| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231469
Identifier: 17231469
GI number: 17231469
Start: 4792361
End: 4792873
Strand: Reverse
Name: 17231469
Synonym: all3977
Alternate gene names: NA
Gene position: 4792873-4792361 (Counterclockwise)
Preceding gene: 17231470
Following gene: 17231468
Centisome position: 74.73
GC content: 47.17
Gene sequence:
>513_bases ATGACAGGCTGGATTAGCTTCTGGATTCAGCTAGTACTCGGCGTTATTTCTGGCATTATTGTGCTACTGTTTGGCATTTT TAGCCAGAGAGCAGGTAGCCCTAATAATAATCCGGGGACTGGCTTTGGGGTGTTTTTAGCGATTTGTGGATTGGTAGTGC TGGGTGGGGGTATTTATTTAGCCTTCCGTTACACCAGAATTGGTAATCAACTGCTATCCTCCAACCCCAGCAACCGACCT CGGAAAGTGGAGACAGTGCAAGTATTACGTTTAGGACTGTGGATAAATTTAGGCGGGACTTTGGTGACATTGTTGGGAGC GCAGGCGATCGTGGGTACACTAGTAGCTAGGTCAATATCTCCCCAAGCTGTCACTACCCAATTATTCGACCCTACCCGCA TCATTAGTGGTCTAGATATGTTGGTAGTTCAGGCGAACATCAATACAGTCTCAGCCCACTTTGCTGGGCTGGTTAGCTCC CTGTGGCTACTCAATCGCATCAACAAATCTTAA
Upstream 100 bases:
>100_bases GCATTTTGTACTAGCCAGTTGGTGAGCAAGCCGTATGTCACGAAATCCCGATGCTCCATCATCTTCTTCTAATCTCCGGA CAATTGCCCAGACGTTCCGG
Downstream 100 bases:
>100_bases ACAAGATTTTTGTATTTGCCTTTCCTGGCATGGCAAGTCAAAATCAGTATATGCTGATGTGTTGGCAAGAAGATACTAGG CGAAAGATTGAGAAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIYLAFRYTRIGNQLLSSNPSNRP RKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLVSS LWLLNRINKS
Sequences:
>Translated_170_residues MTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIYLAFRYTRIGNQLLSSNPSNRP RKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLVSS LWLLNRINKS >Mature_169_residues TGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIYLAFRYTRIGNQLLSSNPSNRPR KVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLVSSL WLLNRINKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18162; Mature: 18031
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHE AFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSIS EHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLVSSLWLLNRINKS CHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHE AFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSIS EHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLVSSLWLLNRINKS CHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA