCCTTATGCAAGATTAGGGGCTGCTTACGGAGAATATTCACCTTATTTTTTGCGTC
AGAGTGTTGTTAACTGTTTAATAAAAGCTCAAAGTTATTTAGAGTCGCTGCGTCCTCGCTGGCGCATCCAAATTTTTGAT
GCCTATCGTCCAGTAGCTGTGCAGCAGTTTATGGTAGATTACAGCTTCGCTATGGCAGTTGAGGAACGAGGGTTAATTGA
GGCTGAATTAACGCCGCAGCAACGCCAAGAAATTTGGCAAGCGGTTTATGAAATTTGGGCTGTACCGAGTTTGGATGAAA
AAACTCCTCCACCCCACAGTACCGGTGCAGCAGTAGACGTGACTTTAGTAGATGATGGCGGACAGGTTGTAAACATGGGT
TCGCCGATTGATGAATTGTCAGAGCGATCGCATCCCGATTACTATGCCAATAGTAAAGAACCAGCAGCGCCGGAGTATCA
CGCTCATCGTCAATTGTTGTGTGATGTCATGTTAAAAGCTAGTTTCCAACGTAATCCGAAGGAGTGGTGGCATTTTTGCT
ACGGTGATCAAATGTGGGCTTGGTTGAGTAATCAGCCTACCGCCATTTATGGACGTGTGCCATAG

Upstream 100 bases:

>100_bases
CCTATGTCTTTGTGCAAACCCTTGATTTTTCATTTTCATGGGTAAATCCTACTTAAAAAAAGGTAAATTCTAGGTTTAGT
TAAATCTAAATCTACTGAGA

Downstream 100 bases:

>100_bases
TTCTGAGTTTAAGCGTCTTCAGGATTGAGTTGCCTTAGTTCGTCGGTGGTATATGTACCGATGGGACTCCATAGTAGATA
GGGAATCAATAATACAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MINYQIRPYHQILIVECGEPLVEIPLELFSWESPHPYARLGAAYGEYSPYFLRQSVVNCLIKAQSYLESLRPRWRIQIFD
AYRPVAVQQFMVDYSFAMAVEERGLIEAELTPQQRQEIWQAVYEIWAVPSLDEKTPPPHSTGAAVDVTLVDDGGQVVNMG
SPIDELSERSHPDYYANSKEPAAPEYHAHRQLLCDVMLKASFQRNPKEWWHFCYGDQMWAWLSNQPTAIYGRVP

Sequences:

>Translated_234_residues
MINYQIRPYHQILIVECGEPLVEIPLELFSWESPHPYARLGAAYGEYSPYFLRQSVVNCLIKAQSYLESLRPRWRIQIFD
AYRPVAVQQFMVDYSFAMAVEERGLIEAELTPQQRQEIWQAVYEIWAVPSLDEKTPPPHSTGAAVDVTLVDDGGQVVNMG
SPIDELSERSHPDYYANSKEPAAPEYHAHRQLLCDVMLKASFQRNPKEWWHFCYGDQMWAWLSNQPTAIYGRVP
>Mature_234_residues
MINYQIRPYHQILIVECGEPLVEIPLELFSWESPHPYARLGAAYGEYSPYFLRQSVVNCLIKAQSYLESLRPRWRIQIFD
AYRPVAVQQFMVDYSFAMAVEERGLIEAELTPQQRQEIWQAVYEIWAVPSLDEKTPPPHSTGAAVDVTLVDDGGQVVNMG
SPIDELSERSHPDYYANSKEPAAPEYHAHRQLLCDVMLKASFQRNPKEWWHFCYGDQMWAWLSNQPTAIYGRVP

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=102, Percent_Identity=40.1960784313725, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 27095; Mature: 27095

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYQIRPYHQILIVECGEPLVEIPLELFSWESPHPYARLGAAYGEYSPYFLRQSVVNCL
CCCCCCCCCEEEEEEECCCCHHHCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
IKAQSYLESLRPRWRIQIFDAYRPVAVQQFMVDYSFAMAVEERGLIEAELTPQQRQEIWQ
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
AVYEIWAVPSLDEKTPPPHSTGAAVDVTLVDDGGQVVNMGSPIDELSERSHPDYYANSKE
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCCCC
PAAPEYHAHRQLLCDVMLKASFQRNPKEWWHFCYGDQMWAWLSNQPTAIYGRVP
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEECCC
>Mature Secondary Structure
MINYQIRPYHQILIVECGEPLVEIPLELFSWESPHPYARLGAAYGEYSPYFLRQSVVNCL
CCCCCCCCCEEEEEEECCCCHHHCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
IKAQSYLESLRPRWRIQIFDAYRPVAVQQFMVDYSFAMAVEERGLIEAELTPQQRQEIWQ
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
AVYEIWAVPSLDEKTPPPHSTGAAVDVTLVDDGGQVVNMGSPIDELSERSHPDYYANSKE
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCCCC
PAAPEYHAHRQLLCDVMLKASFQRNPKEWWHFCYGDQMWAWLSNQPTAIYGRVP
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]