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The map label for this gene is ycfF [C]

Identifier: 17231579

GI number: 17231579

Start: 4925465

End: 4925833

Strand: Reverse

Name: ycfF [C]

Synonym: all4087

Alternate gene names: 17231579

Gene position: 4925833-4925465 (Counterclockwise)

Preceding gene: 17231581

Following gene: 17231577

Centisome position: 76.8

GC content: 43.9

Gene sequence:

>369_bases
ATGAGTTCTGATAACCGCATGAGTGAAACCACAGAGACCATTTTCAGCAAAATTATTCGTCGAGAAATTCCCGCTAACAT
CGTCTATGAAGACGATTTAGCTCTAGCCTTTAAAGATGTGCATCCCCAAGCACCAGTACATATTCTGGTCATTCCTAAAC
AACCTCTTGCCAAACTTTCTGATGCAGATTCTCATGATCACGCTCTTTTGGGACATCTTTTGTTAACTGCCAAACGTGTT
GCCCAAGAAGCAGGACTGGAAAATGGCTATCGCGTTGTCATCAATAATGGCAATGATGGAGGGCAAACAGTTTACCACCT
GCATTTACATATTTTAGGTGGGCGACCAATGGCATGGCCGCCTGGTTGA

Upstream 100 bases:

>100_bases
TTTCACGGCATCGATGCCGACAATTGATGCACTCCAGACTCTAGCAAGCATTGGCTAAATATTTCTTAGATGGACAGTAA
CCCTTTAGAATCTCTAGCAG

Downstream 100 bases:

>100_bases
TATAAAGTCATTAATCGCGTCTAGTGACGCGATTAATAGATAAAAATTTAGCGCTAAGTGACTTAAATACTATGTAAAAA
ATACGTTGGATTAAAGGAGT

Product: protein kinase C inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSSDNRMSETTETIFSKIIRREIPANIVYEDDLALAFKDVHPQAPVHILVIPKQPLAKLSDADSHDHALLGHLLLTAKRV
AQEAGLENGYRVVINNGNDGGQTVYHLHLHILGGRPMAWPPG

Sequences:

>Translated_122_residues
MSSDNRMSETTETIFSKIIRREIPANIVYEDDLALAFKDVHPQAPVHILVIPKQPLAKLSDADSHDHALLGHLLLTAKRV
AQEAGLENGYRVVINNGNDGGQTVYHLHLHILGGRPMAWPPG
>Mature_121_residues
SSDNRMSETTETIFSKIIRREIPANIVYEDDLALAFKDVHPQAPVHILVIPKQPLAKLSDADSHDHALLGHLLLTAKRVA
QEAGLENGYRVVINNGNDGGQTVYHLHLHILGGRPMAWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=59.4594594594595, Blast_Score=153, Evalue=3e-38,
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=59.0909090909091, Blast_Score=148, Evalue=1e-36,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=50.9259259259259, Blast_Score=115, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17506713, Length=122, Percent_Identity=56.5573770491803, Blast_Score=157, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6320078, Length=114, Percent_Identity=36.8421052631579, Blast_Score=64, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574010, Length=126, Percent_Identity=57.9365079365079, Blast_Score=157, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24581222, Length=126, Percent_Identity=57.9365079365079, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13446; Mature: 13314

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDNRMSETTETIFSKIIRREIPANIVYEDDLALAFKDVHPQAPVHILVIPKQPLAKLS
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCHHHCC
DADSHDHALLGHLLLTAKRVAQEAGLENGYRVVINNGNDGGQTVYHLHLHILGGRPMAWP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC
PG
CC
>Mature Secondary Structure 
SSDNRMSETTETIFSKIIRREIPANIVYEDDLALAFKDVHPQAPVHILVIPKQPLAKLS
CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCHHHCC
DADSHDHALLGHLLLTAKRVAQEAGLENGYRVVINNGNDGGQTVYHLHLHILGGRPMAWP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC
PG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]