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The map label for this gene is yadT [C]

Identifier: 17231523

GI number: 17231523

Start: 4856203

End: 4857483

Strand: Direct

Name: yadT [C]

Synonym: alr4031

Alternate gene names: 17231523

Gene position: 4856203-4857483 (Clockwise)

Preceding gene: 17231522

Following gene: 17231524

Centisome position: 75.72

GC content: 36.85

Gene sequence:

>1281_bases
ATGCGCCTACTCTTCTCATTCTCCTGTCGGAGACGCTGGCGCGAACGAGAACGACTTCGTCGAATGCGTGAGATAAAAAT
GATAAAACTCCCACACAAAAAACCAATCATTTTCTTCTGTCAATTATTCCTCATAGCCACCCTCATCATCGCTTGTCATC
AGACCACAATTCACACATCAACTAATACCTGCACCCCCAACTATAACCCCAATCAAGATTACTTTCCCAATAAAATCAAA
ATCACCCACGCCAGAGGTTTGGCGGTAGAATATCACAAACATTACAAAGTAGTCACTATTAAAAACCCTTGGCAAAATGC
CAAAACTCAGTTTCAATATGTTTTAGTCCAATGCGGAACTCCCACACCCCAAGGATTTAAGCAGGCGCAAGTAATTACAG
TTCCCATTCACTCTATAGTTTCTCTATCAACTACACATCTACCCCACCTAGCCAAATTAGGCGTAGTTGATAAACTAATT
GGTATTAGTAATAGTAAACAAGTCAATACTCCTGATGTAGTTGAGAGAATCAAAGCCGGAAAGATTACACAAGTAGGTAA
TAATTCTAATGTAGACATAGAAAGGTTATTAGAATTAAATCCTGACTTAGTAACAACTTTTGGAACAGGAAATTCCCAAA
CTGATAGTTATAGCAAACTCACGGAGGCAGGTTTGAAAGTCGGGATAAATGCTGAATATATGGAAGATACGCCATTGGGA
AGAAGTGAATGGTTGAAATTTACGGCTTTGTTTTTTAATCAAGAAGAAAAAGCAGAAAAGATATTTGCAGAAATTACTGA
TAAATATGAACAAGTAGCTCAAAAAGTCAAATCTGTAAAAAACCGTCCAACAGTATTTGTCGGATTTAACTTTAAAGGTA
CTTGGTTTATGCCTGGTGGGAATAGTTACGTAGCGAAATATCTTGCTGATGCTGGAGGTGATTATCTCTGGAGTAATGAG
CAATCTGCTGGTAGTCTACCGCTTTCTTTTGAAGTTGTTTTGGAACGTGCGACAAATGCTGACTATTGGTTGAATTTTAG
CCAATCTTGGCAGAGTTTAAAAGATTTATTAGCTGAAGATAATCGCTATGCTGATTTTAAGTCTGTGAAAATAGGCAATC
TTTATAATAATAATGCCCGTGTTAATGAAAGTGGAGGTAATGATTACTGGGAAGGTGGAATTAGTAACCCAGATATAGTT
TTATCTGACTTAATTAGAATACTGCATCCAGAGATATTACCGAATCATCAATTATTTTATTACCACAAAATTCTTAAATA
A

Upstream 100 bases:

>100_bases
TAATCAAAGGTAACAAAATCACCGAAAACCTCTACCCACCCCAAACCCTCTAATCTCCTTTAAATCTTTGCGTCTACCCT
GCGGGAACACCTTACGGCGA

Downstream 100 bases:

>100_bases
TGTTAAGTGAAAAATATAAATTTAAAAACTCTTTATTAACCCACAATTCTCAAATTATAAAAAGCCTTATTTTCTCAGTT
TTATTAATAGGTTTACTATG

Product: periplasmic-binding protein of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRLLFSFSCRRRWRERERLRRMREIKMIKLPHKKPIIFFCQLFLIATLIIACHQTTIHTSTNTCTPNYNPNQDYFPNKIK
ITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGTPTPQGFKQAQVITVPIHSIVSLSTTHLPHLAKLGVVDKLI
GISNSKQVNTPDVVERIKAGKITQVGNNSNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLG
RSEWLKFTALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRPTVFVGFNFKGTWFMPGGNSYVAKYLADAGGDYLWSNE
QSAGSLPLSFEVVLERATNADYWLNFSQSWQSLKDLLAEDNRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIV
LSDLIRILHPEILPNHQLFYYHKILK

Sequences:

>Translated_426_residues
MRLLFSFSCRRRWRERERLRRMREIKMIKLPHKKPIIFFCQLFLIATLIIACHQTTIHTSTNTCTPNYNPNQDYFPNKIK
ITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGTPTPQGFKQAQVITVPIHSIVSLSTTHLPHLAKLGVVDKLI
GISNSKQVNTPDVVERIKAGKITQVGNNSNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLG
RSEWLKFTALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRPTVFVGFNFKGTWFMPGGNSYVAKYLADAGGDYLWSNE
QSAGSLPLSFEVVLERATNADYWLNFSQSWQSLKDLLAEDNRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIV
LSDLIRILHPEILPNHQLFYYHKILK
>Mature_426_residues
MRLLFSFSCRRRWRERERLRRMREIKMIKLPHKKPIIFFCQLFLIATLIIACHQTTIHTSTNTCTPNYNPNQDYFPNKIK
ITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGTPTPQGFKQAQVITVPIHSIVSLSTTHLPHLAKLGVVDKLI
GISNSKQVNTPDVVERIKAGKITQVGNNSNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLG
RSEWLKFTALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRPTVFVGFNFKGTWFMPGGNSYVAKYLADAGGDYLWSNE
QSAGSLPLSFEVVLERATNADYWLNFSQSWQSLKDLLAEDNRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIV
LSDLIRILHPEILPNHQLFYYHKILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 48700; Mature: 48700

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFSFSCRRRWRERERLRRMREIKMIKLPHKKPIIFFCQLFLIATLIIACHQTTIHTS
CCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECC
TNTCTPNYNPNQDYFPNKIKITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGT
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEECCC
PTPQGFKQAQVITVPIHSIVSLSTTHLPHLAKLGVVDKLIGISNSKQVNTPDVVERIKAG
CCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
KITQVGNNSNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLG
CEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHEECCCCEECCCCCCC
RSEWLKFTALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRPTVFVGFNFKGTWFMPGG
HHHHHEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCC
NSYVAKYLADAGGDYLWSNEQSAGSLPLSFEVVLERATNADYWLNFSQSWQSLKDLLAED
CHHHHHHHHHCCCCEEECCCCCCCCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
NRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIVLSDLIRILHPEILPNHQLFY
CCCCCCCEEEECCEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE
YHKILK
EEECCC
>Mature Secondary Structure
MRLLFSFSCRRRWRERERLRRMREIKMIKLPHKKPIIFFCQLFLIATLIIACHQTTIHTS
CCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECC
TNTCTPNYNPNQDYFPNKIKITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGT
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEECCC
PTPQGFKQAQVITVPIHSIVSLSTTHLPHLAKLGVVDKLIGISNSKQVNTPDVVERIKAG
CCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
KITQVGNNSNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLG
CEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHEECCCCEECCCCCCC
RSEWLKFTALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRPTVFVGFNFKGTWFMPGG
HHHHHEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCC
NSYVAKYLADAGGDYLWSNEQSAGSLPLSFEVVLERATNADYWLNFSQSWQSLKDLLAED
CHHHHHHHHHCCCCEEECCCCCCCCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
NRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIVLSDLIRILHPEILPNHQLFY
CCCCCCCEEEECCEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE
YHKILK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]