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The map label for this gene is yoaA [C]

Identifier: 17231567

GI number: 17231567

Start: 4905053

End: 4906609

Strand: Direct

Name: yoaA [C]

Synonym: alr4075

Alternate gene names: 17231567

Gene position: 4905053-4906609 (Clockwise)

Preceding gene: 17231564

Following gene: 17231568

Centisome position: 76.48

GC content: 46.44

Gene sequence:

>1557_bases
GTGATTGAGGCAGAAGTTCATTTGTCATTACATAACTTTTTGCGATCGCAGGCGGGTTTCCCTTCCTGGCCCCATCATTT
AACGATGGCACGGTTGGTAGCACGCGCCTTGCGTCTGGGACGTAGCGCCTTAATTCAAGTAGGGGCTGTTTGTGGCTATC
AAGGACGGTATCGCACAAGTTTTATTGCCTCTGCTCTGATGTGGCACGGCCCTGTAATTATTGTTGCCACAGAAACAGTG
CAACAACTACTGCTGCGAGTGGAAATTCCTCGTTTACAGCAATGGCTACAAGTTAATAAACCAATCAGAACAGGTGACGC
TTGGCCTAACCCTGAGTTCCAAGGAATACTTCTGACTTCCCCAGAAGCTTGGCTAAGAGGACAGCTAACATCTGCTGATA
ATTTCCCCCAAGGTATACCCACCATTATTGATGGAGTCGATGATTTAGAAGATTGGGTACGTCATCAGCTGACTCAAGAT
ATTCAACCCCAAGACTGGGATCAACTTATACTAGCCTGCCCGGAACAAGCTGAGACAATCCGATTGGCAAGGATTGAATT
GACAAGTGAACTGTTCAAACATCCAGCAAATCCCTACGAGTGCTATTTAATTTCCCCATCAGAAACTGATATTTTAACCA
AACTCCACACAGCTTTAAAATCAGCATCAGGTGTGCCAGAAGTATGGCAGAAATTCTGGCAACAATTACCCAGCGAGCAA
AATCATCCCCCCTCATCCTCCCCACCCCTCTTCTGGGCAACGATCGCCCGTCGCCAAGGTTTATTCTCGTTGCATTACGC
ACCAATCGAATTAGGAGACATTCTCTCACCTATTTGGCAACGTCAGCCAGTAGTCCTAATTGGCAGCGCTTTAGAGCCAG
AAACCGAGGCTCCTTTGTTTCAAGAGCGTTTGGGTTTAGATGATTTAACCTGCTTAAAATTCGCTTCTGATAGCCAATCA
GAGGCAATTCAACTCTACATACCTTACAAGCTACCTCTACCTAATACGCCAGAGTTTCAAGCCGCATTCATTCACAAGGT
GCGGACTTTAGTCTGTCTAAGTGCTACTGCACCAGGATTGACAGTGTTGCTTGTGGGAGATGTGCCATTAAAGGCTCAGG
TGGGAGCAATTTTAGCCTCAGAGTTTGGTTCGCGGGTGCAGGTAGAAAAAACCTGTTTGGATGAAAATGGCATTTTGGTT
AGCGGTTGGGAATTTTGGCGAGAACATCAGGCTGTCTTACCTGCGCCTCAACTGTTAGTGATTGCGACTTTACCCTTACC
ATCTTTAGAACACCCCCTAGTGGCTGGTAGAGTAGCTCACTATAAGCGATCGCATCAAGACTGGTTTCGTTTATTTTTAT
TACCAACTGCTTTAAATGAACTACAAAGAGCCGTAGCCCCTGTGCGTGAAAATCAAGGCATTGTCGCTTTACTCGATAGT
CGTGTCGTCAATCGTAGTTACGGCTCCCAAATCCTCAATGTCCTCAGCCCTCTAGCACGCCTTAACTATCTCGATCCAAG
TCTGTTTGCCCCCAGTGGTGAAGAAAATTCAGCGTAG

Upstream 100 bases:

>100_bases
TATGAATGCAACTGACAACTGACAACCAACAACTGACAAAAGAGATAATAGAAATGGGGCTATTGGCAATTAAAGTCATT
TTGTATGGGATGGAAAGCGT

Downstream 100 bases:

>100_bases
TGTGAGTATGAGGAAGATAATTGATGTACAGACGTTACACTGCAACGCCTCTAATAACTAATGACCATAAGTATTAAAGT
AAATTTATAGCCTAAACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Rad3-Related DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; DNA Polymerase III Subunit Epsilon; ATP-Dependent Helicase; Rad3-Like DNA Helicase-Like Protein; DNA Polymerase III Epsilon Subunit; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MIEAEVHLSLHNFLRSQAGFPSWPHHLTMARLVARALRLGRSALIQVGAVCGYQGRYRTSFIASALMWHGPVIIVATETV
QQLLLRVEIPRLQQWLQVNKPIRTGDAWPNPEFQGILLTSPEAWLRGQLTSADNFPQGIPTIIDGVDDLEDWVRHQLTQD
IQPQDWDQLILACPEQAETIRLARIELTSELFKHPANPYECYLISPSETDILTKLHTALKSASGVPEVWQKFWQQLPSEQ
NHPPSSSPPLFWATIARRQGLFSLHYAPIELGDILSPIWQRQPVVLIGSALEPETEAPLFQERLGLDDLTCLKFASDSQS
EAIQLYIPYKLPLPNTPEFQAAFIHKVRTLVCLSATAPGLTVLLVGDVPLKAQVGAILASEFGSRVQVEKTCLDENGILV
SGWEFWREHQAVLPAPQLLVIATLPLPSLEHPLVAGRVAHYKRSHQDWFRLFLLPTALNELQRAVAPVRENQGIVALLDS
RVVNRSYGSQILNVLSPLARLNYLDPSLFAPSGEENSA

Sequences:

>Translated_518_residues
MIEAEVHLSLHNFLRSQAGFPSWPHHLTMARLVARALRLGRSALIQVGAVCGYQGRYRTSFIASALMWHGPVIIVATETV
QQLLLRVEIPRLQQWLQVNKPIRTGDAWPNPEFQGILLTSPEAWLRGQLTSADNFPQGIPTIIDGVDDLEDWVRHQLTQD
IQPQDWDQLILACPEQAETIRLARIELTSELFKHPANPYECYLISPSETDILTKLHTALKSASGVPEVWQKFWQQLPSEQ
NHPPSSSPPLFWATIARRQGLFSLHYAPIELGDILSPIWQRQPVVLIGSALEPETEAPLFQERLGLDDLTCLKFASDSQS
EAIQLYIPYKLPLPNTPEFQAAFIHKVRTLVCLSATAPGLTVLLVGDVPLKAQVGAILASEFGSRVQVEKTCLDENGILV
SGWEFWREHQAVLPAPQLLVIATLPLPSLEHPLVAGRVAHYKRSHQDWFRLFLLPTALNELQRAVAPVRENQGIVALLDS
RVVNRSYGSQILNVLSPLARLNYLDPSLFAPSGEENSA
>Mature_518_residues
MIEAEVHLSLHNFLRSQAGFPSWPHHLTMARLVARALRLGRSALIQVGAVCGYQGRYRTSFIASALMWHGPVIIVATETV
QQLLLRVEIPRLQQWLQVNKPIRTGDAWPNPEFQGILLTSPEAWLRGQLTSADNFPQGIPTIIDGVDDLEDWVRHQLTQD
IQPQDWDQLILACPEQAETIRLARIELTSELFKHPANPYECYLISPSETDILTKLHTALKSASGVPEVWQKFWQQLPSEQ
NHPPSSSPPLFWATIARRQGLFSLHYAPIELGDILSPIWQRQPVVLIGSALEPETEAPLFQERLGLDDLTCLKFASDSQS
EAIQLYIPYKLPLPNTPEFQAAFIHKVRTLVCLSATAPGLTVLLVGDVPLKAQVGAILASEFGSRVQVEKTCLDENGILV
SGWEFWREHQAVLPAPQLLVIATLPLPSLEHPLVAGRVAHYKRSHQDWFRLFLLPTALNELQRAVAPVRENQGIVALLDS
RVVNRSYGSQILNVLSPLARLNYLDPSLFAPSGEENSA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57905; Mature: 57905

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAEVHLSLHNFLRSQAGFPSWPHHLTMARLVARALRLGRSALIQVGAVCGYQGRYRTS
CCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH
FIASALMWHGPVIIVATETVQQLLLRVEIPRLQQWLQVNKPIRTGDAWPNPEFQGILLTS
HHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
PEAWLRGQLTSADNFPQGIPTIIDGVDDLEDWVRHQLTQDIQPQDWDQLILACPEQAETI
CHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHE
RLARIELTSELFKHPANPYECYLISPSETDILTKLHTALKSASGVPEVWQKFWQQLPSEQ
EHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
NHPPSSSPPLFWATIARRQGLFSLHYAPIELGDILSPIWQRQPVVLIGSALEPETEAPLF
CCCCCCCCCEEHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
QERLGLDDLTCLKFASDSQSEAIQLYIPYKLPLPNTPEFQAAFIHKVRTLVCLSATAPGL
HHHCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCE
TVLLVGDVPLKAQVGAILASEFGSRVQVEKTCLDENGILVSGWEFWREHQAVLPAPQLLV
EEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEECHHHHHHCCCCCCCCCEEE
IATLPLPSLEHPLVAGRVAHYKRSHQDWFRLFLLPTALNELQRAVAPVRENQGIVALLDS
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
RVVNRSYGSQILNVLSPLARLNYLDPSLFAPSGEENSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEAEVHLSLHNFLRSQAGFPSWPHHLTMARLVARALRLGRSALIQVGAVCGYQGRYRTS
CCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH
FIASALMWHGPVIIVATETVQQLLLRVEIPRLQQWLQVNKPIRTGDAWPNPEFQGILLTS
HHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
PEAWLRGQLTSADNFPQGIPTIIDGVDDLEDWVRHQLTQDIQPQDWDQLILACPEQAETI
CHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHE
RLARIELTSELFKHPANPYECYLISPSETDILTKLHTALKSASGVPEVWQKFWQQLPSEQ
EHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
NHPPSSSPPLFWATIARRQGLFSLHYAPIELGDILSPIWQRQPVVLIGSALEPETEAPLF
CCCCCCCCCEEHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
QERLGLDDLTCLKFASDSQSEAIQLYIPYKLPLPNTPEFQAAFIHKVRTLVCLSATAPGL
HHHCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCE
TVLLVGDVPLKAQVGAILASEFGSRVQVEKTCLDENGILVSGWEFWREHQAVLPAPQLLV
EEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEECHHHHHHCCCCCCCCCEEE
IATLPLPSLEHPLVAGRVAHYKRSHQDWFRLFLLPTALNELQRAVAPVRENQGIVALLDS
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
RVVNRSYGSQILNVLSPLARLNYLDPSLFAPSGEENSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA