| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231581
Identifier: 17231581
GI number: 17231581
Start: 4927444
End: 4928220
Strand: Reverse
Name: 17231581
Synonym: all4089
Alternate gene names: NA
Gene position: 4928220-4927444 (Counterclockwise)
Preceding gene: 17231582
Following gene: 17231579
Centisome position: 76.84
GC content: 39.12
Gene sequence:
>777_bases ATGTCAATTATTGCGCTCAGAGCATGGTATCTTCAGGATTATGAGCCAATTTCTGAAATAGAAAAACGGCCACCAGATAT TCGTCTTAGTAAAAAAAGCTTGCTGAGATCGGCATTGCGCGCAGACTTTTTAGAAGATAGTGATGCAGTTAAACATTCAA TTTGGTTTGGGCGGTATCTGGAGGGGGAAAATGTAGAATTTTATGTTGAAGGTAGCGGTAGCTACTGTGTAGCTAATATT GACTTAATTAGCCATGAAATTTATTTTATCAAGCAGACAGTTTTAGCTCAGTTAGAACCAACGATTTTCTTTTCCTATCA GACTGAATACGCCGACGCTAGTGATCTTCTCAGGGAAGGACTGGGAAAGAGTGTAGAAACATTAAACTTGCGATCGCGTA TCCCACTGACATTAGTAGAATCATCTCGCCCCAAAGACGCGCCGTTACGTTTAAATCGCACCATTCTGAGAAAATTACGT AAAAGTTTGTTGTTTATTGCAGACACTACACCCATCGCTAGCATTGATAGTAAAGAAGCACAACAATTCATTCCTAGTCC TAATGTTTGTGTAGAAATTGGCTATGCTATTCAAAGCAAGCGCACAGAACAAATCTTGTTAGCACATCTGCAACGTCCAG ATTATCAAGGAGAAGGAAAATTTCCTTTTGACCTACCCACACAACAAATCTTGCCATTTCGAGACAGCAAAGAACTCAAT AAAATTCTCACAGGAGCCATTGAAAGCCAGTTAACAAGATATAAATTGTTCTTTTGA
Upstream 100 bases:
>100_bases TGTTTGTAAACACTTAGTAAATATTAGAGAAATATTCAAAACCCCGTGTAAACTTATACGCAATACAACAAACCCTTTAG AAAACTAAACATAGCGCCTT
Downstream 100 bases:
>100_bases CTTCCCTGATAATTCAGTAATCACTTAGCTATCACTGCATTCTGTCTATAGTCCGATACTGAATTGCTTCTGCTACATGA TTAGGTTTTAGCTCGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSIIALRAWYLQDYEPISEIEKRPPDIRLSKKSLLRSALRADFLEDSDAVKHSIWFGRYLEGENVEFYVEGSGSYCVANI DLISHEIYFIKQTVLAQLEPTIFFSYQTEYADASDLLREGLGKSVETLNLRSRIPLTLVESSRPKDAPLRLNRTILRKLR KSLLFIADTTPIASIDSKEAQQFIPSPNVCVEIGYAIQSKRTEQILLAHLQRPDYQGEGKFPFDLPTQQILPFRDSKELN KILTGAIESQLTRYKLFF
Sequences:
>Translated_258_residues MSIIALRAWYLQDYEPISEIEKRPPDIRLSKKSLLRSALRADFLEDSDAVKHSIWFGRYLEGENVEFYVEGSGSYCVANI DLISHEIYFIKQTVLAQLEPTIFFSYQTEYADASDLLREGLGKSVETLNLRSRIPLTLVESSRPKDAPLRLNRTILRKLR KSLLFIADTTPIASIDSKEAQQFIPSPNVCVEIGYAIQSKRTEQILLAHLQRPDYQGEGKFPFDLPTQQILPFRDSKELN KILTGAIESQLTRYKLFF >Mature_257_residues SIIALRAWYLQDYEPISEIEKRPPDIRLSKKSLLRSALRADFLEDSDAVKHSIWFGRYLEGENVEFYVEGSGSYCVANID LISHEIYFIKQTVLAQLEPTIFFSYQTEYADASDLLREGLGKSVETLNLRSRIPLTLVESSRPKDAPLRLNRTILRKLRK SLLFIADTTPIASIDSKEAQQFIPSPNVCVEIGYAIQSKRTEQILLAHLQRPDYQGEGKFPFDLPTQQILPFRDSKELNK ILTGAIESQLTRYKLFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29638; Mature: 29507
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIALRAWYLQDYEPISEIEKRPPDIRLSKKSLLRSALRADFLEDSDAVKHSIWFGRYL CCEEEEEHHHHCCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHEEE EGENVEFYVEGSGSYCVANIDLISHEIYFIKQTVLAQLEPTIFFSYQTEYADASDLLREG CCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH LGKSVETLNLRSRIPLTLVESSRPKDAPLRLNRTILRKLRKSLLFIADTTPIASIDSKEA CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCHHH QQFIPSPNVCVEIGYAIQSKRTEQILLAHLQRPDYQGEGKFPFDLPTQQILPFRDSKELN HHHCCCCCCEEEECHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH KILTGAIESQLTRYKLFF HHHHHHHHHHHHHEEECC >Mature Secondary Structure SIIALRAWYLQDYEPISEIEKRPPDIRLSKKSLLRSALRADFLEDSDAVKHSIWFGRYL CEEEEEHHHHCCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHEEE EGENVEFYVEGSGSYCVANIDLISHEIYFIKQTVLAQLEPTIFFSYQTEYADASDLLREG CCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH LGKSVETLNLRSRIPLTLVESSRPKDAPLRLNRTILRKLRKSLLFIADTTPIASIDSKEA CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCHHH QQFIPSPNVCVEIGYAIQSKRTEQILLAHLQRPDYQGEGKFPFDLPTQQILPFRDSKELN HHHCCCCCCEEEECHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH KILTGAIESQLTRYKLFF HHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA