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The map label for this gene is psbZ [H]

Identifier: 17231484

GI number: 17231484

Start: 4811378

End: 4811566

Strand: Direct

Name: psbZ [H]

Synonym: asr3992

Alternate gene names: 17231484

Gene position: 4811378-4811566 (Clockwise)

Preceding gene: 17231482

Following gene: 17231485

Centisome position: 75.02

GC content: 43.39

Gene sequence:

>189_bases
ATGACCATAATATTCCAATTTGCTTTGGTAGCGCTTGTGTTGGTGTCTTTTGTCCTAGTTGTGGGCGTGCCTGTTGCTTA
TGCCACTCCACAAAACTGGGTGGAATCTAAAAAGCTCCTTTGGCTTGGTTCCGGTGTTTGGATTGCTTTGGTGCTTTTAG
TCGGATTGTTAAACTTTTTTGTGGTCTAG

Upstream 100 bases:

>100_bases
CTGGTAGCTTACAATTAAGGAAAAACTGTCGGTGTCGCCAGTTACGATATTCTATTTTTAGTACTTTCTTTAGTATTTCG
CTGTCTTGGGAGAAGTCAAA

Downstream 100 bases:

>100_bases
ACAGGCGCTTTGTCTTAGCCAAGATAAATAATATCGACACTACAGGGGCAGGAGAGCCGCCAACACAGGTACAAAATCCA
AGAAAAATTTACCATTTTTT

Product: photosystem II reaction center protein Z

Products: NA

Alternate protein names: PSII-Z [H]

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MTIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFFVV

Sequences:

>Translated_62_residues
MTIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFFVV
>Mature_61_residues
TIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFFVV

Specific function: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. May also aid in binding of psbK, ycf12 and the oxygen-evolving complex to PSII, at least in vitro [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Associated with the photosystem II complex [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002644
- ProDom:   PD004770 [H]

Pfam domain/function: PF01737 Ycf9 [H]

EC number: NA

Molecular weight: Translated: 6803; Mature: 6672

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFF
CHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
VV
CC
>Mature Secondary Structure 
TIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFF
HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
VV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]